Carlito syrichta (Philippine tarsier): 103258066
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Entry
103258066 CDS
T07836
Symbol
HTT
Name
(RefSeq) huntingtin
KO
K04533
huntingtin
Organism
csyr
Carlito syrichta (Philippine tarsier)
Pathway
csyr05016
Huntington disease
csyr05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
csyr00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
103258066 (HTT)
05022 Pathways of neurodegeneration - multiple diseases
103258066 (HTT)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csyr03019
]
103258066 (HTT)
04131 Membrane trafficking [BR:
csyr04131
]
103258066 (HTT)
03029 Mitochondrial biogenesis [BR:
csyr03029
]
103258066 (HTT)
Messenger RNA biogenesis [BR:
csyr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
103258066 (HTT)
Membrane trafficking [BR:
csyr04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
103258066 (HTT)
Mitochondrial biogenesis [BR:
csyr03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
103258066 (HTT)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Htt_C-HEAT
Htt_N-HEAT
Htt_bridge
Htt_N-HEAT_1
HEAT
HEAT_GCN1
RIC1
HEAT_EF3_N
Rad26-like_helical_rpts
DNA_pack_N
Motif
Other DBs
NCBI-GeneID:
103258066
NCBI-ProteinID:
XP_021566910
Ensembl:
ENSTSYG00000014271
UniProt:
A0A3Q0DY02
LinkDB
All DBs
Position
Unknown
AA seq
3075 aa
AA seq
DB search
MATLEKLMKAFESLKSFQQQQQKKELSATKKDRVNHCLTICENIVAQSLRNSPEFQKLLG
IAMELFLLCSDDAESDVRMVADECLNKVIKALMDSNLPRLQLELYKEIKKNGAPRSLRAA
LWRFAELAHLVRPQKCRPYLVNLLPCLTRTSKRTEESVQETLAAAVPKIMASFGNFANDN
EIKVLLKAFIANLKSNSPTIRRTAAGSAVSICQHSRRTQYFYSWLLNVLLGLLVPVEDEH
STLLILGVLLTLRYLVPLLQQQVKDTSLKGSFGVTRKEMEVSPSTEQLVQVYELTLHYTQ
HQDHNVVTGALELLQQLFRTPPPELLQALTMAGGIGHLTVAKNESGGRSRSGSIVELIAG
GGSSCSPVLSRKQKGKVLLGEEEALEDDSESRSDVSSSAFAASVKSEIGGELAASSGVST
PGSVGHDIITEQPRSQHTLQADSVDLAGCDLTSSATDGDEEDILSHSSSQVSAVPSDPAM
DLNGGTQASSPISDSSQTTTEGPDSAVTPSDSSEIVLDGADSQYSGMQIGQPQDEDEEAA
GILPDEASEAFRNSSIALQQAQLLKNTGHSRQPSDSSIDKFVSRDEAAEPGDQENKPCRI
KGDIGQSTDDDSAPLVHCVRLLSASFLLTGEKNVLVLDRDVRVSVKALALSCVGAAVALH
PESFFSKLYKVPLDTTEYPEEQYVSDILNYIDHGDPQVRGATAILCGTLIYSILSRSRFH
VGDWMGTIRTLTGNTFSLADCIPLLQKSLKDESSVTCKLACAAVRHCVMSLCSSSYSELG
LQLIIDMLTLRNSSYWLVRTELLETLAEIDFRLVSFLEAKAENLHRGSHHYTGLLKLQER
VLNNVVIYLLGDEDPRVRHVAAASLIRLVPKLFYKCDQGQADPVVAVARDQSSVYLKLLM
HETQPPSHFSVSTITRIYRGYNLLPSITDVTMENNLSRVIAAVSHELITSTTRALTFGCC
