KEGG   Carlito syrichta (Philippine tarsier): 103256410
Entry
103256410         CDS       T07836                                 
Symbol
LIG3
Name
(RefSeq) DNA ligase 3
  KO
K10776  DNA ligase 3 [EC:6.5.1.1]
Organism
csyr  Carlito syrichta (Philippine tarsier)
Pathway
csyr03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:csyr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    103256410 (LIG3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:csyr03400]
    103256410 (LIG3)
Enzymes [BR:csyr01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     103256410 (LIG3)
DNA repair and recombination proteins [BR:csyr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     103256410 (LIG3)
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N LIG3_BRCT zf-PARP DNA_ligase_A_C BRCT_2 RNA_ligase mRNA_cap_enzyme Synaptonemal_3
Other DBs
NCBI-GeneID: 103256410
NCBI-ProteinID: XP_008052480
Ensembl: ENSTSYG00000008882
UniProt: A0A1U7T3Y0
LinkDB
Position
Unknown
AA seq 1012 aa
MTLTFKILFPQALRALSRKELCLFQEQHHWPNVRHFIQWSETDLLHGCCLLQRKKPVLSF
QEGYLRSRATCFVFLPGLHVGLCSGPCEMAEQRFCVDYAKRGTAGCKKCKEKIVKGVCRI
GKVVPNPFSESGGDMKEWYHIKCMFEKLERARATTKKIEDLTELEGWEELEDSEKEQITQ
HIADLSSKAASTPKKKTVIQAKLTTTGQVTSPVKDASFVTNTNPRKFSGFSAKPNNSVEA
PSRPTPKTSLSSSKCDPKHKDCLLREFRKLCAMVADNPSYNTKTQIIQDFLRKGSAGDGF
HGDVYLTVKLLLPGVIKSVYNLNDKQIVKLFSRIFNCNPDDMARDLEQGDVSETIRVFFE
QSKSFPPAAKSLLTIQEVDEFLLQLSRLTKEDEQQQALQDIASRCTANDLKCIIRLIKHD
LKMNSGAKHVLDALDPNAYEAFKASRNLQDVVERVLRNEQEVEKEPGRRRALSVQASLMT
PVQPMLAEACKSIEYAMKKCPNGMFSEIKYDGERVQVHKNGDHFNYFSRSLKPVLPHKVA
HFKDYIPQAFPGGHSMILDSEVLLIDNKTGKPLPFGTLGVHKKAAFQDANVCLFVFDCIY
FNDVSLMDRPLCERRKFLHDNMVEIPNRIMFSEMKQVTKASDLADMINRVIQEGLEGLVL
KDVKGTYEPGKRHWLKVKKDYLNEGAMADTADLVVLGAFYGQGSKGGMMSIFLMGCYDPG
SQKWCTVTKCAGGHDDATLARLQKELDMVKISKDPSKIPSWLKINKIYYPDFIVPDPKKA
AVWEITGAEFSKSEAHTADGISIRFPRCTRIRDDKDWKSATNLPQLKELYQLSKEKANIT
VVADDEGGSPTGGSTGENKGTWGSAVARKAPKASPSKLPAKKAEGKPSSPNSKDGNMLTT
KPSPAKVGEKLAVQSSPVRVGKKRKAAAETLCQTKVLLDIFTGVRLFLPPSTPDFSRLRR
YFVAFDGDLVQEFDMASATHVLGSRDQDLEAQQVSSEWIWACIRKRRLVAPC
NT seq 3039 nt   +upstreamnt  +downstreamnt
atgactttgactttcaagatcctctttccacaagccctccgtgcactcagccgtaaagaa
ctgtgcctattccaagaacaacatcactggcctaatgtaagacatttcatccagtggtca
gaaacagatctgcttcatggatgctgcctcctccagagaaaaaagcctgttctatcattc
caggaaggctatctgagatcacgtgccacctgctttgttttcttgccagggttgcatgtg
ggactctgcagtggcccctgtgagatggctgagcaacgattctgtgtggactatgccaag
cgtggtacagctggctgcaaaaaatgcaaggaaaagattgtgaaaggcgtgtgccgaatt
ggcaaagtggtgcccaatcccttctcagagtctgggggtgatatgaaagagtggtaccat
attaaatgcatgtttgagaaactggaacgagcccgggccaccacaaaaaaaattgaggac
ctcacagagctggaaggctgggaagagctggaagatagtgagaaggaacagataacccag
