Carlito syrichta (Philippine tarsier): 103249208
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Entry
103249208 CDS
T07836
Symbol
ERCC2
Name
(RefSeq) LOW QUALITY PROTEIN: TFIIH basal transcription factor complex helicase XPD subunit
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
csyr
Carlito syrichta (Philippine tarsier)
Pathway
csyr03022
Basal transcription factors
csyr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
csyr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
103249208 (ERCC2)
09124 Replication and repair
03420 Nucleotide excision repair
103249208 (ERCC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csyr03021
]
103249208 (ERCC2)
03036 Chromosome and associated proteins [BR:
csyr03036
]
103249208 (ERCC2)
03400 DNA repair and recombination proteins [BR:
csyr03400
]
103249208 (ERCC2)
Enzymes [BR:
csyr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
103249208 (ERCC2)
Transcription machinery [BR:
csyr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
103249208 (ERCC2)
Chromosome and associated proteins [BR:
csyr03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
103249208 (ERCC2)
DNA repair and recombination proteins [BR:
csyr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
103249208 (ERCC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
HBB
ResIII
DEAD
AAA_22
SNF2-rel_dom
Motif
Other DBs
NCBI-GeneID:
103249208
NCBI-ProteinID:
XP_021563115
Ensembl:
ENSTSYG00000026723
UniProt:
A0A3Q0DLY2
LinkDB
All DBs
Position
Unknown
AA seq
738 aa
AA seq
DB search
MQGHGVLEMPSGTGKTVSLLALIMAYQRAYPLEVTKLIYCSRTVPEIEKVIEELRKLLNF
YEKQEGEKLPFLGLALSSRKNLCIHPEVTPLRFGKDVDGKCHSLTASYVRAQYQQDASLP
HCRFYEEFDVHGREVPLPAGIYNLDDLKALGRRQGWCPYFLARYSILHANVVVYSYHYLL
DPKIADLVSKELARKAVVVFDEAHNIDNVCIDSMSVNITRRTLDRCQSNLETLQRTVLRX
GIRRAGAGGAAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRLL
EFVKWGVRVQHVVQESPPAFLSGLAQRVCIQRKPLRFCAERLRSLLHTLEIADLADFSPL
TLLANFATLVSTYAKGKLTSSFCHCWTSLQKSGQADGPQLEDGALLLTQVSVHSCMDASL
AIKPVFERFQSVIITSGTLSPLDIYPKILDFHPVTMATFTMTLARVCLCPMIIGRGNDQV
AISSKFETREDIAVIRNYGNLLLEMSAVVPDGIVAFFTSYQYMESTVASWYEQGILENIQ
RNKLLFIETQDGAETSVALEKYQEACENGRGAILLSVARGKVSEGIDFVHHYGRAVIMFG
VPYVYTQSRILKARLEYLRDQFQIRENDFLTFDAMRHAAQCVGRAIRGKTDYGLMIFADK
RFARADKRGKLPRWIQEHLTDANLNLTVDEGVQVAKYFLRQMAQPFHREDQLGLSLLSLE
QLESEETLRRIEQIAQQL
NT seq
2217 nt
NT seq
+upstream
nt +downstream
nt
atgcagggtcatggagtcttggagatgccatcaggtactgggaagacagtgtccctgttg
gccctaatcatggcataccagcgggcgtatccgctggaggtgaccaagctcatctactgc
tcgaggactgtgccggagatcgagaaggtgattgaagagcttcgcaaattgctcaacttc
tacgagaagcaggagggtgagaagctgccgtttttgggactggctctgagctcccgcaaa
aacttgtgtattcaccctgaggtgacacccctgcgctttgggaaggatgtggacgggaaa
tgccacagcctcacagcctcctatgttcgggcacaataccagcaggatgccagcttgcct
cactgccgcttctatgaggaatttgacgtccatgggcgtgaggtgccgctccctgctggc
atctacaacctggatgacctgaaggccctgggaagacgccagggctggtgcccctacttc
cttgcccgctactcgatcctgcatgccaacgtggtggtgtacagctaccattacctcctg
gaccccaagatcgcagacctggtgtccaaggagctggcccgcaaggccgtggtggtcttt
gacgaggcccacaacattgacaacgtctgcatcgattccatgagcgtcaacatcacgcgc
cggaccctggaccggtgccagagcaacctggagaccctgcagaggacggtgctcaggntg
gggatcaggcgggccggggccggtggcgctgcggccgcccnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnggcggcgcctgctg
gagttcgtcaagtggggggtgcgcgtgcagcacgtggtgcaggagagccccccggccttc
ctgagcggcctggcccagcgcgtgtgcatccagcgcaagcccctcaggttctgtgctgag
cgcctccgctccctcttgcacaccctggagattgctgacctcgccgacttctcccccctc
accctccttgctaactttgctactctcgtcagcacctacgccaagggtaagctcacctcc
tcgttctgccactgctggacctccctgcagaaatcaggtcaggctgatggcccgcagctg
gaggatggggccctgctcctcacccaggtctctgtccacagctgcatggacgcctcgcta
gccatcaaacccgtgttcgagcgcttccagtctgtcatcatcacatccgggacgctgtcc
ccgctggacatctaccccaagatcctggacttccaccccgtcaccatggcgaccttcacc
atgacgttggcccgggtctgcctctgccccatgatcatcggccgtggcaatgaccaggtg
gccatcagctccaagtttgagacccgggaagatattgcggtgatccggaactacgggaac
ctcctgctggagatgtccgcggtggtccccgatggcatcgtggccttctttaccagctac
cagtacatggagagcaccgtggcctcctggtacgagcagggcatccttgaaaacatccag
aggaacaagctgctctttatcgagacccaggacggggctgagaccagtgtcgctctggag
aaataccaggaggcctgcgagaacggccgcggagccatcctgctctcggtggcccggggc
aaggtgtctgagggaatcgactttgtgcaccactatggacgggctgtcatcatgtttggt
gtcccctacgtctatacccagagccgaattctcaaggcacggctggaatacctgcgggac
cagttccagatccgagagaatgactttctcacctttgacgccatgcgccacgcggcccag
tgtgtgggtcgggccatccggggcaagaccgactatggcctcatgatctttgccgacaag
cggtttgcccgggcagacaagcgggggaagctgcctcgctggatccaggagcacctcaca
gacgccaacctcaacctgaccgtagatgagggcgtccaagtggccaagtacttcctgagg
cagatggcacagcccttccaccgggaggatcagctgggcctgtccctgctcagtctggag
cagctggagtcagaggagacgctgcggaggatagagcagattgcccagcagctgtga
DBGET
integrated database retrieval system
