Carlito syrichta (Philippine tarsier): 103257165
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Entry
103257165 CDS
T07836
Name
(RefSeq) LOW QUALITY PROTEIN: nuclear pore complex protein Nup153-like
KO
K14296
nuclear pore complex protein Nup153
Organism
csyr
Carlito syrichta (Philippine tarsier)
Pathway
csyr03013
Nucleocytoplasmic transport
csyr03250
Viral life cycle - HIV-1
csyr05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
csyr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
103257165
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
103257165
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
103257165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csyr03019
]
103257165
Messenger RNA biogenesis [BR:
csyr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
103257165
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup153
Zn_ribbon_RanBP
Nup_retrotrp_bd
DUF4438
Motif
Other DBs
NCBI-GeneID:
103257165
NCBI-ProteinID:
XP_008053085
UniProt:
A0A1U7T5L5
LinkDB
All DBs
Position
Unknown
AA seq
1472 aa
AA seq
DB search
MASGAGGIRADGGGKIRTRRGHPGPVQPYQQGRPQHRGILGSVTESVKNIVPGWLQRYFS
KDADACSRSADTREVPGGPENREEDHPLCAEEEDSNANGGRIAPEPAARNTEGPSTTGTA
SNYPDVSTRPSLHRSHLNFSMLESSALHTQPSTSSGFPNGSSGFFLLKEIKESTSQHGDD
NISTTSGFCSRASDKDIAVSKNTSLPPLWSPEAERSHFLSQHTATSSEKPAFNLSAFGTL
SPSLGKSSVLKSGQLGDSPFYPGKTRYDGAAAAVRQPELRNTPYQAPVRRQMKAKQLSAQ
SYXSSTARCILQALEKMSSPLADAKRIPSLXSLNSPLDRTGIVITDIQAKRTKVESQYPP
VQSLMTPKSVSIATNRIIYFKPSLTPSGELRKINQRIDQKHSTEYEKNMTXGQNRERESG
FSCTTFSLPATNGLSSGGGGGGGKMRXERTPSVASKPSEEEEMEVPALPKISLPISSSSL
STFNLSSPMITASSPSPMSPSQSLTNKVQMTPPSSTGSPVFTFSPPIVKSTEAYVLPLSS
PSSMGFTFSVPIAKXTEFSDSSHTLEPIISSSAQAVTAMNSTSCKRMIDEDCEGPFRPAK
TLKERSVLDVLKNPGFSSPKADSLAAQPTTTSLVIYTRSATSSFSSSGIEFGGRLKAESS
WQSDTCLLQNKVIDNKCIACQTAKMPPRDPAKQTGIGTPSESGKAALSASGTGFGDKCKP
ALGTCDCDTCLVQNKPEVIKCVACETLKPGIGVKRALTLRVVSESAETITASSSSCTVTT
GTLGFGDKFKRPVGSWECSVCCVSNNAEDNKCVSCMSEKPGNSVPTSRGSTVPVSLSSRS
CLGLDKFKKPEGSWDCEVCLVQNKADSTKCVACESAKPSTKSEFKGFCTSSSSSNPAASS
FKFGIPSSSSGPSQTSASTGSFKFGDQGGFKTGVPSDSGSINPMSEGFTFCKPVGDFKFG
ISSDSKSEEVKKDSKNDNNFKFGLTSCVGNPVSLTPFQCGVSNLGQQEKKEELSKFSPSG
FSLGTGITNPTLVAANAVMTSENKSSFNFGTIETASVSVASFTCKTSETKKEEMPATKGG
FTFGSMEAASLPSASMFVLGRTEEKQQEPVTSPSLVLGKKADSEEPMCVEAFSFGNSEQT
TDESSSQPTFSFGMAETSEMGIEQPVMATFAFGAQTNTTADQGAAKPVFSFLNTSSSSST
PATSAGGGVLGRSTSSSNPPVAAFVFGQASNPVSSSAFGNTAESSTSQSLLFSQDSKPAT
TSSTATAVTPFVLGSGTSSNNSAAYGFNFGATVTSSSTGSSFMLGTGPSAPSASPAFGAN
