Carlito syrichta (Philippine tarsier): 103257241
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Entry
103257241 CDS
T07836
Symbol
PBRM1
Name
(RefSeq) protein polybromo-1 isoform X1
KO
K11757
protein polybromo-1
Organism
csyr
Carlito syrichta (Philippine tarsier)
Pathway
csyr03082
ATP-dependent chromatin remodeling
csyr05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
csyr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
103257241 (PBRM1)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
103257241 (PBRM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csyr03021
]
103257241 (PBRM1)
03036 Chromosome and associated proteins [BR:
csyr03036
]
103257241 (PBRM1)
Transcription machinery [BR:
csyr03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
103257241 (PBRM1)
Chromosome and associated proteins [BR:
csyr03036
]
Eukaryotic type
Chromatin remodeling factors
PBAF complex
103257241 (PBRM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Bromodomain
BAH
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
103257241
NCBI-ProteinID:
XP_021566547
Ensembl:
ENSTSYG00000006795
UniProt:
A0A3Q0DVF9
LinkDB
All DBs
Position
Unknown
AA seq
1704 aa
AA seq
DB search
MGSKRRRATSPSSSVSGEFDDGHHSVSTPGPSRKRRRLSNLPTVDPIAVCHELYNTIRDY
KDEQGRLLCELFIRAPKRRNQPDYYEVVSQPIDLMKIQQKLKMEEYDDVNLLTADFQLLF
NNAKAYYKPDSPEYKAACKLWDLYLRTRNEFVQKGEADDEDDDEDGQDNQGTVTEGSSPG
YLKEILEQLLEAIVVATNPSGHLISELFQKLPSKVQYPDYYAIIKEPIDLKTIAQRIQNG
SYKSIHAMAKDIDLLAKNAKTYNEPGSQVFKDANSIKKIFYMKKAEIEHHEMAKSSLRMR
TPSSLATARLTSPPHSKGNLAEERNSTSKYYRNKRTVQGGRLSAITMALQYGSESEEDAA
LAAARYEEGESEAESITSFMDVSNPFYQLYDTVRSCRNNQGQLIAEPFFHLPSKKKYPDY
YQQIKMPISLQQIRTKLKNQEYETLDHLECDLNLMFENAKRYNVPNSAIYKRVLKLQQVM
QAKKKELARRDDIEDGDSMISSATSDTGSAKRKRNTHDSEMLGLRRLSSKKNIRKQRMKI
LFNVVLEAREPGSGRRLCDLFMVKPSKKDYPDYYKIILEPMDLKIIEHNIRNDKYAGEEG
MIEDMKLMFRNARHYNEEGSQVYNDAHILEKLLKDKRKELGPLPDDDDMASPKLKLSRKS
GISPKKSKYMTPMQQKLNEVYEAVKNYTDKRGRRLSAIFLRLPSRSELPDYYLTIKKPMD
MEKIRSHMMANKYQDIDSMVEDFVMMFNNACTYNEPESLIYKDALVLHKVLLETRRDLEG
DEDSHVPNVTLLIQELIHNLFVSVMSHQDDEGRCYSDSLAEIPAVDPNFPNKPPLTFDII
RKNVENNRYRRLDLFQEHMFEVLERARRMNRTDSEIYEDAVELQQFFIKIRDELCKNGEI
LLSPALSYTTKHLHNDVEKERKEKLPKEIEEDKLKREEEKREAEKSEDSSGAAGLSGLHR
TYSQDCSFKNSMYHVGDYVYVEPAEANLQPHIVCIERLWEDSAGEKWLYGCWFYRPNETF
HLATRKFLEKEVFKSDYYNKVPVSKILGKCVVMFVKEYFKLCPENFRDEDVFVCESRYSA
KTKSFKKIKLWTMPISSVRFVPRDVPLPVVRVASVFANADKGDDEKNTDNSEDSRAEDNF
NLEKEKEDVPVEMSNGEPGCHYFEQLRYNDMWLKVGDCVFIKSHGLVRPRVGRIEKVWVR
DGAAYFYGPIFIHPEETEHEPTKMFYKKEVFLSNLEETCPMTCILGKCAVLSFKDFLSCR
PTEIPENDILLCESRYNESDKQMKKFKGLKRFSLSAKVVDDEIYYFRKPIIPQKEPSPLL
EKKIQLLEAKFAELEGGDDDIEEMGEEDSEVIEPPSLPQLQTPLASELDLMPYTPPQSTP
KSAKGSAKKEGSKRKINMSGYILFSSEMRAVIKAQHPDYSFGELSRLVGTEWRNLETAKK
AEYEERAAKVAEQQERERAAQQQQPSASPRAGTPVGALMGVVPPPTPMGMLNQQLTPVAG