EALCLLSTAFPVCVWSLGWHCGMPPLSASDESRKSCTVGMATMILTLLSSAWFPLDLSAH
QDALILAGNLLAASAPKSLRSSWSSEEEVNPTAAKQEEVWPALGDRVLVPMVEQLFSHLL
KVINICAHVLDDVAPGPAIKAALPSLTNPPSLSPIRRKGKEKEPGEQASVQLSPKKGVEA
SAASRQSDTSGPVTTSKSSSLGSFYHLPSYLKLYDVLKATHANYKVTLDLQNTTEKFGAF
LRSALDVLSQILELATLQDIGKCVEEILGYLKSCFSREPMMATVCVQQLLKTLFGTNLAS
QFDSLSSNPSKSQGQAQRLGSSSMRPGLYHYCFMAPYTHFTQALADASLRNMVQTEQEHD
TSGWFDVLQKVSTQLKTNITSVTKNRADKNAIHNHIRLFEPLVIKALKQYTTTTSVQLQK
QVLDLLAQLVQLRVNYCLLDSDQVFIGFVLKQFEYIEVGQFRESEAIIPNIFFFLVLLSY
ERYHSKQIIGIPKIIQLCDGIMASGRKAVTHAIPALQPIVHDLFVLRGANKADAGKELET
QKEVVVSMLLRLIQYHQVLEMFILVLQQCHKENEDKWKRLSRQIADIILPMLAKQQMHID
SHEALGVLNTLFEILAPSSLRPVDMLLRSMFITPNTMASVSTVQLWISGILAILRVLISQ
STEDIVLSRIQELSFSPYLISCPVINRLRDGDNNLTLEEHSEGKQVKNLPEETFSRFLLQ
LVGILLEDIVTKQLKVEMSEQQHTFYCQELGTLLMCLIHIFKSGMFRRVTAAATRLFISD
GCDGSFYTLESLNLRVRSMIPTHPALVLLWCQILLLVNHTDYRWWAEVQQTPKRHSLSST
KLLSPQISGEEEDSDLAAKLGMCNREIVRRGALILFCDYVCQNLHDSEHLTWLIVNHVQD
LIGLSREPPVQDFISAVHRNSAASGLFIQAIQSRCENLSTPTTLKKTLQCLEGIHLSQSG
AVLTLYVDRLLCTPFRVLARMVDILACRRVEMLLAANLQSSVTQLPLEELNRIQEYLQSS
GLAQRHQRLYSLLDRFRVSTIQDSLSPSPPVSSHPLDGDAHVTLETVSPDKDWYIRLVKS
QCWTKSDSALLEGAELVNRIPAEDMSAFMMNPEFNLSLLVPCLSLGMSEISCGQKSPLFE
AARGVILARVTSIVQQLPAVHHVFQSCQPAEPTVYWSKLIDLFGDAVLYQSLTTLARALA
QYLVVISKLPSHLHLPPEKERDMVKFVVLTLEALSWHLIHEQIPLSLDLQAGLDCCCLAL
QLPGLWSVVSSTEFVTHACSLIHCVHFILEAIAVQPGEQLLSPERRVNVPKAIREDEEVD
SSTQNPKYITESCEMVAEMVESLQSVLALGHKKNNSMPAFLTAVLKNIIISLARLPLVNS
YTRVPPLVWKLGWSPKLGGEFGTVFPEIPVEFLQEKEVFKEFIYRINTLGWTSRTQFEET
WATLLGVLVTQPLVMEQEESPPEEDTERTQINVLAVQAITSLVLSAMTVPVAGNPAVSCL
EQQPRNKPLKALDTRFGRKLSVIRGIVEQEIQAMVSKRDNVATHHSYQAWDPVPSLSPAT
TGALISHEKLLLQINPERELGNMSYKLGQVSIHSVWLGNNITPLREEEWDEEEEEEADTP
APSSPPTSPINSRKHRAGVDIHSCSQFLLELYSRWILPSSSARRTPVILVSEVVRSLLVV
SDLFTERNQFEMMYLTLTELRRVHPSEDEILIQYLVPATCKAAAVLGMDKAVAEPVSRLL
ESTLRSSHLPSRIGALHGVLYVLECDLLDDTAKQLIPVISDYLLSNLKGIAHCVNIHSQQ
HVLVMCATAFYLIENYPLDVGPEFSASIIQMCGVMLSGSEESTPSIIYHCTLRGLERLLL
SEQLSRLDAESLVKLSVDRVNVHSPHRAMAALGLMLTCMYTGKEKISPGRSSDPNPVAPD
SESVIVAMERVSVLFDRIRKGFPCEARVVARILPQFLDDFFPPQDVMNKVIGEFLSNQQP
YPQFMATVVYKVFQTLHSTGQSSMVRDWVMLSLSNFTQRTPVAMATWSLSCFFVSASTSP
WVAAILPHVISRMGKLEQVDVNLFCLVATDFYRHQIEEELDRRAFQSVFEVVAAPGSPYH
RLLTCLRNIHKITTC
NT seq
9228 nt
NT seq
+upstream
nt +downstream
nt
atggcgacccttgaaaagctgatgaaggctttcgagtccctgaagtccttccagcagcag
cagcaaaagaaagaactttcagccaccaagaaagatcgtgtgaatcattgtctgacaata
