KEGG   Carlito syrichta (Philippine tarsier): 103259283
Entry
103259283         CDS       T07836                                 
Name
(RefSeq) collagen alpha-4(IV) chain
  KO
K06237  collagen type IV alpha
Organism
csyr  Carlito syrichta (Philippine tarsier)
Pathway
csyr04151  PI3K-Akt signaling pathway
csyr04382  Cornified envelope formation
csyr04510  Focal adhesion
csyr04512  ECM-receptor interaction
csyr04518  Integrin signaling
csyr04820  Cytoskeleton in muscle cells
csyr04926  Relaxin signaling pathway
csyr04933  AGE-RAGE signaling pathway in diabetic complications
csyr04974  Protein digestion and absorption
csyr05146  Amoebiasis
csyr05165  Human papillomavirus infection
csyr05200  Pathways in cancer
csyr05222  Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:csyr00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04151 PI3K-Akt signaling pathway
    103259283
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    103259283
   04518 Integrin signaling
    103259283
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    103259283
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    103259283
 09150 Organismal Systems
  09152 Endocrine system
   04926 Relaxin signaling pathway
    103259283
  09154 Digestive system
   04974 Protein digestion and absorption
    103259283
  09158 Development and regeneration
   04382 Cornified envelope formation
    103259283
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    103259283
  09162 Cancer: specific types
   05222 Small cell lung cancer
    103259283
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    103259283
  09174 Infectious disease: parasitic
   05146 Amoebiasis
    103259283
  09167 Endocrine and metabolic disease
   04933 AGE-RAGE signaling pathway in diabetic complications
    103259283
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:csyr04147]
    103259283
   00536 Glycosaminoglycan binding proteins [BR:csyr00536]
    103259283
Exosome [BR:csyr04147]
 Exosomal proteins
  Exosomal proteins of other cancer cells
   103259283
Glycosaminoglycan binding proteins [BR:csyr00536]
 Heparan sulfate / Heparin
  Extracellular matrix molecules
   103259283
SSDB
Motif
Pfam: Collagen C4
Other DBs
NCBI-GeneID: 103259283
NCBI-ProteinID: XP_008055157
Ensembl: ENSTSYG00000002382
UniProt: A0A1U7TQ29
LinkDB
Position
Unknown
AA seq 1792 aa
MAAEKEPVALTWVREQGGGLRLRVLMFSFFLGRRNRGGSGLPVRVEPDVKGGAVPSVQLG
STEVDFNPRHRTSLANENLLEEKRREEKIGRIFLKCQDLPVKSSACIVLMRCFFRWTKPL
ATDPWLLIFILFSVQHVYGSGKKYIGPCGGRDCFVCQCFPEKGSRGQPGPPGPQGPIGPL
GPRGPTGIPGEKGMRGDSGPLGAAGYKGDKGPTGVPGFPGLDGLPGHPGPPGPRGKPGVN
GYNGSRGDPGFPGGRGAPGPGGPPGYPGEKGEKGNSVFILGAIKGIQGDRGDPGLPGLPG
SRGARGPAGPMGYPGEPGLAGPLGHPGRPGLKGNPGVGVKGQMGDPGEVGQQGSPGPTLL
VEPPDFCLYKGEKGIKGIPGMIGLPGPPGRKGEPGIGAKGEKGLPGFPGPRGEPGSHGSP
GFPGLKGEPGLVGGPGLLGFLGPKGDPGDRGQPGPPGVLVTPAPLLKGPLGDPGFPGHYG
ETGAIGPPGPPGLPGRPGEACAGMIGPPGPQGFPGHPGLPGSAGIPGRPDTAPGKPGSPG
PPGMPGAPGLQGLPGSDVIYCSAGHPGSQGIKGKVGPPGGRGSKGEKGNEGLCACKPGPM
GLPGSPGLPGRQGTKGDLGLPGWLGEKGDPGPPGAEGSPGLPGKTGASGPPGDKGAKGDM
VVSRVKGHKGERGPDGPPGFPGQSGTHGRDGYPGEKGDPGPPGDHEDAAPGGKGFPGPPG
PPGKVGPVGTPGLGFPGPPGERGRPGVPGRPGVRGPDGLKGQKGDTISCNVTYPGRPGPP