MMGGYPPGLPPLQGPVDGLVSMGSMQPLHPGGPPPHHLPPGVPGLPGIPPPGVMNQGVAP
MVGTPAAGGSPYGQQVGVLGPPGQQAPPPYPGPHPAGPPVIQQPTTPMFVAPPPKTQRLL
HSEAYLKYIEGLSAESNSISKWDQTLAARRRDVHLSKEQESRLPSHWLKSKGAHTTMADA
LWRLRDLMLRDTLNIRQAYNLENI
NT seq
5115 nt
NT seq
+upstream
nt +downstream
nt
atgggttccaaaagaagaagagctacctccccttccagcagtgtcagtggggaatttgat
gatgggcaccattctgtgtccacgccaggcccaagcaggaaaaggaggagactttccaat
cttccaactgtagatcctattgctgtgtgtcatgaactgtataacaccatccgagactat
aaggatgagcaaggcagactcctctgtgaactcttcattagggcaccaaaacgaagaaat
caaccagactattatgaagtggtttctcagcccattgacttgatgaaaatccaacagaaa
ctaaaaatggaagagtatgatgatgttaatctgctgactgctgacttccaactgcttttt
aacaacgcaaaggcctattataagccagattctcctgaatataaagctgcttgcaaactc
tgggatttgtaccttcgaacaagaaatgagtttgttcagaaaggagaagcagatgacgaa
gatgatgacgaagatggtcaggacaatcaaggcacagtgactgaaggatcttctccaggt
tacttgaaggagatactggagcagcttcttgaagccatagttgtagccacaaatccatca
ggacatctcattagtgaactttttcagaaactgccttctaaagtgcaatatccagactat
tatgcaataattaaggagcctatagatctcaagaccattgcccagaggatacagaatgga
agctacaaaagtattcatgcaatggccaaagatatagatctcctagcaaaaaatgccaaa
acttataatgagcctggttctcaagtattcaaggatgcaaattcaattaaaaaaatattt
tatatgaaaaaggcagaaattgaacatcatgaaatggcaaagtcaagtcttagaatgagg
actccatcaagtttggctacagcgaggctgacgagtcctccacacagtaaaggcaacctt
gctgaagagagaaattctactagcaagtattaccgtaataaaagaacagtccaagggggt
cgtttatcggcaattaccatggcacttcagtatggctcagaaagtgaagaggatgctgct
ttagcagctgcacgttatgaagaaggagaatcggaagcagagagcatcacttcctttatg
gatgtttcaaatcctttttatcaactttatgacacagttaggagttgtcggaataaccaa
ggacagctaatagctgaaccttttttccacttgccttcaaagaagaaataccctgattat
tatcagcaaattaagatgcccatatcactacaacagatccgaacaaagctaaagaaccaa
gaatatgaaactttagatcatttggagtgtgatctgaacttaatgtttgaaaatgccaaa
cgctataatgttcccaattcagccatctacaagcgagttctaaaattgcagcaagttatg
caggcaaagaagaaagagcttgccaggagagacgatattgaggacggagacagcatgatc
tcttcagccacctctgatactggtagtgccaaaagaaaaaggaacactcatgacagtgag
atgttgggtctcaggaggctatccagtaaaaagaacataagaaagcagcgaatgaaaatc
ttattcaatgttgttcttgaagctcgagagccaggttcaggcagaagactttgtgatcta
tttatggttaaaccatccaaaaaggactatcctgattattataaaatcattttggagcca
atggacttgaaaataattgagcataacatccgcaatgacaaatatgcaggtgaagaggga
atgatagaagacatgaagttgatgttccgtaatgcaaggcactacaatgaggagggctcc
caggtgtacaatgatgcgcatatcctcgagaagctactcaaggataaaaggaaagaactg
ggcccactgcctgatgatgatgatatggcttctcccaaactcaagctaagtaggaagagt
ggcatttctcctaaaaaatcaaaatacatgactccaatgcaacagaaactaaatgaagtc
tatgaagctgtaaagaactatactgataagaggggtcgccgcctcagtgccatttttctg
aggcttccctccagatctgagttgcctgactactatctgaccattaaaaagcccatggac
atggaaaagattcgaagtcacatgatggcaaacaaataccaagatattgactctatggtt
gaggactttgtcatgatgtttaataatgcctgtacatacaatgagcctgagtcattgatc
tacaaagatgctcttgtcctacacaaagtcctgcttgaaactcggagagacctggagggt
gatgaggactcccatgtcccaaatgtgaccttgctgattcaagagcttatccacaatctt
tttgtgtcagtcatgagtcatcaagatgatgagggaagatgctacagtgattccttagca