tgtgaaaacatagtggcacagtctctcagaaattctccagaatttcagaaacttctgggc
atcgctatggaactttttctactgtgcagtgatgatgcggagtcagatgtcaggatggtg
gctgacgagtgcctcaacaaagttataaaagctttgatggattctaatcttccaaggtta
cagcttgagctctataaggaaattaaaaagaatggtgcccctcgaagtttgcgagccgca
ctgtggagatttgcagagctggctcacctggttcggcctcagaaatgcaggccttatctg
gtgaaccttctgccatgcctgactcgaactagcaagagaactgaggaatcggtccaagag
accttggctgcagctgttcccaaaattatggcttcttttggcaattttgcaaatgacaat
gaaattaaggttttgttaaaagctttcatagcgaatctgaaatcaaactctcctaccatc
cggcggacagcagctgggtcagcagtgagcatctgccagcactcaagaaggacacagtat
ttttatagctggctactcaacgtgctcttaggtttgctcgttcctgttgaggatgaacat
tccaccctgctgattcttggtgtgctactcacactgaggtacttggtgcccttattgcag
cagcaggttaaggacacgagcctgaaaggcagctttggggtgacgcggaaagaaatggaa
gtctctccctcaacagagcagcttgtccaggtttatgaactgacattgcattatacacag
caccaagaccacaatgtggtgacaggagccctggaactcttgcagcagcttttcagaaca
cccccacctgagctcctacaagctctgaccatggcagggggcatcgggcatctcactgtg
gctaaaaatgagtctggtggtcggagtcgtagtggaagtatcgtagaacttatagctgga
gggggttcctcatgcagccctgtcctttcaagaaaacaaaaaggcaaggtgctcttagga
gaagaagaagctttggaagatgactctgagtcgaggtcagatgtcagcagctctgccttt
gcagcctcagtaaagagtgagattggtggagagctggctgcttcttcaggggtttccact
ccggggtcagtgggtcatgacataatcactgagcagccgcggtcacagcacacgctacag
gcagactcggtggatctggccggctgtgacttgacgagctctgccactgatggagacgag
gaggacatcttaagccacagctccagccaggtcagcgctgtcccatctgaccctgccatg
gacctgaacggtgggacccaggcctcttcacccatcagtgacagctcccagactaccacc
gaagggcctgactcggctgtgaccccttcagacagttctgaaattgtgttagatggtgct
gatagccagtattcgggcatgcagattggacagccccaagatgaagatgaggaagctgca
ggtatacttcctgatgaagcctcagaagctttcagaaactcttcaattgccctccaacaa
gcacagttattaaaaaacacaggtcacagcaggcagccttctgacagcagtatagataag
tttgtgtcaagagatgaagctgctgaacctggtgatcaagaaaacaagccttgccgcatc
aaaggtgacataggacagtctactgatgacgattctgcacctcttgtccattgtgtccgc
cttttatctgcttcatttttgctaacaggggaaaaaaatgtgctggttctggacagggat
gtgagggtcagtgtgaaggccctggccctcagctgtgttggtgcagccgtggctctccat
ccagaatctttcttcagtaaactgtataaagtacctcttgataccacggaatacccagag
gagcagtatgtctcagacatcttgaactacattgatcatggagacccccaggtccgagga
gccactgccattctctgtgggaccctcatctactccatcctcagcaggtcccgcttccat
gtgggagactggatgggcaccattcgaactctgacaggaaatacattttctctggcagat
tgcattcctttgctgcagaaatctttgaaggatgagtcttctgttacttgcaagttggct
tgtgcagctgtgaggcattgtgtcatgagtctctgcagcagcagctatagtgaattggga
ttacagctgatcatcgatatgctgaccctgaggaatagttcctattggctggtgaggaca
