Cenarchaeum symbiosum: CENSYa_1136
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Entry
CENSYa_1136 CDS
T01380
Name
(GenBank) tRNA splicing endonuclease
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
csy
Cenarchaeum symbiosum
Brite
KEGG Orthology (KO) [BR:
csy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
csy03016
]
CENSYa_1136
Enzymes [BR:
csy01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
CENSYa_1136
Transfer RNA biogenesis [BR:
csy03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
CENSYa_1136
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
tRNA_int_end_N2
Motif
Other DBs
NCBI-ProteinID:
ABK77764
UniProt:
A0RWP7
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All DBs
Position
1164797..1165360
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AA seq
187 aa
AA seq
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MEQEAEPQVEGELSRDLAIISDDSMRHELETRGYGEVDKKRFYLRPFESLYLLFYGRLKL
AKSGKAIGFESMLQVARKYDDDVLTKFLIYRDLRIRGYVAKEGFGFGTDLRAYDRGRFGE
KASKYVVFGLKEGTQEKIGALQKKVAKITQMGKEPIIAVIERRGEVIYYKVSRIEFPPNK
TAEPAVF
NT seq
564 nt
NT seq
+upstream
nt +downstream
nt
ttggagcaggaggccgagccgcaggtcgaaggagagctgtccagggaccttgcgataata
tccgatgacagcatgcgccacgagctcgagacaaggggctatggagaagtggacaaaaag
aggttctatctgaggccctttgaatcgctgtacctgctgttctatggcaggctcaagctg
gcaaagtccggcaaggcaataggctttgagagcatgttgcaggtggcaagaaaatacgac
gatgacgtgctgacaaagtttctcatatacagggatctgagaatccgcgggtacgtggca
aaggaggggtttggctttgggacggacctgcgcgcatacgacaggggccgctttggcgaa
aaggcctcaaagtatgtggtctttgggctaaaggagggcacccaggaaaagataggcgcc
ctgcagaaaaaggtggcaaagataacccagatgggcaaagagccgataatagccgtcata
gaaaggaggggcgaggtcatatactacaaggtatccaggatagagttccccccgaacaag
accgccgagccggctgtgttctag
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