Carlito syrichta (Philippine tarsier): 103252247
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Entry
103252247 CDS
T07836
Symbol
XAB2
Name
(RefSeq) pre-mRNA-splicing factor SYF1
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
csyr
Carlito syrichta (Philippine tarsier)
Pathway
csyr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csyr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103252247 (XAB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csyr03019
]
103252247 (XAB2)
03041 Spliceosome [BR:
csyr03041
]
103252247 (XAB2)
Messenger RNA biogenesis [BR:
csyr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
103252247 (XAB2)
Spliceosome [BR:
csyr03041
]
Complex B
Other components
Prp19-related factors
103252247 (XAB2)
Complex C
103252247 (XAB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
TPR_14
HAT_PRP39_N
TPR_12
TPR_2
TPR_8
Suf
TPR_19
ARM_TT21
TPR_15
ARM_TT21_C
TPR_1
TPR_MalT
TPR_21
TPR_NPHP3
Motif
Other DBs
NCBI-GeneID:
103252247
NCBI-ProteinID:
XP_008049063
Ensembl:
ENSTSYG00000014147
UniProt:
A0A1U7SY36
LinkDB
All DBs
Position
Unknown
AA seq
855 aa
AA seq
DB search
MVVMARHSRPERPDLVFEEEDLPYEEEIMRNQFSVKCWLRYIEFKQGAPKPRLNQLYERA
LKLLPCSYKLWYRYLKARRAQVKHRCVTDPAYEDVNNCHERAFVFMHKMPRLWLDYCQFL
MDQGRVTHTRRTFDRALRALPITQHSRIWPLYLRFLRSYPLPETAVRGYRRFLKLSPESA
EEYIEYLKSSDRLDEAAQRLATVVNDERFVSKAGKSNYQLWHELCDLISQNPDKVQSLNV
DAIIRGGLTRFTDQLGKLWCSLADYYIRSGHFEKARDVYEEAIRTVMTVRDFTQVFDSYA
QFEESMIAAKMETASELGREEDDDVDLELRLARFEQLISRRPLLLNSVLLRQNPHHVHEW
HKRVALHQGRPREIINTYTEAVQTVDPFKATGKPHTLWVAFAKFYEDNGQLDDARVILEK
ATKVNFKQVDDLASVWCQCGELELRHENYDEALRLLRKATALPARRAEYFDGSEPVQNRV
YKSLKVWSMLADLEESLGTFQSTKAVYDRILDLRIATPQIVINYAMFLEEHKYFEESFKA
YERGISLFKWPNVSDIWSTYLTKFIARYGGRKLERARDLFEQALDGCPPKYAKTLYLLYA
KLEEEWGLARHAMAVYERATRAVEPAQQYDMFNIYIKRAAEIYGVTHTRGIYQKAIEVLS
DEHAREMCLRFADMECKLGEIDRARAIYSFCSQICDPRTTGAFWQTWKDFEVRHGNEDTI
KEMLRIRRSVQATYNTQVNFMASQMLKVSGSATGTVSDLAPGQSGMDDMKLLEQRAEQLA
AEAERDQPLRAQSKILFVRSDASREELAELAQQVNPEEIQLGEDEDEDEMDLEPNEVRLE
QQSVPAAVFGSLKED
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atggtggtgatggcgcgacattcgcggcccgagcggccggaccttgtcttcgaggaagag
gacctcccttacgaggaggaaatcatgcggaaccagttctctgtcaaatgctggcttcgc
tacattgagttcaagcagggtgccccgaagcccaggctcaatcaactgtatgagcgggcg
ctcaagcttctaccctgcagctacaaactctggtaccgctacctgaaggcgcgtcgcgca
caggtaaagcatcgctgtgtgaccgacccggcctatgaagatgtcaacaactgccacgag
agggcctttgtgttcatgcacaagatgccccgtctgtggctagattattgccaattcctg
atggaccaggggcgtgtcacacacacccgccgcaccttcgaccgtgcactccgggcactg
cccatcacgcagcactctcgcatttggcccctgtacctgcgtttcctgcgctcataccca
ctgcccgagacagccgtgcgaggctaccggcgcttcctcaagctgagtcctgagagtgca
gaggagtacatcgaatacctcaagtcaagtgaccgactggatgaggccgcacagcgtctg
gccactgtagtgaatgacgagcgctttgtgtccaaggccggcaagtccaactaccagctg
tggcacgagctatgtgacctcatctctcagaacccggacaaggtgcagtccctcaacgtg
gacgccatcatccgtgggggcctcacccgcttcactgaccagctaggcaagctctggtgc
tccctggccgactactatatccgcagcggccattttgagaaggctcgggacgtgtatgag
gaggccatccggacagtgatgaccgtgcgggacttcacccaggtattcgacagctacgcc
cagtttgaggagagcatgatcgccgctaagatggagaccgcctcggagctggggcgcgag
gaggatgatgacgtcgacctggagctgcgcctggcccgctttgagcagctcatcagccgg
cgacccttgctcctcaacagcgtcttgctgcgccaaaacccgcaccatgtgcatgagtgg
cacaagcgcgtggccctgcaccagggtcgccctcgggagatcatcaacacctacacggag
gcagtgcagacggtggaccccttcaaagcaacgggcaagccccacacactgtgggttgcg
tttgccaagttttatgaggacaacggacagctggacgatgcccgtgtcatcctggagaaa
gccaccaaggtaaacttcaagcaggtggacgacctggccagcgtgtggtgtcagtgtggg
gagctggagctccggcatgaaaattacgatgaggccttgcggctgctgcggaaggccacg
gcactgcctgctcgccgggccgagtactttgatggctccgagcccgtgcagaaccgtgtg
tacaagtcactgaaggtgtggtcaatgcttgccgacctggaagagagcctgggcaccttc
cagtccaccaaggctgtgtatgaccgcatcctggacctgcgcattgccacgccccagatc
gtcatcaactacgccatgttcctggaggagcacaagtacttcgaggagagcttcaaggcg
tacgagcgtggcatctcgctgttcaaatggcccaatgtgtccgacatctggagcacctac
ctgaccaaattcatcgcccgctatgggggccgcaagctggagcgggcacgggacctcttt
gagcaggcgctggacggctgcccacccaaatatgccaagaccctgtacctgctctatgcg
aagctggaggaggagtggggtctggcccggcacgccatggccgtgtacgagcgggccacc
agggccgtggagcccgcccagcagtacgacatgttcaacatctacatcaagcgggcggct
gagatctacggggtcacccacacccgcggcatctatcagaaggccattgaggtgctgtcg
gacgagcacgcccgcgagatgtgcttgcggttcgcggacatggagtgcaagctgggcgag
atcgaccgtgcccgtgccatctacagtttctgctcccagatctgtgacccccggacgaca
ggtgccttctggcagacgtggaaggacttcgaggtccggcacggcaacgaggacaccatc
aaggagatgctgaggatccgccgcagcgtgcaggccacttacaacacgcaggtcaacttc
atggcctcgcagatgctcaaggtgtcaggcagcgccacgggcaccgtgtccgacctggcc
cccgggcagagcggcatggatgacatgaagttgctggagcagcgggcggagcagttggcg
gccgaggccgagcgggaccagcccctgcgcgcacagagcaagatcctgttcgtgaggagc
gacgcctcccgagaggagctggcggagctggcacagcaggtcaaccccgaggagatccag
cttggcgaggatgaggatgaggacgagatggacctggagcccaatgaggtcaggctggag
cagcagagcgtgccagccgccgtgttcgggagcctcaaggaagactga
DBGET
integrated database retrieval system
