Carlito syrichta (Philippine tarsier): 103259265
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Entry
103259265 CDS
T07836
Symbol
RAD50
Name
(RefSeq) DNA repair protein RAD50
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
csyr
Carlito syrichta (Philippine tarsier)
Pathway
csyr03440
Homologous recombination
csyr03450
Non-homologous end-joining
csyr04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
csyr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
103259265 (RAD50)
03450 Non-homologous end-joining
103259265 (RAD50)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
103259265 (RAD50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
csyr03032
]
103259265 (RAD50)
03400 DNA repair and recombination proteins [BR:
csyr03400
]
103259265 (RAD50)
DNA replication proteins [BR:
csyr03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
103259265 (RAD50)
DNA repair and recombination proteins [BR:
csyr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
103259265 (RAD50)
BRCA1-C complex
103259265 (RAD50)
NHEJ (non-homologous end-joining)
MRX complex
103259265 (RAD50)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
Rad50_zn_hook
AAA_21
SbcC_Walker_B
AAA_15
SMC_N
DUF2703
AAA_29
Motif
Other DBs
NCBI-GeneID:
103259265
NCBI-ProteinID:
XP_008055136
Ensembl:
ENSTSYG00000007636
UniProt:
A0A1U7TN14
LinkDB
All DBs
Position
Unknown
AA seq
1312 aa
AA seq
DB search
MSRIEKMSILGVRSFGIEDKDKQIITFFSPLTILVGPNGAGKTTIIECLKYICTGDFPPG
TKGNTFVHDPKIAQETDVRAQIRLQFRDVNGELVAVQRSMVCTQKNKKTEFKTLEGVITR
TKYGERVSLSSKCAEIDREMISSLGVSKSVLNNVIFCHQEDSNWPLSEGKALKQKFDEIF
SATRYIKALETLRQVRQTQGQKVKECQTELKYLKQNKEKASEIRDQITSKEAQLASSKEI
VKSYENELDPLKNRLKEIEHNLSKVMRLDNEIKALDSRKKQMEKDNSELEQKMEKVFQGT
DEQLNDLYHNHQRTVREKEKRLVDCQRELEKSHKESCLLNQEKSELLVEQGRLQLQADRH
QEHIEARDSLIQSLATQLELDGFEHGPFNERQIKNFHKLVRERLEREAETASQLMNDFAE
KETLKQKQIDEIRDKKTGLGRIIELKSEILNKKKNELKNVKYELQQLEGSSDRIVELDQE
LTKTERELRKAEENCSVETLKADVINLQNKKADLDRTLRKLDQEMEQLNHHTTTRTQMEM
LTKDKADKDEQIRKIKSRHNDDLTSLLGYFPNKKQLEDWLHSKSKEINQTRNRLAKLNKE
LASSEQNKSHISNELKRKEEQLSNYEDKLFDVCGSQDFESDLDRLKEDIEKSSKQRAVLA
GATAVYSQFITQLTDENQSCCPICQRVFQTEAELQDVISDLQSKLRLAPDKLKSTESELK
KKEKRRDEMLGLVPMRQNIIDLKEKEIPELRNKLQNVNRDIQRLKNDIEEQETLLGTIMP
EEESAKVCLTDVTIMERFQMELKDVERKIAQQTAKLQGIDLHRTVQQVNQEKQEKQHMLD
TVSSKIELNRKLIQDQQEQIQHLKSTANELKSEKLQLSTNLQHRQQLEEQSVELSTEVQS
LYREIKDAKEQVNPLETTLEKFQQEKEELINRKNTSNKIAQDKLNDIREKVKNIHSYMKN
IENYIQDGKDNYKKQKENELNKIIAQLSECEKHKEKISKEMGIMRQDIDTQKIQERWLQD
NLTLRKRNEELKEVEEERKQHLKEMGQMQVLQMKNEHQKLEENIDSIKRNHSLALGRQKG
YEEEIIHFKKELREPQFRDAEEKYREMMIVMRTTELVNKDLDVYYKTLDQAIMKFHSMKM
EEINKIIRDLWRSTYRGQDIEYIEIRSDADENVSASDKRRNYNYRVVMLKGDTALDMRGR
CSAGQKVLASLIIRLALAETFCLNCGLLALDEPTTNLDRENIESLAHALVEIIKSRSQQR
NFQLLVITHDEDFVELLGRSEYVEKFYRIKKNAYQCSEIVKCSMRSMEFNAH
NT seq
3939 nt
NT seq
+upstream
nt +downstream
nt
atgtcccggatcgaaaagatgagcattctgggcgtgcggagttttggaatagaggacaaa
gataagcaaataatcactttcttcagcccccttacaattttggttggacccaatggggcg
gggaagacgaccatcattgaatgtctaaaatatatttgtactggagatttccctcctgga
actaaaggaaatacgtttgttcacgatcctaagattgctcaagaaacagatgtgagagcc
cagattcgtttgcaatttcgtgatgtcaatggagaacttgtagctgtgcaaagatctatg
gtgtgtactcagaaaaataaaaagacagagtttaaaaccctggaaggagtcattactaga
acaaagtatggcgaaagggtcagtctaagctctaagtgtgcagaaattgaccgagaaatg
ataagttctctcggagtttccaagtctgtgctaaataatgtcattttctgtcaccaagaa
gattctaattggcctttaagtgaaggaaaggctctgaagcaaaagtttgatgagattttt
tcagcaacaaggtacattaaagccttggaaacacttcggcaggtacgtcaaacacaaggt