gaaattcctgctgtggatcctaattttcctaataaaccaccccttacttttgacataatt
aggaagaatgttgaaaataatcgctaccggcggcttgatttatttcaggagcatatgttt
gaagtattggaaagggcaagaaggatgaatcggacagattctgaaatatatgaggatgcg
gtagaacttcagcagttttttattaaaattcgtgatgaactctgcaaaaatggagagatc
cttctttcaccagcactcagctataccacaaaacatttgcacaatgatgtggagaaagag
agaaaggaaaaattgccaaaagaaatagaggaagataaactaaaacgagaagaagaaaaa
agagaagctgaaaagagtgaagattcctctggtgctgcaggcctctcaggcttacaccgc
acatatagccaggactgcagctttaagaacagcatgtaccatgttggagattatgtttat
gtggaacctgcagaagccaacctacaaccacatatagtctgtattgagagactgtgggaa
gattcagctggtgaaaaatggttgtatggctgttggttttatcgaccaaatgaaacattc
cacctggccacacgaaaatttctagaaaaagaagtttttaagagtgactattacaacaaa
gttcctgttagtaaaattctgggcaagtgtgtggtcatgtttgtcaaggaatactttaaa
ttatgcccagaaaactttcgagatgaggatgtttttgtctgtgaatcacgttattctgcc
aaaaccaagtcttttaagaaaattaaactgtggaccatgcccatcagctcagtgagattt
gtccctcgggatgtgcccctgcctgtggttcgagtggcctctgtatttgcaaatgcagat
aaaggtgatgatgagaagaacacagacaactcagaggacagtagagccgaagataatttt
aacttggaaaaggaaaaagaagatgtccctgtggaaatgtccaacggtgaaccaggttgc
cactactttgagcagcttcgttacaatgacatgtggctgaaagttggtgactgtgtcttc
atcaagtcccatggcctcgtgcgtcctcgtgtgggcagaattgaaaaagtatgggttcga
gatggagctgcatatttttatggccccatcttcattcacccagaagagacggagcatgaa
cccacaaaaatgttttataaaaaagaagtatttctgagcaatctggaagaaacctgtccc
atgacatgtattctgggaaagtgtgctgtgttgtcattcaaggacttcctctcctgcagg
ccaactgaaataccagaaaatgacattctgctttgtgagagccgctacaatgagagtgac
aagcaaatgaagaaatttaagggactgaagaggttttcactctctgctaaagtagtagat
gatgaaatttattatttcagaaaaccaatcattcctcagaaggagccctcacctttgttg
gaaaagaaaattcagttgctagaagctaaatttgccgagttggaaggtggagatgatgat
attgaagagatgggtgaagaagatagtgaggtcattgagcctccctctctacctcagctt
cagactcccctggccagtgagctggacctcatgccctatacaccaccacagtctacccca
aaatctgccaaaggcagtgcaaagaaggaaggctccaaacggaaaatcaacatgagtggc
tacatcctgtttagcagtgagatgagagctgtgattaaggcccagcacccagactactct
tttggggagctcagccggctggtggggacagaatggagaaaccttgagacagccaagaaa
gcagaatatgaagagcgggcagctaaagttgctgagcagcaggagagagagcgagcagca
cagcaacagcagccgagtgcttctccccgagcaggcacccctgtgggggctctcatgggg
gtggtgccaccaccaacaccaatggggatgctcaatcagcagttgacacctgttgcaggc
atgatgggtggctatccgccaggtcttccacctttgcagggcccagttgatggccttgtt
agcatgggcagcatgcagccacttcaccctggggggcctccaccccaccatcttccgcca
ggtgtgcctggcctcccaggcatcccaccaccgggtgtgatgaaccaaggagtggcccct
atggtagggactccagcagcaggtggaagtccctatggacaacaggtgggagttttgggg
cctccagggcagcaggcaccacctccataccccggtccacatccagccggaccccctgtc
atacagcagccaacaacacccatgtttgtggctcctccaccgaagacccaacggcttctc
cattcagaggcctacctgaaatacattgaaggactcagtgctgagtccaacagcattagc
aagtgggatcagaccctggcagctcgaagacgcgatgttcatttgtcaaaggaacaggaa
agccgcctgccttctcattggctgaaaagtaaaggggcccataccaccatggcagacgcc
ctctggcgccttcgagatttgatgctccgagacaccctcaacattcgccaagcatacaat
ctagaaaacatttaa
DBGET
integrated database retrieval system