gagcttctggaaactcttgcagagattgactttaggctggtgagctttttggaggcaaaa
gcagaaaacttacacagagggtctcatcattatacagggcttttaaaactacaagaacga
gtgcttaataatgttgtcatctatttgcttggggatgaagaccccagggtgcgacatgtt
gctgcagcatcattgattaggcttgtcccaaagctgttttataaatgtgaccaaggtcaa
gctgatccagtagtggctgtggcaagagatcaaagcagtgtttacctgaaacttctcatg
cacgagacgcagcctccatctcacttctccgtcagcacaattaccaggatatatagaggc
tataacttattaccaagcataacagatgtcactatggaaaataacctgtcaagagttatt
gcagcagtttctcatgaactaatcacatcaaccacgagagcactcacgtttggatgctgt
gaagctttgtgtcttctttcaactgccttcccagtttgtgtatggagtttaggttggcat
tgtggaatgccccccttgagtgcctcagatgagtctaggaagagctgtactgtggggatg
gccacaatgattctcacactgctgtcctcagcttggttcccattggatctctcagcccac
caagatgctttgattttggctggaaacttgcttgcagccagtgctcccaaatctctgaga
agttcatggagctctgaagaagaagtcaacccaacagctgccaagcaagaggaggtgtgg
ccggccctgggagaccgggtgctggtgcccatggtggaacaactcttctcccacctgctg
aaggtgattaacatctgtgcacatgtcctagacgatgtggctcctggccctgcaataaag
gcagccttgccttctctaacaaaccccccttctctgagtcccatccgacgaaagggaaag
gagaaagagccaggagaacaagcatctgtccagttgagtcccaagaaaggcgtcgaggcc
agtgcagcttctagacaatctgatacctcaggacctgttacaacaagtaaatcctcatca
ctggggagtttctatcatcttccttcatacctcaaattgtatgatgtcctgaaagctact
catgctaattacaaggtcaccttggatcttcagaacaccacggaaaagtttggggctttt
ttacgctctgccttggatgttctctctcagattctggaactggcgacgctgcaggacatt
gggaagtgtgttgaagagatcctgggatacctgaaatcctgctttagtcgagaaccaatg
atggcaactgtttgtgttcaacaattgttgaagactctctttgggacaaacttggcctcc
cagtttgacagcttatcttccaaccccagcaagtctcaaggccaagcacagcgccttggc
tcctccagcatgaggccaggcttgtatcactactgcttcatggccccgtacacccatttc
acccaggccctcgccgatgccagcctgaggaacatggtgcagacggagcaggaacatgac
acctcaggatggtttgatgttcttcagaaagtgtctacccagttgaagacaaacatcacg
agtgtcacaaagaaccgtgcagataaaaatgctattcataatcacattcgtttatttgag
cctcttgttataaaagctttaaaacagtatacgacaacaacatctgtgcagttacagaag
caggttttagatttgctggcacagctggttcagttacgggtcaattactgtcttctggat
tcagatcaggtgtttattggatttgtgttgaaacagtttgaatacattgaagtgggccag
ttcagggaatcagaggcaattattccaaacatctttttcttcctggtattactatcttat
gaacgctatcattcaaaacagatcattggaattcctaaaatcattcagctctgtgatggc
atcatggctagtgggaggaaggctgtgacacacgctataccagctctgcagcccattgtc
catgacctttttgtgttaagaggagcaaataaagctgatgcaggaaaagagcttgaaacg
caaaaagaggtggtggtatcaatgttactcagactgatccagtaccatcaggtgttggag
atgttcatccttgtcctgcagcagtgccacaaagagaatgaagacaagtggaagcggtta
tctcggcagattgctgacatcatcctcccaatgttagctaaacagcagatgcacattgac
