Carlito syrichta (Philippine tarsier): 103249231
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Entry
103249231 CDS
T07836
Symbol
DHX16
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
csyr
Carlito syrichta (Philippine tarsier)
Pathway
csyr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csyr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103249231 (DHX16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csyr03041
]
103249231 (DHX16)
Enzymes [BR:
csyr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
103249231 (DHX16)
Spliceosome [BR:
csyr03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
103249231 (DHX16)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
DEAD
WHD_HA2
AAA_22
AAA_30
AAA_19
SecA_DEAD
Flavi_DEAD
nSTAND3
SRP54
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
103249231
NCBI-ProteinID:
XP_008046070
Ensembl:
ENSTSYG00000029805
UniProt:
A0A1U7SKM0
LinkDB
All DBs
Position
Unknown
AA seq
1043 aa
AA seq
DB search
MATPAGLERWVQDELHSVLGLSERHVAQFLIGTAQRCASAEEFVQRLRDTDTLDLSGPAR
DFALRLWNKVPRKAVVEKPARAAEREARALLEKNRSYKLLEDSEESSEETVGRAGSSLQK
KRKKRKHLRKKRQEEEEEEEEEASEKEKKTGGSKQQKEKPESEDEWERTERERLQDLEER
DAFAERVRQRDKDRTRNVLERSDKKAYEEAQKRLKMAEEDRKAMVPELRKKSRREYLAKR
EREKLEDLEAELADEEFLFGDVELSRHERRELKYKRRVRDLAREYRAAGEQEKLEATNRY
HMPKETRGQPARAVDLVEEESGAPGEEQRRWEEARLGAASLKFGARDAASQEPKYQLVLE
EEETIEFVRATQLQGDEEPSAPPPSTQAQQKESIQAVRRSLPVFPFREELLAAIASHQVL
IIEGETGSGKTTQIPQYLFEEGYTKKGMKIACTQPRRVAAMSVAARVAREMGVKLGNEVG
YSIRFEDCTSERTVLRYMTDGMLLREFLSEPDLASYSVVMVDEAHERTLHTDILFGLIKD
VARFRPELKVLVASATLDTARFSAFFDDAPVFRIPGRRFPVDIFYTKAPEADYLEACVVS
VLQIHVTQPPGDILVFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDMQAR
IFQPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKAS
ANQRAGRAGRVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLMHF
DFLDPPPYETLLLALEQLYALGALNHLGELTTSGRKMAELPVDPMLSKMILASEKYSCSE
EILTVAAMLSVNNSIFYRPKDKVVHADNARVNFFLPGGDHLVLLNVYTQWAESSYSSQWC
YENFVQFRSMRRARDVREQLEGLLERVEVGLSSCQGDYIRVRKAITAGYFYHTARLTRSG
YRTVKQQQTVFIHPNSSLFEQQPRWLLYHELVLTTKEFMRQVLEIESSWLLEVAPHYYKA
KELEDPHAKKMPKKIGKTREELG
NT seq
3132 nt
NT seq
+upstream
nt +downstream
nt
atggcgacccccgcggggttggagcgctgggttcaggacgagctgcactcggtgctgggt
ctgagcgagcggcacgtcgcccagttcctgatcggtaccgcgcagcgctgcgcctcggcc
gaggagttcgtgcagcgcctgcgagacaccgacaccttggacctcagcggaccggcgcgg
gacttcgccctgagactctggaacaaggtaccaaggaaggcggtagtagaaaagccagct
cgagcagcagagcgagaggcccgagccctgctagagaagaaccgatcttataagttgctg
gaagacagtgaggaaagtagtgaggaaactgtaggtagggctgggagcagcctccaaaag
aagcgaaaaaaacggaaacacctcaggaaaaagcgccaggaggaggaggaagaagaggag
gaagaggcttctgagaaagagaagaagacagggggaagtaaacagcagaaggagaagcca
gagtcggaggatgagtgggaacggacagagcgggaacgccttcaggacctggaggaacgt
