Cenarchaeum symbiosum: CENSYa_1134
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Entry
CENSYa_1134 CDS
T01380
Name
(GenBank) superfamily I helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
csy
Cenarchaeum symbiosum
Pathway
csy03420
Nucleotide excision repair
csy03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
csy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CENSYa_1134
03430 Mismatch repair
CENSYa_1134
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csy03400
]
CENSYa_1134
Enzymes [BR:
csy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CENSYa_1134
DNA repair and recombination proteins [BR:
csy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CENSYa_1134
MMR (mismatch excision repair)
Other MMR factors
CENSYa_1134
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
AAA_30
AAA_11
Motif
Other DBs
NCBI-ProteinID:
ABK77762
UniProt:
A0RWP5
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All DBs
Position
1161093..1163843
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AA seq
916 aa
AA seq
DB search
MACPGSGKTETVSRRIAELIKKGAAPSKIVAFTFTNRAADSLRFRINRVVSAECGRVDDL
GSMYVGTIDSYCLQLLKELKPEYRPFEILDEAKQAAFVDRWYLNIGLRDIETGRGRWDTL
EKFCRTVGIVQNERLDVKSLHNKDFVRCYRNYAGKLEDEKFFDFSSVVHMLLGVLENDAG
ATDRLNSMVEHVVFDEYQDVNHIQEDLLSVLSKVSDSVCVVGDDDQNIFNWRGSNFRHIR
EFDAKYDKYGMTVLPLNTNYRSTGHIIKAAASLIQNNLGRLEKDMRPFEGQNLRYDGGDI
VHGHFETDLEEFGYIEKTMKSLFGTDFTDKFGGKYALSYADMAVLVRTNKDASRITKYLE
EHGIPVAADSSASGAFETPVVKLALDCLFYAFNCPGMDGEDAPLAEDLCARYKEIIGKEP
RQFAEGLGSIHRRVGNMLAKTPSGYLPDMGLQEFFQRILNAMGLESGLLKKHLHDLGVLS
TAISDYEYVYQTIRAWDVPGFRYFVKEVGRRVYPDRIYNSVSPVDAVRVMTIWKAKGLEF
PAVFVPTFVKFRKIPLRSNFLDPGEFDKGLYTGDKESARRVYYTAVTRSQKYLFLTGATW
QEIAVGKKPSKGKRKHPFISEMGGHLSEPSDMVRAKSSHGPREPEDGVLVASYRELSTYG
RCPHDFFFENVAGFKRGILPASGYVTSMHNILGIIHEKYARSGKIPDPGELEAIIDETFH
LRFAPLPMLNGMKKKAVGRIRRYLDKHADEIQGILEVEKRFEVGMDKTLVTGVIDLLRIH
EGDDGRAEVADFITEGERGYYESDHHERVKFGTYAALQTLGLKPGRSIIHYLDRDEKDYV
DISDEELKYAAHNVGLRAQGIHDRNFDATPSETKCRSCDFRAICDKKDFTVGVDFDAADY
ARREGPARGADAHTTR
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
gtggcatgtcccggttccggaaagacggagaccgtgagccggcggatcgcagagctcatc
aaaaagggggctgccccgtcaaagattgtggcatttacctttaccaacagggccgccgac
agcctgcggtttaggataaacagggttgtgtcggcagagtgcggcagggtggatgatctg
ggctcgatgtatgtaggcaccatcgattcgtactgcctgcaactgttaaaagaattaaaa
ccagagtacaggccgtttgagatactcgacgaggcaaagcaggcggcatttgtcgacaga
tggtacctcaacatagggctgagggacattgaaaccgggaggggcaggtgggacaccctt
gaaaagttttgcaggaccgttggcatcgtccaaaatgagaggcttgatgtcaaatcactg
cacaacaaggactttgtacgttgctatagaaactatgcgggaaaactcgaggatgaaaag
ttctttgacttttcttccgtcgtgcacatgctgcttggcgtgcttgaaaacgatgccggg
gccacggaccggctgaattccatggtggagcatgtcgtgtttgacgagtatcaggatgtg
aatcacatacaggaggatctgttgtcggtgctctcaaaggtctccgattctgtctgtgtc
gtaggagacgacgaccagaacatattcaactggcgcggcagcaacttcaggcacatacgt
gaatttgatgcaaaatatgacaaatatgggatgacggtcctccccctgaacaccaactac
cgttccacagggcatatcatcaaagccgccgccagtctaatccagaacaacctcggcagg
ctggaaaaagacatgcggccatttgagggccagaacctccggtatgatggcggggacatt
gtgcacggacattttgagacggatctcgaggagttcggatacatcgaaaagaccatgaag
tccctttttgggaccgactttaccgacaagttcgggggcaaatatgccctgtcttacgcg
gatatggcggtgctggtcaggacaaacaaagatgcatccaggataacaaagtatctggaa
gagcacggcatacccgtcgcggccgacagctctgcaagcggagcctttgagactccggtg
gtgaagcttgccctggactgcctgttctatgcgttcaactgcccgggcatggacggcgag
gatgcgccgctagcagaggacctgtgtgcaagatacaaggagatcattggaaaggagccc
cggcaatttgcggagggcctgggcagcatacataggcgggtgggcaatatgctggcaaag
acacctagtggctacctgccggacatgggcctgcaggagtttttccaaagaatcctcaat
gcgatggggctggaatcagggctgttgaagaaacacctgcatgacctgggagtgctgagc
acggcgatatccgattacgagtacgtgtaccagacaataagggcgtgggatgtgcccggg
tttaggtattttgtaaaagaagtaggcaggagggtgtacccggatcggatctacaacagc
gtcagcccggtagacgcggtgcgcgtaatgaccatatggaaggccaaaggcctcgagttt
cccgcggtgtttgtgcccacgttcgtaaaattcagaaaaataccgctgaggtccaacttt
cttgatccgggcgaatttgacaaggggctctacaccggggacaaagagtccgcgcgcagg
gtatactataccgcagtgactcgatcacaaaagtatttgttcctgaccggggcaacctgg
caggagattgcggtgggaaagaaaccatccaagggcaaacgtaagcatcccttcatatcc
gagatgggcggacacctgtcagagccctccgacatggtgcgggcaaagtcatctcacggg
ccccgggaaccggaggacggcgtgcttgtcgcatcatacagggagctgagcacgtatggc
aggtgcccgcatgattttttctttgaaaacgtggccggttttaagagggggattctgccg
gccagcgggtatgtgactagcatgcacaacatactgggcatcatacatgagaagtatgca
cggagtggaaaaataccggatccgggcgaactcgaggccataattgacgagacattccac
ctgcggtttgcgcccctgcccatgctcaatggcatgaagaaaaaggctgtcgggagaatc
aggaggtaccttgacaagcacgcggatgaaatacagggcatccttgaggtcgagaagagg
tttgaggtcggcatggataagacactggtaaccggcgtcatagacctgcttagaatccat
gaaggtgacgatggcagggcggaggtagctgatttcataacagagggcgaacggggatat
tacgaatcggatcatcatgaaagggtaaagtttggcacgtatgcggcgcttcagacgctg
ggcctcaagcccggcaggtcgataatccactatctggaccgcgacgaaaaggactatgtg
gacataagcgatgaagaactcaagtatgccgcgcacaatgttggtttgcgcgcccaggga
atacatgataggaattttgacgccactcccagcgagacaaaatgccgaagctgtgatttc
cgggccatctgtgacaaaaaggactttacggtgggcgtggactttgatgccgcagattat
gcaaggagggaggggccggccaggggcgcggatgcgcatactacgagatag
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