KEGG   Carlito syrichta (Philippine tarsier): 103252042
Entry
103252042         CDS       T07836                                 
Symbol
THOC6
Name
(RefSeq) THO complex subunit 6 homolog isoform X1
  KO
K13175  THO complex subunit 6
Organism
csyr  Carlito syrichta (Philippine tarsier)
Pathway
csyr03013  Nucleocytoplasmic transport
csyr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:csyr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    103252042 (THOC6)
  09122 Translation
   03013 Nucleocytoplasmic transport
    103252042 (THOC6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csyr03019]
    103252042 (THOC6)
   03041 Spliceosome [BR:csyr03041]
    103252042 (THOC6)
Messenger RNA biogenesis [BR:csyr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     103252042 (THOC6)
Spliceosome [BR:csyr03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    103252042 (THOC6)
SSDB
Motif
Pfam: WD40_WDHD1_1st WD40 Beta-prop_WDR3_1st Beta-prop_IFT122_1st Beta-prop_THOC3 Beta-prop_WDR5 WD40_Prp19 Beta-prop_WDR36-Utp21_2nd WDR55 Beta-prop_NOL10_N WD40_CDC20-Fz Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd Beta-prop_EML Beta-prop_EML_2 WD40_Gbeta NBCH_WD40 Beta-prop_WDR36-Utp21_1st WDR54 Beta-prop_IP5PC_F Beta-prop_CAF1B_HIR1 EIF3I TRM82_WD WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st DSE1_N ASA1 Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_EIPR1 Beta-prop_DCAF4 Beta-prop_VPS8 Beta-prop_SCAP Beta-prop_Vps41 Beta-prop_SPT8 WD40_RFWD3 PAC11
Other DBs
NCBI-GeneID: 103252042
NCBI-ProteinID: XP_008048823
Ensembl: ENSTSYG00000030424
UniProt: A0A1U7SXD4
LinkDB
Position
Unknown
AA seq 341 aa
MERAVPLAVPLGQAEVFQALQRLHMTIFSQSVSPCGKFLAAGNNYGQIAVFSLSAALSSE
AKEESKKPVVTFQAHDGPVYSMVSTDRHLLSAGDGEVKAWLWVEMLKKGCKELWCHQPPY
RTSLEVPEINALLLIPKENSLLLAGGDCQLHVMDLETGTFTRALRGHTDYIHCLALRERS
PEVLSGGEDGAVRLWDLRNSKEVQTIEVYKHEECSRPHNGRWIGCLATDSDWMVCGGGPA
LTLWHLRSSTPTTIFPMRAPQKHVTFYQDLILSAGQGCCVNQWQLSGELKAQVPGSSPGL
LSLSLNQQPTAPECKVLTAAGNSCRVDVFTNLGYRAFSLSF
NT seq 1026 nt   +upstreamnt  +downstreamnt
atggagcgcgctgtgccgctcgcggtgcctctgggtcaggctgaggtgtttcaggccctt
cagcggctgcacatgaccatcttctcccagagtgtctcaccctgtgggaagttcctggca
gctggcaacaattacgggcagattgctgtcttcagcttgtctgctgctttgagttcagag
gccaaagaggaaagtaaaaagcctgtggtgaccttccaagcccacgatggacctgtctac
agcatggtctccaccgatcgacatctgctcagtgctggggacggggaggtgaaggcctgg
ctgtgggtggagatgctcaagaagggctgtaaggaactgtggtgtcatcagcccccatac
aggaccagcttggaagtgccggagatcaatgctttgctactcatccccaaggagaattcc
ctcctcctggcggggggtgactgccagttgcacgttatggatcttgaaactgggaccttc
acgcgggcccttcggggtcacacggactacatccattgcctggcactgcgggaacgaagc
cctgaggtgctgtcgggtggcgaggatggggccgtacgactctgggacctccgcaattca
aaggaggtccagaccatcgaggtctataagcacgaggagtgctcgaggcctcacaatgga
cgctggatcggatgtttggcaactgactcagactggatggtctgtggagggggcccagcc
ctcaccctctggcacctccgatcctccacacccaccaccatctttcccatgcgggcaccg
cagaaacatgtcaccttctaccaggacctgatcctgtcagctggccagggctgctgtgtc
aaccagtggcagctcagcggggagctgaaggcccaggtgcctggctcctcccctgggctg
ctcagcctcagcctcaaccagcagcccacagcgcccgagtgcaaggtcctgacagctgca
ggcaacagctgccgcgtggatgtcttcaccaacctgggctaccgagccttttccctgtcc
ttttga

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