KEGG   Carlito syrichta (Philippine tarsier): 103257241
Entry
103257241         CDS       T07836                                 
Symbol
PBRM1
Name
(RefSeq) protein polybromo-1 isoform X1
  KO
K11757  protein polybromo-1
Organism
csyr  Carlito syrichta (Philippine tarsier)
Pathway
csyr03082  ATP-dependent chromatin remodeling
csyr05225  Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:csyr00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    103257241 (PBRM1)
 09160 Human Diseases
  09162 Cancer: specific types
   05225 Hepatocellular carcinoma
    103257241 (PBRM1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:csyr03021]
    103257241 (PBRM1)
   03036 Chromosome and associated proteins [BR:csyr03036]
    103257241 (PBRM1)
Transcription machinery [BR:csyr03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     103257241 (PBRM1)
Chromosome and associated proteins [BR:csyr03036]
 Eukaryotic type
  Chromatin remodeling factors
   PBAF complex
    103257241 (PBRM1)
SSDB
Motif
Pfam: Bromodomain BAH HMG_box HMG_box_2 HMG_WDHD1
Other DBs
NCBI-GeneID: 103257241
NCBI-ProteinID: XP_021566547
Ensembl: ENSTSYG00000006795
UniProt: A0A3Q0DVF9
LinkDB
Position
Unknown
AA seq 1704 aa
MGSKRRRATSPSSSVSGEFDDGHHSVSTPGPSRKRRRLSNLPTVDPIAVCHELYNTIRDY
KDEQGRLLCELFIRAPKRRNQPDYYEVVSQPIDLMKIQQKLKMEEYDDVNLLTADFQLLF
NNAKAYYKPDSPEYKAACKLWDLYLRTRNEFVQKGEADDEDDDEDGQDNQGTVTEGSSPG
YLKEILEQLLEAIVVATNPSGHLISELFQKLPSKVQYPDYYAIIKEPIDLKTIAQRIQNG
SYKSIHAMAKDIDLLAKNAKTYNEPGSQVFKDANSIKKIFYMKKAEIEHHEMAKSSLRMR
TPSSLATARLTSPPHSKGNLAEERNSTSKYYRNKRTVQGGRLSAITMALQYGSESEEDAA
LAAARYEEGESEAESITSFMDVSNPFYQLYDTVRSCRNNQGQLIAEPFFHLPSKKKYPDY
YQQIKMPISLQQIRTKLKNQEYETLDHLECDLNLMFENAKRYNVPNSAIYKRVLKLQQVM
QAKKKELARRDDIEDGDSMISSATSDTGSAKRKRNTHDSEMLGLRRLSSKKNIRKQRMKI
LFNVVLEAREPGSGRRLCDLFMVKPSKKDYPDYYKIILEPMDLKIIEHNIRNDKYAGEEG
MIEDMKLMFRNARHYNEEGSQVYNDAHILEKLLKDKRKELGPLPDDDDMASPKLKLSRKS
GISPKKSKYMTPMQQKLNEVYEAVKNYTDKRGRRLSAIFLRLPSRSELPDYYLTIKKPMD
MEKIRSHMMANKYQDIDSMVEDFVMMFNNACTYNEPESLIYKDALVLHKVLLETRRDLEG
DEDSHVPNVTLLIQELIHNLFVSVMSHQDDEGRCYSDSLAEIPAVDPNFPNKPPLTFDII
RKNVENNRYRRLDLFQEHMFEVLERARRMNRTDSEIYEDAVELQQFFIKIRDELCKNGEI
LLSPALSYTTKHLHNDVEKERKEKLPKEIEEDKLKREEEKREAEKSEDSSGAAGLSGLHR
TYSQDCSFKNSMYHVGDYVYVEPAEANLQPHIVCIERLWEDSAGEKWLYGCWFYRPNETF
HLATRKFLEKEVFKSDYYNKVPVSKILGKCVVMFVKEYFKLCPENFRDEDVFVCESRYSA
KTKSFKKIKLWTMPISSVRFVPRDVPLPVVRVASVFANADKGDDEKNTDNSEDSRAEDNF
NLEKEKEDVPVEMSNGEPGCHYFEQLRYNDMWLKVGDCVFIKSHGLVRPRVGRIEKVWVR
DGAAYFYGPIFIHPEETEHEPTKMFYKKEVFLSNLEETCPMTCILGKCAVLSFKDFLSCR
PTEIPENDILLCESRYNESDKQMKKFKGLKRFSLSAKVVDDEIYYFRKPIIPQKEPSPLL
EKKIQLLEAKFAELEGGDDDIEEMGEEDSEVIEPPSLPQLQTPLASELDLMPYTPPQSTP
KSAKGSAKKEGSKRKINMSGYILFSSEMRAVIKAQHPDYSFGELSRLVGTEWRNLETAKK
AEYEERAAKVAEQQERERAAQQQQPSASPRAGTPVGALMGVVPPPTPMGMLNQQLTPVAG
