Carlito syrichta (Philippine tarsier): 103258991
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Entry
103258991 CDS
T07836
Symbol
YTHDC2
Name
(RefSeq) probable ATP-dependent RNA helicase YTHDC2
KO
K20099
ATP-dependent RNA helicase YTHDC2 [EC:
5.6.2.6
]
Organism
csyr
Carlito syrichta (Philippine tarsier)
Brite
KEGG Orthology (KO) [BR:
csyr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csyr03041
]
103258991 (YTHDC2)
Enzymes [BR:
csyr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
103258991 (YTHDC2)
Spliceosome [BR:
csyr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
103258991 (YTHDC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
YTH
OB_NTP_bind
HA2_C
Helicase_C
R3H
DEAD
Ank_2
HA2_N
AAA_19
nSTAND3
Ank
AAA_22
ATPase
PhoH
AAA_16
AAA_7
UvrD-helicase
Ank_4
AAA_29
ABC_tran
T2SSE
SRP54
AAA_23
Motif
Other DBs
NCBI-GeneID:
103258991
NCBI-ProteinID:
XP_021567328
Ensembl:
ENSTSYG00000009634
UniProt:
A0A3Q0E027
LinkDB
All DBs
Position
Unknown
AA seq
1366 aa
AA seq
DB search
MEFPSSLTSTERAFIHRLSQSLGLVSKSKGKGANRYLTVKKKDGSETAHAMMTCNLTHNT
KHAVRSLIQRFPVTNKERTELLPKTERGNVFAVEAENREMSKTSGRLNNGIPQIPVKRGE
SEFDSFRQSLPVFEKQEEIVKIIKENKVVLIVGETGSGKTTQIPQFLLDDCFKNGIPCRI
FCTQPRRLAAIAVAERVAAERRERIGQTIGYQIRLESRVSPKTLLTFCTNGVLLRTLMAG
DSTLSTVTHVIVDEVHERDRFSDFLLTKLRDLLQKHPTLKLILSSAALDVNLFIRYFGSC
PVIYIQGRPFEVKEMFLEDILRTTGYTNKEMLKYKKEKQQEEKQQTTLTEWYSAQENTFS
PESQRQRTVPSVTEEYDLLDDGGDVVFSQLTEKDVNCLEPWLIKEMDACLSDIWLHKDVD
AFAQVFHLILTENVSVDYRHSETSATALMVAAGRGFASQVEQLISMGANVHSRASNGWMA
LDWAKHFGQTEIVDLLESYSASLEFGNLDESSLVQTSGNDLSAEDRELLKAYHHSFDDEK
VDLDLIMHLLYNICHSCDAGAVLIFLPGYDEIVGLRDRILFDDKRFADNAHRYQVFMLHS
NMQTSDQKKVLKNPPAGVRKIILSTNIAETSITVNDVVFVIDSGKVKEKSFDALNFVTML
KMVWISKASAIQRKGRAGRCRPGICFRLFSRLRFQNMLEFQTPELLRMPLQELCLHTKLL
APVNCPIADFLMKAPEPPPALIVRNAVQMLKIIDAMDAWEDLTELGYHLADLPVEPHLGK
MVLCAVVLKCLDPILTIACTLAYRDPFVLPTQASQKRAAMLCRKRFTAGTFSDHMALLRA
FQAWQKARSDGWERAFCEKNFLSQATMEIIIGMRTQLLGQLRASGFVRARGGGDIRDVNT
NSENWAVVKAALVAGMYPNLVHVDRENVVLTGPKEKKVRFHPTSVLSQPQYKKIPPANGQ
AAAIQALPTDWLIYDEMTRAHRIANIRCCSAVTPVTVLVFCGPARLASNALQEPSSFRAD
GIPNDSSDSEMEDRTTANLAALKLDEWLSFKLEPEAASLLLQLRQKWHSLFLRRMRAPSK
PWSQVDEATIRAIIAVLSSEEQSAGLQQPSGIGQRPRPMSSEELPLASSWRSNNSRKSSA
DTEFSDESTAERILMKSPSSTLHPPQKYKDRGILHPKRNVDDRSDQSSVKSTDSSSYPSP
CASPSPPSSGKGSKSPSPRPNMPIRYFIMKSSNLRNLEISQQKGIWSTTPSNERKLNRAF
WESSMVYLVFSVQGSGHFQGFSRMSSEIGREKSQDWGSAGLGGVFKVEWIRKESLPFQFA
HHLLNPWNDNKKVQISRDGQELEPQVGEQLLQLWERLPLGEKTTTD
NT seq
4101 nt
NT seq
+upstream
nt +downstream
nt
atggaatttccttcttctttgaccagtaccgaaagagccttcattcatcgattgagtcaa
tctcttggtttggtctctaaaagtaaaggaaagggagcaaatagatacctaactgtgaag
aagaaagatggatcagaaacagctcatgcaatgatgacctgtaatttgactcataataca
aaacatgctgttaggagcctaattcagagatttcctgtcaccaataaagagcgtactgaa
cttctgcctaaaacagaaagaggaaatgtgtttgcagttgaagctgaaaaccgggaaatg
agcaagacaagtgggcgactcaacaatggcatacctcagattccagtgaaaagaggagaa
tccgaatttgattctttcaggcaatctttaccagtatttgagaaacaagaagaaattgtt
aaaataattaaggaaaataaagtagttttgattgtaggagaaactgggtctggaaagacc
acacagattcctcagttccttttagatgattgttttaaaaatggtataccctgccgtata
ttttgcactcaaccaagaagattagcagctattgctgtggctgaaagagttgctgcagag
agaagggaaaggattggtcaaacaattggttatcagatccgattagaaagcagggtttct
ccaaagacacttctgacattttgcactaatggggtattgcttcgtactctgatggcagga
gatagtacattgtcaactgtgacacatgttattgtggatgaagtgcatgaaagggatcga
tttagtgattttttacttacaaaattaagagatttgttgcaaaaacacccaactttgaaa
