KEGG   Carlito syrichta (Philippine tarsier): 103258679
Entry
103258679         CDS       T07836                                 
Symbol
VIM
Name
(RefSeq) vimentin isoform X1
  KO
K07606  vimentin
Organism
csyr  Carlito syrichta (Philippine tarsier)
Pathway
csyr04820  Cytoskeleton in muscle cells
csyr05169  Epstein-Barr virus infection
csyr05206  MicroRNAs in cancer
Brite
KEGG Orthology (KO) [BR:csyr00001]
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    103258679 (VIM)
 09160 Human Diseases
  09161 Cancer: overview
   05206 MicroRNAs in cancer
    103258679 (VIM)
  09172 Infectious disease: viral
   05169 Epstein-Barr virus infection
    103258679 (VIM)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csyr03019]
    103258679 (VIM)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:csyr04812]
    103258679 (VIM)
   04147 Exosome [BR:csyr04147]
    103258679 (VIM)
Messenger RNA biogenesis [BR:csyr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Factors that have mRNA localization signals
     103258679 (VIM)
Cytoskeleton proteins [BR:csyr04812]
 Eukaryotic cytoskeleton proteins
  Intermediate filaments
   Intermediate filaments
    Type III
     103258679 (VIM)
Exosome [BR:csyr04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   103258679 (VIM)
  Exosomal proteins of other cancer cells
   103258679 (VIM)
SSDB
Motif
Pfam: Filament FKBP15 KIF21A_4th DUF1664 TolA_bind_tri HMMR_N DUF7491 BLOC1_2 DUF684 ANG-1 WEMBL RBD-FIP YwqH-like TPR_MLP1_2 DUF1759 TMF_TATA_bd GAS GeBP-like_DBD CENP-F_leu_zip CLZ CCDC92 Sec10_N T2SSF DUF4515 DUF4200 Rho_Binding HALZ
Other DBs
NCBI-GeneID: 103258679
NCBI-ProteinID: XP_008054526
UniProt: A0A1U7TLB9
LinkDB
Position
Unknown
AA seq 274 aa
MLQREEAESTLQSFRQDVDNASLARLDLERKVESLQEEIAFLKKLHDEEIQELQAQIQEQ
HVQIDVDVSKPDLTAALRDVRQQYESVAAKNLQEAEEWYKSKFADLSEAANRNNDALRQA
KQESNEYRRQVQSLTCEVDALKGTNESLERQMREMEENFAVEAANYQDTIGRLQDEIQNM
KEEMARHLREYQDLLNVKMALDIEIATYRKLLEGEESRISLPLPNFSSLNLRETNLDSLP
LVDTHSKRTLLIKTVETRDGQVINETSQHHDDLE
NT seq 825 nt   +upstreamnt  +downstreamnt
atgcttcagagagaggaagccgagagcaccctgcaatctttcagacaggatgttgacaat
gcgtctctggcacgtcttgaccttgagcgtaaagtggaatccttgcaagaagagatcgcc
tttttgaagaaactgcatgatgaggaaatccaggagctgcaggcccagatccaggaacag
catgtccagatcgatgtggacgtctccaagcccgacctcacggctgccctacgtgatgta
cgccagcagtatgaaagtgtggctgccaaaaaccttcaggaggcagaagaatggtacaag
tccaagtttgctgacctctctgaggctgctaaccggaacaatgatgccctgcgccaggcg
aagcaggagtccaacgagtaccggagacaggtgcagtccctcacctgtgaagtggatgcc
cttaaaggaactaatgagtccctggaacgccagatgcgtgaaatggaagaaaactttgct
gttgaagctgctaactaccaagacactattggccgcctgcaggatgagattcagaacatg
aaggaagaaatggctcgtcaccttcgtgaataccaagacttgctcaatgtcaagatggct
cttgacatcgagattgccacctacaggaagctgctggaaggcgaggagagcaggatttcg
ctgcctcttccaaacttttcctccctgaacctgagggaaactaacctggattcactccct
ctggttgatactcactcaaaaaggacccttctgattaagacagttgaaactagagatgga
caggttatcaatgaaacttctcagcatcacgatgatcttgaatga

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