Carlito syrichta (Philippine tarsier): 103258679
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Entry
103258679 CDS
T07836
Symbol
VIM
Name
(RefSeq) vimentin isoform X1
KO
K07606
vimentin
Organism
csyr
Carlito syrichta (Philippine tarsier)
Pathway
csyr04820
Cytoskeleton in muscle cells
csyr05169
Epstein-Barr virus infection
csyr05206
MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:
csyr00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
103258679 (VIM)
09160 Human Diseases
09161 Cancer: overview
05206 MicroRNAs in cancer
103258679 (VIM)
09172 Infectious disease: viral
05169 Epstein-Barr virus infection
103258679 (VIM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csyr03019
]
103258679 (VIM)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
csyr04812
]
103258679 (VIM)
04147 Exosome [BR:
csyr04147
]
103258679 (VIM)
Messenger RNA biogenesis [BR:
csyr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
103258679 (VIM)
Cytoskeleton proteins [BR:
csyr04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
103258679 (VIM)
Exosome [BR:
csyr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
103258679 (VIM)
Exosomal proteins of other cancer cells
103258679 (VIM)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Filament
FKBP15
KIF21A_4th
DUF1664
TolA_bind_tri
HMMR_N
DUF7491
BLOC1_2
DUF684
ANG-1
WEMBL
RBD-FIP
YwqH-like
TPR_MLP1_2
DUF1759
TMF_TATA_bd
GAS
GeBP-like_DBD
CENP-F_leu_zip
CLZ
CCDC92
Sec10_N
T2SSF
DUF4515
DUF4200
Rho_Binding
HALZ
Motif
Other DBs
NCBI-GeneID:
103258679
NCBI-ProteinID:
XP_008054526
UniProt:
A0A1U7TLB9
LinkDB
All DBs
Position
Unknown
AA seq
274 aa
AA seq
DB search
MLQREEAESTLQSFRQDVDNASLARLDLERKVESLQEEIAFLKKLHDEEIQELQAQIQEQ
HVQIDVDVSKPDLTAALRDVRQQYESVAAKNLQEAEEWYKSKFADLSEAANRNNDALRQA
KQESNEYRRQVQSLTCEVDALKGTNESLERQMREMEENFAVEAANYQDTIGRLQDEIQNM
KEEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRISLPLPNFSSLNLRETNLDSLP
LVDTHSKRTLLIKTVETRDGQVINETSQHHDDLE
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgcttcagagagaggaagccgagagcaccctgcaatctttcagacaggatgttgacaat
gcgtctctggcacgtcttgaccttgagcgtaaagtggaatccttgcaagaagagatcgcc
tttttgaagaaactgcatgatgaggaaatccaggagctgcaggcccagatccaggaacag
catgtccagatcgatgtggacgtctccaagcccgacctcacggctgccctacgtgatgta
cgccagcagtatgaaagtgtggctgccaaaaaccttcaggaggcagaagaatggtacaag
tccaagtttgctgacctctctgaggctgctaaccggaacaatgatgccctgcgccaggcg
aagcaggagtccaacgagtaccggagacaggtgcagtccctcacctgtgaagtggatgcc
cttaaaggaactaatgagtccctggaacgccagatgcgtgaaatggaagaaaactttgct
gttgaagctgctaactaccaagacactattggccgcctgcaggatgagattcagaacatg
aaggaagaaatggctcgtcaccttcgtgaataccaagacttgctcaatgtcaagatggct
cttgacatcgagattgccacctacaggaagctgctggaaggcgaggagagcaggatttcg
ctgcctcttccaaacttttcctccctgaacctgagggaaactaacctggattcactccct
ctggttgatactcactcaaaaaggacccttctgattaagacagttgaaactagagatgga
caggttatcaatgaaacttctcagcatcacgatgatcttgaatga
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