MMGGYPPGLPPLQGPVDGLVSMGSMQPLHPGGPPPHHLPPGVPGLPGIPPPGVMNQGVAP
MVGTPAAGGSPYGQQVGVLGPPGQQAPPPYPGPHPAGPPVIQQPTTPMFVAPPPKTQRLL
HSEAYLKYIEGLSAESNSISKWDQTLAARRRDVHLSKEQESRLPSHWLKSKGAHTTMADA
LWRLRDLMLRDTLNIRQAYNLENI
NT seq 5115 nt   +upstreamnt  +downstreamnt
atgggttccaaaagaagaagagctacctccccttccagcagtgtcagtggggaatttgat
gatgggcaccattctgtgtccacgccaggcccaagcaggaaaaggaggagactttccaat
cttccaactgtagatcctattgctgtgtgtcatgaactgtataacaccatccgagactat
aaggatgagcaaggcagactcctctgtgaactcttcattagggcaccaaaacgaagaaat
caaccagactattatgaagtggtttctcagcccattgacttgatgaaaatccaacagaaa
ctaaaaatggaagagtatgatgatgttaatctgctgactgctgacttccaactgcttttt
aacaacgcaaaggcctattataagccagattctcctgaatataaagctgcttgcaaactc
tgggatttgtaccttcgaacaagaaatgagtttgttcagaaaggagaagcagatgacgaa
gatgatgacgaagatggtcaggacaatcaaggcacagtgactgaaggatcttctccaggt
tacttgaaggagatactggagcagcttcttgaagccatagttgtagccacaaatccatca
ggacatctcattagtgaactttttcagaaactgccttctaaagtgcaatatccagactat
tatgcaataattaaggagcctatagatctcaagaccattgcccagaggatacagaatgga
agctacaaaagtattcatgcaatggccaaagatatagatctcctagcaaaaaatgccaaa
acttataatgagcctggttctcaagtattcaaggatgcaaattcaattaaaaaaatattt
tatatgaaaaaggcagaaattgaacatcatgaaatggcaaagtcaagtcttagaatgagg
actccatcaagtttggctacagcgaggctgacgagtcctccacacagtaaaggcaacctt
gctgaagagagaaattctactagcaagtattaccgtaataaaagaacagtccaagggggt
cgtttatcggcaattaccatggcacttcagtatggctcagaaagtgaagaggatgctgct
ttagcagctgcacgttatgaagaaggagaatcggaagcagagagcatcacttcctttatg
gatgtttcaaatcctttttatcaactttatgacacagttaggagttgtcggaataaccaa
ggacagctaatagctgaaccttttttccacttgccttcaaagaagaaataccctgattat
tatcagcaaattaagatgcccatatcactacaacagatccgaacaaagctaaagaaccaa
gaatatgaaactttagatcatttggagtgtgatctgaacttaatgtttgaaaatgccaaa
cgctataatgttcccaattcagccatctacaagcgagttctaaaattgcagcaagttatg
caggcaaagaagaaagagcttgccaggagagacgatattgaggacggagacagcatgatc
tcttcagccacctctgatactggtagtgccaaaagaaaaaggaacactcatgacagtgag
atgttgggtctcaggaggctatccagtaaaaagaacataagaaagcagcgaatgaaaatc
ttattcaatgttgttcttgaagctcgagagccaggttcaggcagaagactttgtgatcta
tttatggttaaaccatccaaaaaggactatcctgattattataaaatcattttggagcca
atggacttgaaaataattgagcataacatccgcaatgacaaatatgcaggtgaagaggga
atgatagaagacatgaagttgatgttccgtaatgcaaggcactacaatgaggagggctcc
caggtgtacaatgatgcgcatatcctcgagaagctactcaaggataaaaggaaagaactg
ggcccactgcctgatgatgatgatatggcttctcccaaactcaagctaagtaggaagagt
ggcatttctcctaaaaaatcaaaatacatgactccaatgcaacagaaactaaatgaagtc
tatgaagctgtaaagaactatactgataagaggggtcgccgcctcagtgccatttttctg
aggcttccctccagatctgagttgcctgactactatctgaccattaaaaagcccatggac
atggaaaagattcgaagtcacatgatggcaaacaaataccaagatattgactctatggtt
gaggactttgtcatgatgtttaataatgcctgtacatacaatgagcctgagtcattgatc
tacaaagatgctcttgtcctacacaaagtcctgcttgaaactcggagagacctggagggt
gatgaggactcccatgtcccaaatgtgaccttgctgattcaagagcttatccacaatctt
tttgtgtcagtcatgagtcatcaagatgatgagggaagatgctacagtgattccttagca