gatgcttttgccgagcgagttcggcagcgggacaaggatcggactcgaaatgtcctggag
cggtcagacaagaaggcttatgaagaggctcagaagcgcctcaagatggctgaagaagac
cggaaagccatggtccccgagctgcggaagaaatcccgccgagagtatctggctaagaga
gagcgagagaagctggaggacctggaggcagaactagctgacgaggagttcctttttggg
gatgtggagctgagccgtcatgagcggcgggagctcaaatacaagcggcgagtgcgggat
ctggcccgcgagtaccgggcagctggggagcaggagaagctagaggctacaaatcgctac
cacatgcccaaggaaacccgaggacagccagctcgagctgtggatctagtggaggaggaa
tcaggcgcccctggggaggaacagcggcgctgggaggaggcccggcttggggcagcttcc
ctgaagtttggggctcgagatgctgcctcccaggagcccaagtatcagctggtgctggaa
gaggaggagaccattgaatttgtccgggctactcagctccagggtgacgaggagccatca
gctccacccccttcaacccaggcccagcagaaagagtccatccaggccgtccgccgcagc
ctcccagtgttcccgtttcgcgaggagctcctggctgctattgccagtcatcaagtcctc
atcattgaaggcgagacaggctcagggaagaccacccaaatcccacagtatctctttgag
gagggttacacaaagaagggtatgaagattgcctgtacccagccccggagagtggcagcc
atgagtgtggcggcccgtgtggcccgggagatgggtgtgaagctcggaaatgaggttggc
tacagcatccgttttgaagactgcacatcagagcgaactgtcctccgctacatgacagat
gggatgcttcttcgggagttcctctctgagcctgaccttgcgagttacagcgtggtgatg
gtagatgaggctcatgaacggaccctacacacagacattctctttggattgatcaaggat
gttgctcgcttccgacctgagcttaaggtcctggtggcttcagccacactggacaccgcc
cgtttctccgccttctttgatgacgcccctgtgttccgaatccctggacgcaggtttcca
gtggacattttctataccaaggctccagaggctgactacttggaagcctgtgttgtgtct
gtgttacaaattcatgtgacccagcctcccggggatatcctggtgttcctgacaggacag
gaggagattgaggctgcctgtgagatgctccaggatcgctgccgccgcctgggctccaaa
atccgggagctcctggtgctacccatttatgccaacctgccctctgatatgcaggctcgt
atcttccagcccacaccccctggggcacgaaaggtggttgtggcaacaaatattgctgag
acatcgctcaccatcgagggcatcatttatgtgctggatccagggttctgtaagcaaaag
agctataacccccgcacaggcatggaatcactcactgtcacaccctgcagcaaggcctca
gctaatcagcgagctggcagggcgggtcgggtggctgcagggaaatgcttccgcctgtat
actgcctgggcctatcagcatgagcttgaggaaaccacggtgcctgagatccagaggacc
agcttgggcaatgtcgtgttgctgctcaagagcttaggtatccatgacctaatgcacttt
gatttcctggaccctccaccatatgagaccctactgttggctttagaacagctgtatgct
ctgggagccctcaaccaccttggggaactcaccacgtctggtcgaaagatggcagagctg
ccagtggaccccatgctgtctaaaatgatcttggcctctgagaagtacagctgttcagag
gagatcctgacagtggctgccatgctgtctgttaacaactccattttctaccgacccaag
gacaaggttgtccatgctgacaatgcacgcgtcaacttcttcctccctggtggcgaccac
ctggttctgctaaatgtttacacacagtgggctgagagcagttactcttcccagtggtgc
tatgagaactttgtacagtttcgatccatgcgccgagcccgggatgtgcgggaacagctg
gagggacttttggaacgcgtcgaagttggtctcagctcttgtcagggggactatattcgt
gtacgcaaggccatcactgccggttacttttaccacacagcacggttgactcgtagtggc
taccgcacagtgaagcagcagcagacggtgttcattcatcccaactcctctctctttgag
caacagccacgctggctgctctaccatgaacttgtcttgaccaccaaggagttcatgaga
caggttttggagatcgagagcagttggcttctggaagtggctccccactattataaggcc
aaggagctggaagatccccatgctaagaaaatgcccaaaaaaataggcaagacacgagaa
gagctagggtaa
DBGET
integrated database retrieval system
