Cenarchaeum symbiosum: CENSYa_1073
Help
Entry
CENSYa_1073 CDS
T01380
Name
(GenBank) conserved hypothetical protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
csy
Cenarchaeum symbiosum
Brite
KEGG Orthology (KO) [BR:
csy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
csy03016
]
CENSYa_1073
Enzymes [BR:
csy01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
CENSYa_1073
Transfer RNA biogenesis [BR:
csy03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
CENSYa_1073
Prokaryotic type
tRNA splicing ligases
CENSYa_1073
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
ABK77703
UniProt:
A0RWI6
LinkDB
All DBs
Position
1115891..1117270
Genome browser
AA seq
459 aa
AA seq
DB search
MNVPVRIFADEGLVSKMQSDRTIKQAANVAAMPGIVGHVVVLPDGHEGYGFPVGGVAAMD
AKEGMISPGGVGYDINCGVRLLRTNLTEKETRPKLKELVVDLFSSIPSGVGSKGAVRLDR
AQLDEVLTGGVGWAVKNGYGNRNDADACEEGGRMDGADPGKISDRARKRGMPQLGSLGSG
NHFLEVQRVDEIHDEEAASRMGIEKGQVTILTHCGSRGFGHQVCSDYLRTSERATSKYNI
SLKDRELACVPNHSEEGESYRGAMAAALNFAWCNRQMISHWTRATFERVMGMSAEDLGMD
LVYDVSHNIAKVERHRIDGKEKDVVVHRKGATRAFPAGRNELPSRYRDLGQPVFIPGSMG
TASWILLGKPGSMELTFGSTAHGAGRTMSRSRARREHTEEGVKKELAGRGVFVKSLTKDG
VVEEAPDAYKDVDRIAGVSHDLDIATKVARLVPIGVIKG
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtgcccgtccgcatatttgcagacgaagggctcgtctccaagatgcagtcggac
aggaccataaaacaggcggcaaacgtggcagccatgcccgggattgtaggccacgtggtg
gttcttccagacggccatgaagggtacggctttccagtcggaggagttgccgcaatggac
gccaaagaaggcatgataagccccgggggcgtaggatacgacatcaactgcggggtcagg
ctgctccggaccaaccttaccgaaaaagagacaaggccaaaactcaaagagttggtagtc
gacctgttcagctcgataccatcaggtgtaggctccaaaggggcagtcaggctggaccgt
gcccagctcgatgaagtgctgactggcggagtaggatgggccgtgaagaacggctacggg
aatagaaatgatgccgacgcctgcgaggagggaggccgcatggatggcgccgacccgggc
aagatatccgacagggccagaaaaagaggcatgccgcagctgggcagcctaggttcgggc
aaccactttctcgaagtacaaagggtagacgagatccacgatgaagaggccgcgagcaga
atgggcatagaaaaaggccaggtgaccatacttacccactgcgggtcgaggggctttggg
caccaggtatgcagcgactacctgcggacctccgagagggccacctcaaagtacaacata
tccctaaaggacagggagcttgcctgcgtgccgaaccattcagaagagggggaatcgtac
cgcggggcgatggctgcagcactcaactttgcgtggtgcaacaggcagatgatctcccac
tggacgagggccacatttgaaagggtcatgggtatgtcggctgaagaccttggcatggat
ttagtatacgatgtatcccacaacatagcaaaggtagaaaggcacagaatagacggcaaa
gaaaaagacgtggtcgtgcacagaaaaggcgccaccagggcgtttcctgccggcaggaac
gagcttccttcacggtacagggacttgggccagcccgtcttcataccgggttccatgggg
actgccagctggatactgctgggcaagccgggttccatggagctcacctttggctcgaca
gcccacggagcaggcaggacgatgtcccgctcgagggcccggcgcgagcataccgaagag
ggcgtaaaaaaggagcttgccggccgcggcgtattcgtaaagtcgctcacaaaagacggg
gtagtcgaggaggcgcccgacgcgtacaaggatgtcgacaggatagccggggtctcgcac
gatcttgacatagccacaaaggtggccaggcttgtccccataggggtgatcaagggatga
DBGET
integrated database retrieval system