QMLSFGQNQGASQHNPSGFGSTPSTAALFSAVSQPAPPTFGTVLSNSQLPVFGQQPSLSA
FGAGTANSSPAFHYGSSTTNFNFTNNNPSGVLTFGTNASTPAASAPPSGSGVFPFNGTSA
AFTVRSNRKKKLSSSGTSVSGHKIRTAVRRRK
NT seq
4419 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgggagccggaggaatccgagcggacggtggcggcaagatccggacgcggcgt
ggccacccgggaccggttcagccctaccagcaggggcgaccacagcaccggggtattctt
ggcagcgttaccgaatctgttaagaatattgtgcccgggtggctacaaagatacttcagc
aaggatgcagatgcatgcagccgctcagcggacacacgtgaggttccaggcgggccagaa
aatagagaagaggaccatccgctgtgtgcggaagaagaggactctaatgccaacggtggg
agaatcgctcctgagccagcagcccgtaatacagaaggaccttcaacaaccggtactgct
tcaaattacccagatgtatcaacaaggccttctcttcatcggagccatctgaatttctcc
atgttggaatcctctgcattacacactcagccttccacatcctcgggattcccaaatggc
agttcaggatttttcctcctaaaagaaattaaagagtctacctctcagcatggtgatgac
aacatctcaactaccagtggcttttgttcaagagcttctgataaagatatagctgtttca
aagaacacatcattgccacctctctggtccccagaagctgaacgatctcatttcctctca
cagcacactgccaccagctcagaaaaaccagcattcaacttgtctgcctttggaactctt
tccccttcacttgggaagtcttcagttcttaaaagtggtcagcttggagattctccgttt
tatcctggaaaaacaaggtatgatggggcagcagctgctgtaagacagcctgaactccga
aatacgccttatcaggcaccagtcagaagacaaatgaaagctaagcaactcagtgcacaa
tcttacnncagttcaacagctcggtgcatattgcaggctttagagaagatgtcaagcccc
ttagcagatgccaaaagaattccatctttgntttctttgaattctcctctcgataggact
ggaatagttattacagatattcaggccaaaagaacaaaggtggaatctcagtatccccct
gttcagagtctcatgaccccaaagtcagtttccatagcaacaaatcgaattatttatttt
aagccatctctgaccccatctggtgaattaaggaagattaatcaaagaatagatcaaaag
cacagtactgaatatgaaaaaaatatgacancaggacaaaacagagaacgagaaagtggc
ttttcatgcacaactttcagtttgcctgcaaccaatggtttatcttctggaggaggtggt
ggaggtggcaagatgagancagagagaacaccctctgttgcttctaaaccttcagaggaa
gaggaaatggaagtaccagcattaccaaaaatctctctaccaatctctagttcttcactg
tctaccttcaatcttagttcccctatgatcacagcttcctctccatcacctatgagccca
tctcagtcattaacaaacaaggtacaaatgacccctccaagcagcactggcagtcctgtg
tttacattttcacctccaattgtaaaatctactgaggcatacgtactacctctgtcatct
ccatcatctatgggatttacatttagtgtgccaattgcaaaannaacagaattttctgac
tctagtcatactttagaaccaattataagtagttcagctcaagctgtcactgcaatgaat
agtacaagttgcaagaggatgatagatgaagattgtgagggcccttttagacctgcaaaa
accctgaaagaaagaagtgttctggatgttctgaaaaaccctggtttttcatcaccaaag
gcagactctcttgctgcacagcctaccacgacaagcctggtaatttatacaagatctgca
acaagtagcttttcttctagtggaatcgagtttgggggaagattaaaagctgaatcctca
tggcaaagtgatacatgtctactgcagaacaaagttatagacaataagtgcatagcctgc
caaacagcaaaaatgccaccaagagatcctgctaaacagactggaattgggacaccaagt
