Cenarchaeum symbiosum: CENSYa_0491
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Entry
CENSYa_0491 CDS
T01380
Name
(GenBank) superfamily II helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
csy
Cenarchaeum symbiosum
Pathway
csy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CENSYa_0491
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csy03019
]
CENSYa_0491
03009 Ribosome biogenesis [BR:
csy03009
]
CENSYa_0491
Enzymes [BR:
csy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CENSYa_0491
Messenger RNA biogenesis [BR:
csy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CENSYa_0491
Ribosome biogenesis [BR:
csy03009
]
Prokaryotic type
rRNA helicases
CENSYa_0491
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA_30
Helicase_C_2
Motif
Other DBs
NCBI-ProteinID:
ABK77124
UniProt:
A0RUV7
LinkDB
All DBs
Position
415609..416913
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AA seq
434 aa
AA seq
DB search
MTKFEELGIKQNVLDALRDMGFEKAFPIQEAAIPVLLTGRDVVGQAHTGTGKTGAYSISM
LQEIKEGGGIQGLIVAPTRELAVQITEEVKKFAKYTKVRPVAIYGGQSMGVQLDALKRGA
EILVATPGRLIDHIKRGSISIDRVTHLVLDEADTMLDMGFIDDIQFILDLTPDEKVMSLF
SATMPIEILRLSEEYLKNPKQFLLDADDLSGEGIDQSYLVIRDREKMDYLVDFIKENGKG
QTIVFCSTKYRTRDVARMLHKRNYGAVAIEGDMSQHRREQSMSRFRTAKAQILVATDVAA
RGIDVPRVALVVNYDVPNQEMIYFHRIGRTARAGAKGRAITLVSYSSVSEFDVIKRQIKA
KVTYLNDEMGIVVKIPDPLKRESARRRGGPQRLGQRRQSRERSDPRDERRRSARRKSGAI
RHGPGYYRGLKSRW
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaattcgaggaactggggataaagcagaacgtgctagacgcgctgcgcgacatg
ggctttgaaaaggcctttcccatacaggaggccgcaatacccgtattgctcacgggccgg
gacgtggtgggccaggcccacaccggcaccggcaagaccggggcgtactcgatatcgatg
ctccaggagatcaaggaaggcgggggcatccagggcctgatagtggcgcccacccgggag
ctcgcagtccagatcaccgaagaggtgaaaaagtttgcaaagtatacaaaggtgcggccc
gtcgctatctacgggggccagagcatgggcgtccagctcgacgcgctcaaaaggggcgcc
gagatcctggtcgccacaccgggcaggctgatagaccacatcaagcggggctccatatcg
atagacagggtgacgcacctggtcctcgacgaggcagatacgatgctcgacatgggcttt
atcgacgacatacagttcatactcgatcttaccccggacgaaaaggtcatgtcgctcttc
tcggccaccatgccgatagagatcctgcggctatccgaagagtacctaaagaaccccaag
cagttcctgctcgatgcagacgacctgagcggcgagggcatagaccagtcgtatctggtc
ataagggaccgcgaaaagatggactatctggtcgactttatcaaggagaacggcaagggg
cagaccatagtattctgctctacaaagtacaggacccgggacgtggcccggatgctgcac
aagagaaactatggcgcggtggccatcgagggtgatatgtcacagcaccgcagggagcag
tcgatgtcgcggttcaggaccgccaaggcgcagatactcgtcgctaccgacgtggcggcc
agggggatagatgtgccccgcgtggcgctggtggtcaactatgatgtgcccaaccaggag
atgatctactttcacaggataggcaggaccgccagggccggcgcaaagggccgggccata
acgctcgtctcatattcttcagtatccgagttcgatgtgataaagcgtcagataaaggcc
aaggtgacctatctaaatgatgaaatgggcatagtcgtaaagatacccgacccgctaaag
agggagtcggcgcggaggcgcgggggcccgcagaggctcggccagcggcggcagtcccgg
gagaggtcagatccccgagacgagcggcgccggtctgctcggcgcaagtcgggtgcaatc
cggcacggcccggggtactatcgcggcctcaagagccgctggtag
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