cagaaagtaaaagaatgtcaaacagaactaaaatatctgaagcagaacaaggaaaaagct
tctgagattcgtgatcagattactagtaaggaagcccagttagcatcttcaaaggaaatt
gtcaaatcctatgagaatgaacttgatccattgaagaaccgtctaaaagaaattgaacac
aatctctctaaagtgatgagacttgacaatgaaattaaagccttggatagccgaaagaag
caaatggagaaagataatagtgaactggaacagaaaatggaaaaggtttttcaaggaact
gatgaacaactaaatgacttgtatcacaatcaccaaagaacagtgagggagaaagaaaag
agattggtagactgtcagcgtgaactggaaaaatcgcataaagaatcttgtcttctaaat
caagaaaaatcagaactcctcgttgaacagggccgtctacagctacaagcagatcgccat
caagaacatattgaagctagagattcattaattcagtctttggcaacacagctagaattg
gatggctttgagcatggaccattcaatgaaagacagattaaaaattttcacaaacttgtg
agagagagactagaaagggaagcagaaactgccagccaactgatgaatgactttgcagaa
aaagaaactctgaaacaaaaacagatagacgagataagggataaaaaaactggactggga
agaataattgagctaaaatcagaaatcctaaataagaagaagaatgagctgaaaaatgtg
aagtacgaattacagcagttggaaggatcttcagacaggattgttgaactggaccaggag
ctcacaaaaactgaacgtgagctaaggaaagctgaggaaaactgcagtgtagaaacccta
aaagcagacgtaataaaccttcaaaataagaaagcagatctagacaggaccctgcgtaaa
ttggaccaggagatggagcagttaaaccatcatacaacaacacgcacccagatggagatg
ctgaccaaagacaaagctgacaaagatgaacaaataaggaaaataaaatctaggcacaat
gatgacttaacttcactgttggggtattttcccaacaaaaaacagcttgaagactggctt
catagtaaatcaaaagaaattaatcagaccaggaacagacttgccaaattgaacaaggaa
ctagcttcatctgagcaaaataaaagtcatataagtaatgagctaaaaagaaaggaagag
cagttatccaattatgaagacaagctgtttgatgtttgtggtagccaggattttgaaagt
gatttagacaggcttaaagaggatatcgaaaaatcctcaaaacagcgagccgtgctggct
ggagccacggcagtttactcccaattcattactcagctaacagatgaaaaccagtcatgt
tgccctatctgtcagagagtttttcagacagaggctgaattacaagatgtcatcagtgat
ctacagtctaagctgcgacttgctccagataaactcaagtcaacagaatcagagctaaag
aaaaaggagaagcggcgtgatgaaatgctgggacttgtgcccatgaggcaaaacataatt
gatttgaaggagaaggaaataccagaattaagaaacaaattgcagaatgtcaatagagac
atacaacgcctaaagaatgacatagaagaacaagaaacactcttgggtaccataatgcct
gaagaagaaagtgctaaagtatgtcttacagatgtcacaattatggagagattccagatg
gaacttaaagatgttgaaagaaaaattgcacaacaaacagctaagctacaaggaatagac
ttacatcgaactgttcaacaagtaaaccaggaaaaacaagagaaacaacacatgttagat
acagtttctagtaagattgaattgaatcgtaagcttatacaggaccagcaggaacagatt
caacacctaaaaagtacagcaaatgaactaaaatcagagaaacttcagctatccactaat
ttgcaacatcgtcagcaactggaggaacagtctgtggaattgtccactgaagttcagtct
ttatacagagagataaaggatgctaaagagcaggtaaaccctttggaaacaacattagaa
aagttccagcaggaaaaagaagaattaatcaacagaaaaaatacaagcaacaaaatagca
caagacaaattgaatgatatcagagagaaggttaagaatattcatagttatatgaaaaac
attgagaattatattcaagatgggaaagacaactataagaagcaaaaagaaaatgaactt
aataaaataatagctcaactaagtgaatgtgagaaacacaaagaaaaaataagtaaagaa
atgggaatcatgagacaagatattgatacacagaagatacaagaaaggtggctacaggac
aaccttactttaagaaaaagaaatgaggaactaaaagaagttgaagaagaaagaaagcaa
catttgaaggaaatgggtcaaatgcaggttttgcaaatgaaaaatgaacatcagaagttg
gaagagaacatagacagtataaaaagaaatcacagtttggcattagggcgacagaagggt
tatgaggaagaaattatccattttaagaaagaacttcgagaacctcaatttcgggatgcc
gaggaaaagtatagagaaatgatgattgttatgagaacaacagagcttgtgaataaggat
ctggacgtttattataagacccttgaccaagcaataatgaaatttcacagtatgaaaatg
gaagaaatcaataagattatccgtgatctttggcgaagtacctatcgaggacaagatatt
gaatacatagaaatacggtctgatgctgatgaaaatgtatcagcttctgataaaaggcgg
aattacaactaccgcgtggtgatgctgaaaggagacactgccttggatatgcgaggacga
tgcagtgctggacaaaaggtattggcgtcactcatcattcgcctggccttggctgaaacc
ttctgcctcaattgtggccttcttgccttggatgagccaacgacaaacctcgaccgagaa
aacattgaatctctcgcacatgctctggttgagataataaaaagtcgttcacaacagcgt
aactttcagcttctggtaatcactcacgatgaagattttgtggagcttctaggacgttct
gaatatgtggagaaattctacaggattaagaagaacgcttaccaatgctcagagattgtg
aaatgcagtatgcgctccatggaatttaatgctcactga
DBGET
integrated database retrieval system