ctaattctttctagtgctgccttggatgtaaatctttttataagatattttggaagttgt
ccagtgatatatatacagggaagaccatttgaagtcaaagaaatgtttctggaagacatt
ttaagaactactggatatacaaacaaagaaatgttaaagtacaaaaaggagaaacagcaa
gaagagaaacaacaaaccacacttacagaatggtactcagctcaagaaaatactttcagt
cctgaatctcagaggcagagaactgttccaagtgtaactgaagagtatgatttattggat
gatggtggtgatgttgtcttcagtcagttgacagaaaaagatgtaaattgccttgaacca
tggttaataaaagaaatggatgcttgtctttctgacatatggctccataaagatgttgat
gcctttgcccaggtctttcatcttattttaactgaaaatgttagtgttgattacagacat
agtgagaccagtgccacagctctaatggttgctgcaggacgaggttttgcaagtcaagta
gagcagttaattagtatgggagccaatgtccatagtagagcatcaaatggctggatggct
ttagattgggctaaacactttgggcagactgaaattgtggatcttctggaatcttacagt
gcttcattggaatttggaaatctagatgaaagttctctggttcagacaagtggaaatgat
ctcagtgccgaagacagagagctcctgaaagcttatcatcatagttttgatgatgaaaaa
gtagacttggatttgatcatgcatcttctgtacaatatctgccatagttgtgatgctggt
gcagtgttaattttcctacctggatatgatgaaattgttggactgagggatcgcatccta
tttgatgacaagcgatttgctgacaatgcacatagatatcaagtctttatgcttcattca
aatatgcaaacatctgatcaaaagaaggtattaaaaaaccctccagcaggtgttcgaaaa
ataatcctttccaccaatattgctgaaaccagcatcacagtcaatgatgttgtctttgtt
attgattctggtaaggtaaaagagaaatcctttgatgcactgaattttgttacaatgtta
aaaatggtgtggatttccaaagctagtgctatacagcgaaaaggcagggcggggcggtgt
agacctggaatttgtttccgtctgttcagtaggctccgattccagaatatgttggaattt
cagactccagaacttttgagaatgccattacaggaactttgcttacataccaagctgtta
gccccagttaattgtcctattgctgatttccttatgaaagctcctgaacctccacctgct
ttaattgtaagaaatgctgtacaaatgcttaagataatagatgcaatggatgcatgggaa
gatctgactgaacttgggtatcatttggctgacttgccagtagaaccgcatcttggtaaa
atggttctgtgtgctgttgttttaaagtgtctggaccccatccttacaattgcctgcacg
ctagcttatcgagatccttttgtactacctactcaggcctctcagaaacgtgcagctatg
ctttgtaggaaacgtttcactgcaggaactttcagtgaccatatggcacttctcagagca
ttccaggcatggcagaaagcacgaagtgatgggtgggagcgagccttttgtgagaaaaat
tttctttcacaagctactatggaaataatcataggcatgagaacacagttgcttggtcaa
cttagagcatcaggttttgttagagcacgaggtggtggtgacattcgcgatgttaacaca
aactctgagaactgggctgtcgttaaagctgcgttggtggcaggcatgtatcctaattta
gtccatgtggacagagagaatgtagtattgacagggccaaaggagaaaaaagtacgcttt
catcccacttcagttctcagccagcctcaatataaaaagattcctccagccaatggtcaa
gctgcagcaattcaggcactgcccacagattggcttatctatgatgaaatgacaagagcc
catagaatagcgaatattagatgctgttcagcagtgacacctgtcactgtattggtattc
tgcggaccagctaggctagcaagtaatgctcttcaggaaccttcatcctttagagcagat
ggcattcccaatgatagtagtgatagtgaaatggaggacagaactactgctaatttggca
gccttgaaacttgatgagtggctcagtttcaaattagagccagaggcagccagtttattg
ctgcagctcagacagaagtggcacagcttatttttacgccgaatgagagctccatctaaa
ccttggtctcaagttgatgaagccaccataagagcaattatagctgttttaagcagtgaa
gaacagtctgcaggtttacaacaaccatctgggattggccaaaggccaaggcctatgtct
tcagaagaacttcccttggcctcatcttggaggtcaaataatagtaggaaaagttcagca
gatactgaattttctgatgaatctactgcagaaagaatattgatgaaatctccatcttca
acattacacccacctcagaagtacaaagatagaggaattttacatcctaaacgaaatgtt
gatgaccgatcagatcaatcttctgtgaaatctacagacagtagtagttacccaagcccc
tgtgccagtccttctcctccatcctcaggaaagggctcaaaatctccttcaccaagacca
aacatgcctattcgatacttcataatgaagagtagcaatttgagaaaccttgaaatttct
caacagaagggcatctggtctacaacccctagtaatgagcggaagctaaatcgagccttt
tgggaaagcagcatggtttacttggtattttctgttcaaggatctggacatttccaggga
ttttctaggatgtcctctgagattggaagggagaagagccaggactggggctctgctgga
ctgggaggagtatttaaggtggagtggatacgaaaagaaagtcttccctttcagtttgca
caccatttactcaatccatggaatgacaacaagaaggttcagataagcagagatgggcag
gaactagagcctcaggttggtgaacagttgctccagttatgggaacgccttcccttggga
gaaaaaaccacaactgattga
DBGET
integrated database retrieval system