gaaagtggcaaagcagctctttctgcatcagggacaggctttggagacaaatgtaaacca
gccctaggaacttgtgattgtgatacctgcttagtgcaaaataaacctgaagtgataaaa
tgtgtagcctgtgaaacactgaaacctggaattggtgtgaagcgagccctaactttgaga
gtagtttccgaaagtgctgagactataactgcttcatcttctagctgcactgtgaccact
ggtaccttaggatttggagataaattcaaaaggcctgtgggatcatgggaatgttcagta
tgctgtgtttctaataacgcagaagacaataaatgtgtgtcctgtatgtcagagaaacca
ggaaattcagtacctacttcaagaggcagcactgtacctgtctctctatcatccagaagc
tgtctaggattagacaagttcaagaaacctgagggaagctgggactgtgaagtgtgccta
gtgcagaataaagcagattctaccaaatgtgtagcatgtgaaagtgcaaagccaagcaca
aaatctgagtttaaaggcttttgcacatcttcctcatcttcgaacccagcagcctcgtcc
ttcaaatttggtatcccatcatcctcttctgggccttctcagacttcagcaagcactgga
agttttaaatttggagatcagggaggatttaaaacaggtgtgccatctgattctgggtct
ataaaccccatgagcgaaggctttacattttgtaaaccagtaggagattttaaatttgga
atttcatcagactctaaatctgaagaagttaaaaaagacagtaagaatgacaataatttt
aagtttggacttacttcttgtgtaggcaacccagtttctttaactccatttcaatgtggg
gtgtctaatcttgggcaacaagaaaagaaagaggaactgtctaaattttccccttcaggc
tttagccttggtacaggtattaccaaccctacccttgttgctgctaatgccgtcatgacc
tctgagaacaagagcagtttcaactttggaaccatagaaaccgcgagtgtttcagtggct
tctttcacatgtaagacatcagaaacaaaaaaagaagaaatgcctgccaccaaaggaggg
ttcacttttggcagtatggaagctgcttctctgccatctgcttcaatgtttgttttggga
aggacagaagagaaacagcaagagcccgtcacttctccttccctagttttggggaagaaa
gctgacagtgaagaaccaatgtgtgtagaagcgttttcttttgggaattcagagcaaacc
acagatgagagttcctcacagcccacatttagttttggtatggcagaaacatctgagatg
ggaattgaacagccagtaatggctacttttgcttttggagctcaaaccaatactacagct
gatcaaggtgcagcaaagccagtttttagttttttgaacacttcttctagttcaagtaca
ccagcgacttctgctggtggtggcgtacttggtagatccacctcttcctccaatccacct
gtggctgcctttgtgtttggacaggccagcaatcctgtgagcagctctgcctttggtaac
actgctgaatccagtacatctcagtctttgctattttctcaagatagcaaaccagcaacc
acatctagcacagctacagcggtcacgccatttgtccttggttcaggaactagcagcaat
aattcagcagcctatggtttcaactttggagctacagtcacatctagctctacaggatcc
tcctttatgcttggaactggaccttcagcaccatctgccagtccagcgtttggtgctaat
cagatgctatcatttggacaaaatcaaggtgccagccagcataatccctcaggctttgga
tctacaccgtccacagcagcattattttctgctgtttctcagccggcaccacctactttt
gggacagtattaagcaatagtcagcttcctgtgtttggtcagcaacctagtctgtctgca
tttggcgctggaacagctaattccagtccagctttccactatggcagcagtactacaaat
ttcaacttcacaaacaataatccatcaggagtgctcacatttggtacaaatgctagcaca
cctgcagcctcagccccaccttctggctcaggtgtctttccatttaatgggacttcagca
gcattcacagtaaggtcaaataggaaaaaaaagttatcttcctctggaacttcagtttct
ggtcacaagataaggactgccgttagacgccggaaataa
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