KEGG   Carlito syrichta (Philippine tarsier): 103258702
Entry
103258702         CDS       T07836                                 
Symbol
RFC4
Name
(RefSeq) replication factor C subunit 4
  KO
K10755  replication factor C subunit 2/4
Organism
csyr  Carlito syrichta (Philippine tarsier)
Pathway
csyr03030  DNA replication
csyr03410  Base excision repair
csyr03420  Nucleotide excision repair
csyr03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:csyr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    103258702 (RFC4)
   03410 Base excision repair
    103258702 (RFC4)
   03420 Nucleotide excision repair
    103258702 (RFC4)
   03430 Mismatch repair
    103258702 (RFC4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:csyr03032]
    103258702 (RFC4)
   03036 Chromosome and associated proteins [BR:csyr03036]
    103258702 (RFC4)
   03400 DNA repair and recombination proteins [BR:csyr03400]
    103258702 (RFC4)
DNA replication proteins [BR:csyr03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    103258702 (RFC4)
  DNA Replication Termination Factors
   ELG1-RFC complex
    103258702 (RFC4)
Chromosome and associated proteins [BR:csyr03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    103258702 (RFC4)
DNA repair and recombination proteins [BR:csyr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     103258702 (RFC4)
  Check point factors
   HRAD17(Rad24)-RFC complex
    103258702 (RFC4)
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 RCF1-5-like_lid Rad17 DUF815 AAA_assoc_2 AAA_16 AAA_22 AAA_30 AAA_11 AAA_24 Mg_chelatase RuvB_N AAA_28 SLFN-g3_helicase AAA_19 AAA_5 Viral_helicase1 ResIII HrcA_DNA-bdg Gp44_lid AAA_7
Other DBs
NCBI-GeneID: 103258702
NCBI-ProteinID: XP_008054555
Ensembl: ENSTSYG00000013051
UniProt: A0A1U7T9S5
LinkDB
Position
Unknown
AA seq 363 aa
MQAFLKGTSISTKPPLSKDRGVAATAGSSGENKKAKPVPWVEKYRPKCVDEVAFQEEVVA
VLKKSLEGADLPNLLFYGPPGTGKTSTILAAARELFGPELFRLRVLELNASDERGIQVVR
EKVKNFAQLTVSGSRSDGKPCPPFKIVILDEADSMTSAAQAALRRTMEKESKTTRFCLIC
NYVSRIIEPLTSRCSKFRFKPLSDKIQQQRLLDIAEKENVKISSEGIAYLVKVSEGDLRK
AITFLQSATRLTGGKIIEKVITDIAGVIPAETIDGVFAACQSGSFDKLEAVVKDLIDEGH
AATQLVNQLHDVIVENDDLSDKQKSIITEKLAEVDKCLADGADEHLQLISLCATIMQQLT
QNC
NT seq 1092 nt   +upstreamnt  +downstreamnt
atgcaggcatttttaaaaggcacttctattagtactaagccaccattgagcaaggatcga
ggagtagctgccactgcaggaagcagtggagagaacaagaaagccaaacctgttccctgg
gtggaaaaatatcgtccaaaatgtgtggatgaagttgctttccaggaggaagtggttgca
gtactgaaaaagtctttagaaggagccgatctccctaatctcttgttttatggaccacct
ggaactggaaaaacatccactattttggcagcagctagagaactttttgggcctgaactt
tttcgattaagagttcttgagttaaatgcatccgatgaacgtggaatacaagttgttcga
gagaaagtgaaaaactttgcacaattaactgtatcaggaagtcgttccgatgggaagcca
tgtcctccttttaagattgtgattttggacgaagcagattctatgacctcagctgctcag
gcagctttaagacgcaccatggaaaaagagtctaaaactacccgattttgtctcatctgt
aactatgttagtcgaataattgaacccctgacctctagatgttcaaaatttcgcttcaag
cctctgtcagataaaattcaacagcagcgattattagacattgctgagaaggaaaacgtc
aaaattagcagtgagggaatagcttatcttgttaaagtgtcagaaggagatttaagaaaa
gccattacatttcttcaaagtgctactcgattaacaggtggaaagatcatagagaaagtg
attacagacattgctggggtaataccagccgagacaattgatggggtatttgctgcgtgt
caaagtggctcttttgacaaactagaagctgtggtaaaggatttaatagatgagggtcat
gcagcaactcaactggtaaatcaacttcatgatgtgatcgtagaaaatgatgacctttct
gataaacagaagtccattattacagaaaaacttgctgaagttgataaatgcttagcggat
ggtgctgatgaacaccttcaattgatcagcctttgtgcaaccatcatgcagcagttaaca
cagaattgttag

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