tctcatgaagcccttggagtgctaaatactttatttgagattttggctccttcctccctc
cgtccagtggacatgcttttacgcagtatgttcatcactccaaacaccatggcatctgtg
agcactgttcaactgtggatatcaggaatcctagccattttgagggttctaatttcccag
tcaactgaagatattgttctttctcgtattcaggaactttccttctctccatatttaatc
tcctgtccagtaattaatagattaagagatggggacaataatttaactctggaagaacac
agtgaagggaaacaagtaaagaatttgccagaagaaacgttttcaaggtttctgttacag
ctggttggtattctcttggaggacattgttacaaaacagctgaaggtggaaatgagtgaa
cagcaacatactttctattgtcaagaactaggcacactgctgatgtgtctgatccacatc
tttaagtcgggaatgttccggagagtcacagcagccgccactagactcttcatcagcgat
ggttgtgatggcagtttctacaccctggagagcttgaacctgcgggtgcgctccatgatc
cccacacacccggccctggtgctgctctggtgtcagattctactgctcgtcaaccacact
gactaccgctggtgggcagaggtgcagcagaccccgaaaagacacagtctatccagcaca
aagttactaagtccccagatatctggagaagaagaagattccgacttggcagccaaactt
ggaatgtgcaatagagaaatagtacgaagaggtgctctcattctcttctgtgactatgtt
tgtcagaacctccatgactctgagcacttgacatggctcatcgtgaatcacgttcaagat
ctgatcggcttgtcccgtgaacctccagtgcaggacttcatcagcgccgtccatcggaac
tctgctgccagtggcctttttatccaggctattcaatctcgttgtgaaaacctttcaact
ccaaccactctgaagaagacacttcagtgcttggaagggatccatctcagccagtcgggc
gctgtgcttacactgtatgtggacaggcttctgtgcacccccttccgtgtgctggctcgc
atggtcgatatcctcgcctgtcgccgggtagaaatgcttttggctgcaaacttgcagagc
agtgtgacccagttgccactggaagaactcaacagaatccaggagtaccttcagagcagt
gggctcgcccagagacaccaaaggctttattccctgctggacaggtttcgtgtctccacc
atacaagactcacttagtccctctcctccagtttcttcccacccgctggatggggatgca
catgtgacactggaaacagtgagtccagacaaagactggtacattcgtcttgtcaaatcc
cagtgttggaccaaatcagattctgcactgctggaaggtgcagagctggtgaatcggatt
cctgctgaagatatgagtgccttcatgatgaacccagagttcaacctaagtctgttagtg
ccatgcttaagtctaggcatgagtgaaatttcgtgtggccagaagagtcccctttttgaa
gcagcccgcggggtgattctggcccgtgtgaccagcattgttcagcagctccctgccgtc
caccatgtcttccagtcctgccagcctgcagagccaacggtctactggagcaagttgatt
gacctatttggagatgctgtgctgtatcagtctctgaccactttggcccgggccctggcg
cagtacctagtggtgatctccaagctgcccagtcacttgcaccttcctcctgagaaggag
agggacatggtcaagtttgtggtgttgacccttgaggccctgtcatggcatctgattcat
gagcagatcccattgagtctggatctccaggcaggactggactgctgctgcctggccctg
cagctgccgggcctctggagtgtggtctcctccacagagttcgtgacccatgcctgttcc
ctcatccactgtgtgcacttcattctggaagccattgcagtgcagcctggagagcaactt
cttagcccagaaagaagggtgaatgttccaaaggccatcagagaggatgaggaagtggat
tcaagcacacagaatcctaagtatatcactgaatcctgtgagatggtggcagaaatggtg
gagtctttgcagtcagtgttggcattgggtcataaaaagaacaacagcatgccagcgttt
