Carlito syrichta (Philippine tarsier): 103254966
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Entry
103254966 CDS
T07836
Symbol
CNOT6
Name
(RefSeq) CCR4-NOT transcription complex subunit 6
KO
K12603
CCR4-NOT transcription complex subunit 6 [EC:
3.1.13.4
]
Organism
csyr
Carlito syrichta (Philippine tarsier)
Pathway
csyr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csyr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103254966 (CNOT6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csyr03019
]
103254966 (CNOT6)
Enzymes [BR:
csyr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
103254966 (CNOT6)
Messenger RNA biogenesis [BR:
csyr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
103254966 (CNOT6)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
103254966 (CNOT6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
LRR_14
LRR_4
LRR_8
LRR_1
LRR_LRWD1
LRR_R13L1-DRL21
Motif
Other DBs
NCBI-GeneID:
103254966
NCBI-ProteinID:
XP_021565589
Ensembl:
ENSTSYG00000003982
UniProt:
A0A3Q0DMF4
LinkDB
All DBs
Position
Unknown
AA seq
552 aa
AA seq
DB search
MPKENYEPPDPRRMYTIMSSEEAANGKKSHWVELEISGKVRSLSSSLWSLTHLTALHLSD
NSLSRIPSDIAKLHNLVYLDLSSNKIRSLPAELGNMVSLRELHLNNNLLRVLPFELGKLF
QLQTLGLKGNPLAQDILSLYQEPDGTRRLLSYLLDNLSVSTEQPPPRSWIMLQEPDRTRP
TALFSVMCYNVLCDKYATRQLYGYCPSWALNWDYRKKAIIQEILSCNADIVSLQEVETEQ
YYSFFLVELKERGYNGFFSPKSRARTMSEQERKHVDGCAIFFKTEKFTLVQKHTVEFNQL
AMANSEGSEAMLNRVMTKDNIGVAVLLELRKELIEMSSGKPHLGTEKQLILVANAHMHWD
PEYSDVKLVQTMMFLSEVKNIIDKASRNFKSGVLGEFGTIPLVLCADLNSLPDSGVVEYL
STGGVETNHKDFKELRYNESLTNFSCNGKNGAPNGRITHGFRLKSAYESGLMPYTNYTFD
FKGIIDYIFYSQPQLNTLGILGPLDHHWLVENNISGCPHPLIPSDHFSLFAQLELLLPFL
PHINGIHLSGRR
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaagaaaactacgagccccctgaccctcggaggatgtacacaattatgtcttct
gaggaggcagcaaatggaaagaaatcacattgggtggagcttgaaataagtggaaaagta
agaagcttaagctcatctttgtggtcactaactcacttgacagctttgcatttgagtgac
aattccctgtcccgcattccttcagacattgccaagcttcacaatctggtatatctggac
ctgtcctctaataagatccgtagtttaccagcagaactcggaaacatggtatcactcagg
gagctccatttaaataacaacctgttacgagttctaccttttgagctgggaaaactgttt
cagttgcagactttaggcctgaaaggaaacccgcttgcccaggatatactgagcctttac
caggaaccagatggtacaagaaggctgctgagctatttgctggataacttgtcagtttca
acagaacagccacctccaagatcgtggattatgttgcaagaaccagacagaacaaggccc
accgccttgttttctgtcatgtgctataatgttctttgtgataaatatgcgacccggcag
ttatacggctactgtccatcatgggcactcaattgggactacaggaaaaaggccattatt
caagaaatcttgagctgcaatgctgacattgtgagtcttcaggaggttgaaacggaacag
tattacagtttttttctggtagaactgaaagaacgtggctataatggattctttagtcct
aagtctagagctaggacaatgtcagaacaagaaagaaaacatgttgacggctgtgcaata
ttcttcaaaacggaaaaatttactttggttcagaaacacactgttgaatttaatcagcta
gcaatggcaaattcagaagggtctgaagctatgctgaacagagtcatgacaaaagataac
attggcgttgcagtactgctagagctacgaaaggaattgattgaaatgtcgtctggaaag
ccacatcttggaacagaaaaacaacttatccttgtggccaacgctcatatgcattgggac
cctgagtactctgatgtgaagttggtacaaacgatgatgttcctctcggaagtgaagaac
attattgataaagcctctcgaaacttcaaatccggcgtattgggagagtttggaactatt
ccgctggtgttatgtgcagaccttaattctttgccagactctggtgttgtggagtatctg
agcacgggtggagtagaaacaaatcataaagacttcaaggaactgagatacaatgaaagt
ctcaccaacttcagctgtaacgggaagaatggagcacccaacgggagaatcactcatggc
ttcaggttgaagagtgcctatgagagcggcctgatgccttacacaaactacacgttcgat
ttcaagggtataatcgactacatcttctattcccagcctcagctgaacacgctgggcatc
ctggggcccctggatcaccactggctggtggagaacaacatcagcggctgcccgcacccc
ctcatcccctccgaccacttctcacttttcgcacagctggagctcttgctgcctttcctg
ccccacatcaatggcattcacctttctggcaggaggtag
DBGET
integrated database retrieval system