gaaattcctgctgtggatcctaattttcctaataaaccaccccttacttttgacataatt
aggaagaatgttgaaaataatcgctaccggcggcttgatttatttcaggagcatatgttt
gaagtattggaaagggcaagaaggatgaatcggacagattctgaaatatatgaggatgcg
gtagaacttcagcagttttttattaaaattcgtgatgaactctgcaaaaatggagagatc
cttctttcaccagcactcagctataccacaaaacatttgcacaatgatgtggagaaagag
agaaaggaaaaattgccaaaagaaatagaggaagataaactaaaacgagaagaagaaaaa
agagaagctgaaaagagtgaagattcctctggtgctgcaggcctctcaggcttacaccgc
acatatagccaggactgcagctttaagaacagcatgtaccatgttggagattatgtttat
gtggaacctgcagaagccaacctacaaccacatatagtctgtattgagagactgtgggaa
gattcagctggtgaaaaatggttgtatggctgttggttttatcgaccaaatgaaacattc
cacctggccacacgaaaatttctagaaaaagaagtttttaagagtgactattacaacaaa
gttcctgttagtaaaattctgggcaagtgtgtggtcatgtttgtcaaggaatactttaaa
ttatgcccagaaaactttcgagatgaggatgtttttgtctgtgaatcacgttattctgcc
aaaaccaagtcttttaagaaaattaaactgtggaccatgcccatcagctcagtgagattt
gtccctcgggatgtgcccctgcctgtggttcgagtggcctctgtatttgcaaatgcagat
aaaggtgatgatgagaagaacacagacaactcagaggacagtagagccgaagataatttt
aacttggaaaaggaaaaagaagatgtccctgtggaaatgtccaacggtgaaccaggttgc
cactactttgagcagcttcgttacaatgacatgtggctgaaagttggtgactgtgtcttc
atcaagtcccatggcctcgtgcgtcctcgtgtgggcagaattgaaaaagtatgggttcga
gatggagctgcatatttttatggccccatcttcattcacccagaagagacggagcatgaa
cccacaaaaatgttttataaaaaagaagtatttctgagcaatctggaagaaacctgtccc
atgacatgtattctgggaaagtgtgctgtgttgtcattcaaggacttcctctcctgcagg
ccaactgaaataccagaaaatgacattctgctttgtgagagccgctacaatgagagtgac
aagcaaatgaagaaatttaagggactgaagaggttttcactctctgctaaagtagtagat
gatgaaatttattatttcagaaaaccaatcattcctcagaaggagccctcacctttgttg
gaaaagaaaattcagttgctagaagctaaatttgccgagttggaaggtggagatgatgat
attgaagagatgggtgaagaagatagtgaggtcattgagcctccctctctacctcagctt
cagactcccctggccagtgagctggacctcatgccctatacaccaccacagtctacccca
aaatctgccaaaggcagtgcaaagaaggaaggctccaaacggaaaatcaacatgagtggc
tacatcctgtttagcagtgagatgagagctgtgattaaggcccagcacccagactactct
tttggggagctcagccggctggtggggacagaatggagaaaccttgagacagccaagaaa
gcagaatatgaagagcgggcagctaaagttgctgagcagcaggagagagagcgagcagca
cagcaacagcagccgagtgcttctccccgagcaggcacccctgtgggggctctcatgggg
gtggtgccaccaccaacaccaatggggatgctcaatcagcagttgacacctgttgcaggc
atgatgggtggctatccgccaggtcttccacctttgcagggcccagttgatggccttgtt
agcatgggcagcatgcagccacttcaccctggggggcctccaccccaccatcttccgcca
ggtgtgcctggcctcccaggcatcccaccaccgggtgtgatgaaccaaggagtggcccct
atggtagggactccagcagcaggtggaagtccctatggacaacaggtgggagttttgggg
cctccagggcagcaggcaccacctccataccccggtccacatccagccggaccccctgtc
atacagcagccaacaacacccatgtttgtggctcctccaccgaagacccaacggcttctc
cattcagaggcctacctgaaatacattgaaggactcagtgctgagtccaacagcattagc
aagtgggatcagaccctggcagctcgaagacgcgatgttcatttgtcaaaggaacaggaa
agccgcctgccttctcattggctgaaaagtaaaggggcccataccaccatggcagacgcc
ctctggcgccttcgagatttgatgctccgagacaccctcaacattcgccaagcatacaat
ctagaaaacatttaa

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