ctcacagcggtgctcaagaacatcatcatcagcctggcccgcctgcccctggtcaacagc
tatacacgggtgccccccctggtttggaaacttggatggtcacccaagctgggaggggaa
tttggcacggtgttcccggagatccccgtggagttcctccaggaaaaggaggtcttcaag
gagttcatctaccgtatcaacaccctagggtggactagtcgcacccagtttgaagaaact
tgggccacccttcttggcgtcctggtgactcagccccttgtgatggagcaagaggagagc
ccaccagaagaagacacggaaaggacccaaatcaatgtcctggccgtgcaggccatcacc
tccctggtgctcagcgcaatgaccgtgcctgtggctggcaacccagccgtgagctgcttg
gagcagcagccccgcaacaagcctctgaaagctctcgacaccaggtttgggaggaagttg
agcgtcatcagagggattgtagagcaggagattcaagcaatggtttcaaagagagacaat
gttgccacccatcattcgtaccaggcatgggatcctgtcccttccctgtctccagctact
acaggcgccctcatcagccatgagaagctgctgctgcagatcaaccccgagcgagagcta
gggaacatgagctacaagcttggccaggtgtctatacactctgtgtggctggggaacaac
atcacacccctaagggaagaagagtgggatgaggaggaggaggaggaggctgacacgccc
gcaccttcatcaccgcccacatctccaatcaactccaggaaacaccgggctggagttgac
atccactcctgttcgcagtttttgctggagttgtatagtcgctggatcctgccgtctagt
tcagctaggaggacccctgtcattctcgtcagcgaagttgttcgatctcttctagtggtc
tcagacttattcactgaacgcaaccaatttgagatgatgtatttgacgctgacagaactg
cggagggtgcacccttcagaagacgagattcttattcagtacttggtgcctgctacctgt
aaggcggctgctgtccttgggatggacaaggccgtagcggagccggtcagccgcctcctg
gagagcactctcagaagcagccatctgcctagcaggattggagccctgcatggcgtgctc
tacgtgctggagtgtgacctgctggatgacaccgccaagcagcttatcccggtcatcagc
gactatctcctttctaacctcaaaggaattgcccactgtgtgaacattcacagccagcag
cacgtgctggtaatgtgtgccaccgcgttttacctgattgagaactatcctctggatgta
gggccagaattctcagcatcaataatacagatgtgtggggtgatgctgtccggaagcgag
gagtccaccccttccatcatctaccactgcaccctcagaggcctggagcgcctcctactc
tctgagcagctctcccggctggatgcagagtctctggtcaagctcagcgtggacagagtg
aacgtgcacagcccacatcgagccatggcggccctgggcctgatgcttacctgcatgtac
acaggaaaggagaaaatcagtcctggtagaagctccgaccctaatcctgtagccccagac
agcgagtcagtgattgtggctatggagcgggtatctgtacttttcgataggatcagaaag
gggtttccctgtgaagccagagtggtggcaaggatcctgcctcagtttctagatgacttc
tttccaccccaggacgtcatgaacaaagtcatcggagagtttctgtccaaccagcagccg
tacccccagttcatggccactgtggtgtataaggtgttccagactcttcacagcaccggg
cagtcatctatggtccgggactgggtcatgctctccctctccaacttcactcagaggacc
ccagtcgccatggctacatggagcctctcctgcttctttgtcagcgcttccaccagcccg
tgggttgcagccatccttccacatgtcatcagcaggatgggcaagctggagcaggtggac
gtgaaccttttctgcctggtcgccacggacttttacagacaccagatagaggaggagctc
gaccgcagggccttccagtctgtgtttgaggtggtcgctgctccagggagcccataccac
cgtttactgacttgtttgcgaaacatccacaagatcaccacttgctga
DBGET
integrated database retrieval system
