Cenarchaeum symbiosum: CENSYa_1536
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Entry
CENSYa_1536 CDS
T01380
Name
(GenBank) RNase PH
KO
K11600
exosome complex component RRP41
Organism
csy
Cenarchaeum symbiosum
Pathway
csy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CENSYa_1536
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csy03019
]
CENSYa_1536
Messenger RNA biogenesis [BR:
csy03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
CENSYa_1536
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
CENSYa_1536
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-ProteinID:
ABK78158
UniProt:
A0RXU1
LinkDB
All DBs
Position
complement(1548127..1548858)
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AA seq
243 aa
AA seq
DB search
MGGRDTDVVLLDENGIRCDGRKISETRRVEITAGVLNNANGSAYIEFGDNKILAGIFGPR
DVHPKHMVRTETGILRCRYHMSPFSVSERKKPAPSRREIEISKVIKEALEPSLMLEQFPR
TAVDVFIEVLQADGGSRCAALAAASVALADAGIPMRDMVSACAAGKVADTIVLDVNNEED
QAGQADMPVGYMPNLDQVTLIQLDGVLTPDEYSRCAAMAIDGCKQVYEVQKKALSDRFFG
GGE
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atggggggtagagacacggatgttgtactgcttgatgagaacggcatccgatgcgacgga
aggaagataagcgagacccggcgggttgagatcactgccggcgtgctcaacaatgcaaac
ggctccgcgtatatagaatttggcgacaacaagattttagcgggcatattcggcccccgc
gacgtgcacccaaagcacatggtgaggaccgagaccggcatactgcgctgcaggtatcac
atgtcgcccttttccgtatccgagaggaaaaagcccgcgccctcccggcgggagattgag
atatccaaggtgataaaggaggcgctagagccgtccctcatgctagaacagttcccccgg
acggcagtcgatgtattcatagaggtgctccaggctgatggcggctccaggtgtgctgcg
cttgcagccgcatccgtggcccttgcagatgctggaataccaatgcgggacatggtcagc
gcatgcgccgcaggcaaggtggcagataccatagtcttggatgtaaacaacgaggaggac
caggcgggccaggccgacatgcccgtcggatatatgccgaacctcgaccaggtcacgctg
atacagcttgacggggtgctcacacccgacgagtattcccggtgcgccgccatggcaata
gacggctgcaagcaggtatacgaagtgcagaaaaaggcgctatccgacaggttctttggg
ggcggggaataa
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