cacattgcagatctatcttctaaggcagcaagtaccccaaagaagaagactgtcatccag
gctaagttaacaaccactggccaggtgacatctccagtgaaagatgcctcgtttgtcacc
aataccaatccccggaaattttctggattttcagccaagcccaacaactctgtggaagcg
ccctcaaggcctacccctaagacaagtctgtcttcaagcaaatgtgaccctaagcacaag
gattgtctgctgcgggagtttcggaagttatgtgccatggtggctgataatcctagctat
aatacgaagacccagatcatccaggactttctgcggaaaggctcagcaggagatggtttc
cacggtgatgtgtacctaacagtgaagctgctgctgccaggtgtcattaagagtgtttac
aacttgaatgataagcagattgtgaagcttttcagtcgcatttttaactgcaacccagat
gatatggcacgggacctagagcagggtgacgtgtcagagacaatcagagtcttctttgag
cagagcaagtctttccccccagctgctaagagcctccttaccatccaggaagtggatgaa
ttcctcctgcaactctccagacttaccaaggaggatgagcagcaacaggccctgcaggac
atcgcctccaggtgtacagccaatgaccttaagtgcatcatcaggttgatcaaacatgat
ttgaagatgaactcaggtgcaaaacacgtgttagacgcccttgaccccaatgcctatgaa
gccttcaaagcctcacgcaacctgcaggatgtggtggagcgtgtccttcgcaatgagcag
gaggtagagaaggagccaggccggagacgggctctgagcgtccaggcctcactgatgacg
cctgtgcaacccatgctggctgaagcctgcaagtccatcgagtacgcaatgaagaagtgt
cctaatggcatgttctctgagatcaagtatgatggtgagcgagtccaggtgcataagaat
ggggaccacttcaactacttcagtcgcagcctcaagcctgtcctgcctcacaaggtggcc
cattttaaggactacatcccccaggcttttcccgggggccatagcatgatcttggactct
gaggtgctcctgattgacaacaagacaggcaaaccactgccctttgggactctgggagta
cacaagaaagctgccttccaagatgctaatgtctgcctgtttgtgtttgattgtatctac
ttcaatgatgtcagcttgatggacaggcctctatgtgagcggcggaagtttcttcatgac
aacatggttgaaattccaaaccggatcatgttctcagaaatgaagcaagtcacaaaagct
tcagacttggctgacatgataaaccgggtgatccaggagggcttggaagggctggtgctg
aaggacgtgaagggcacatatgagcctgggaagcggcactggctgaaagtgaagaaagac
tatttgaacgagggggccatggccgacacagctgacctggtggtccttggggccttctat
gggcaagggagcaaaggcggcatgatgtcgatcttcctcatgggctgctacgaccctggc
agccagaagtggtgcacagtcaccaagtgtgcaggaggccatgatgatgccacactcgcc
cgcctgcagaaggaactggacatggtgaagatcagcaaggatcccagtaagatacccagc
tggctgaagatcaacaagatctactatcctgacttcatcgtcccagacccaaagaaagct
gccgtgtgggagatcacaggggctgaattctccaaatctgaggctcatacagctgatggg
atctctattcgattccctcgctgcacccgaatccgtgatgataaggactggaaatctgcc
actaacctcccccaactcaaggagctataccagctatccaaggaaaaagccaacattact
gtagtggcggatgatgaggggggctcccctacagggggcagcaccggagagaacaagggc
acctggggatctgctgtggcccgcaaggcccccaaagcctcccccagcaagctgccggcc
aagaaagcagaagggaagccaagtagccccaacagcaaagatggcaacatgctgaccaca
aagccgtcccctgcgaaggtgggagagaagctagctgtgcagtcttctccagtgagagtg
gggaagaagcggaaagctgctgctgagaccctgtgccaaacaaaggtgctgctggatatc
ttcactggggtgcggctcttcttgccaccctccacaccagacttcagccgtctaagacgc
tactttgtagcattcgacggggacctggtacaagaatttgacatggcttcagccacacat
gtgctgggtagcagggaccaggaccttgaggcccagcaggtctcctcagagtggatttgg
gcatgtatccggaaaaggagactggtagctccctgctag

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