GLDGPPGPKGFPGPYGAPGRRCLDGQKGQRGKPGISEMRGPPGFRGDMGDPGFGGEKGSS
LVGPPGPPGSPGMHGQKGIPGDPAFGHPGPPGKRGLSGLPGTKGSKGEPGCPGAEGADGI
PGFPGRKGPKGREGSVGFPGVPGPPGHSCERGAPGMPGQPGLPGPMGSPGAPGGKGQPGD
RGPPGPVGMKGLPGLPGLPGTHGPPGSPGVPGPFGDDGPPGLPGPKGLQGLPGFQGFPGE
RGKPGPEGYPGRKGEPGEKGCPGFPGDQGMRGGKGARGPSGDEGEMAIVSKKGKPGEPGS
PGDDGFPGERGDKGSPGIQGRRGEPGRHGPPGFHRGEPGRKGQPGPPGSPGLPGSPGLRG
IIGFPGFPGDQGELGSPGPPGFSGTDGARGPKGKKGDPASHFGPPGPKGEPGSPGCQGHV
GAPGEQGLPGVQGPHGPPGRPGLPGSSGSPGCPGDQGMPGLKGHPGEMGGPGPRGLQGDP
GTPGPPGMKGPSGLPGLNGLHGLKGQKGTKGASGLHDMGPPGPVGIPGLKGETGDPGSPG
ISPPGLSGEKGPLGPPGRPGPPGPAGSTGRAPKGDRLHPGLPGDQGPPGPDGPRGATGPP
GPPGSVDLLQGEPGDCGLPGPPGPPGLPGPPGYKGFPGCDGKDGQKGPMGFPGPQGPHGF
PGPPGEKGLPGPPGRKGPTGPPGSRGEPGPPADVEDCPRIPGLPGVPGPRGPEGAMGLPG
MRGPPGPGCKGEPGPNGRRGEDGVPGPPGPPGRKGDTGEAGCPGAPGPPGPTGDPGPKGF
GPGYLSGFLLVLHSQTDREPACPVGMPKLWTGYSLLYLEGQEKAHNQDLGLAGSCLPVFS
TLPFAYCNIHQVCHYAQRNDRSYWLASAAPLPMRPLSEEAIRPYVSRCAVCEAPAQAVAV
HSQDQSIPPCPPTWRSLWIGYSFLMHTGAGDQGGGQALMSPGSCLEDFRAAPFLECQGRQ
GTCHFFANEYSFWLTTVKPDLQFSSAPSPDTLKESQAQRQKISRCQVCVKYS
NT seq 5379 nt   +upstreamnt  +downstreamnt
atggctgcagagaaagaacctgtggccctaacttgggtccgtgaacaaggtggaggtcta
aggctcagggtgcttatgttcagtttctttcttgggaggaggaacaggggaggaagtggg
ctccctgttagggtggaaccagatgtgaagggtggggctgtgccttctgtccaactgggc
agtacagaagtagattttaacccaagacacagaacctcgcttgccaacgagaatcttcta
gaagagaagagaagagaagagaagattggcagaatttttttaaagtgccaagacttgcct
gtgaaatcgtctgcgtgcatagtattaatgaggtgctttttcagatggaccaagcccttg
gccacagatccctggttacttatatttattctcttttccgtgcaacatgtatatgggagt
gggaagaaatacattggtccttgtggaggaagagattgctttgtttgccagtgctttcct
gaaaaggggtctcggggtcaaccgggaccaccaggaccacaaggtccaattgggcccctg
ggaccccgaggacccactgggattccaggagagaaaggaatgagaggagacagtggccct
cttggggcagcagggtacaaaggagataagggtccaactggtgttcctggatttccaggt
ttggatggcctacctgggcacccagggcctccaggacccagaggcaaacctggcgtgaat
ggttacaatggctcaagaggtgacccagggtttccaggaggaagaggagctcctggccca
ggaggccccccaggctatcctggggaaaaaggagaaaaaggaaattcagtgttcatttta
ggtgccattaaaggtattcagggagacagaggagacccaggattgcctggcttaccggga
tctcggggtgcaagaggaccagcaggccccatgggatatcccggagagccaggcttagcg
ggacctctgggccaccctggacgtccaggcttgaagggcaatcctggtgtgggagtaaag
gggcaaatgggagatccgggtgaagttggccagcaaggttctcctggacccactctattg
gtagagcctcctgatttttgtctctataaaggagaaaagggtataaaaggaattcctgga
atgattggactgccaggaccaccaggacgcaagggagaacctggcattggagcaaaagga
gagaaaggtcttcctggattcccagggcctcggggtgagcctggttcccatggatctcca
ggttttccaggattaaagggagaaccaggactggttggaggccctgggctacttggattt
cttggtccaaagggagatcctggagaccgcgggcaaccaggaccaccaggtgttttggtg
actccagctcctttgctcaaaggacccttaggggacccagggttcccaggccactatgga
gaaacgggggccattggaccacctggtcccccaggtctcccgggcagaccaggggaagcc
tgtgcaggcatgatagggccccctgggccacaagggtttcctggtcatcctgggcttcca
gggtcagctggtattcctggaagacctgatactgctccaggaaaaccagggagtccagga
ccaccaggcatgcctggagcaccagggcttcagggactcccaggatcagatgtgatatac
tgtagtgctggacaccctggatcacaaggaataaaaggcaaagtgggtcctccaggagga
agaggctcaaaaggagaaaaaggaaatgaaggactgtgtgcctgcaagcctggtcccatg
ggcctccctggctccccaggacttcctgggaggcaggggactaagggagacttggggctc
cctggttggcttggagagaaaggtgacccgggccctcctggtgctgaaggatctccaggg
ctaccaggaaaaactggtgcctctggaccacctggcgacaaaggagcaaaaggtgacatg
gttgtatcaagagttaaaggacacaaaggagaaagaggtcctgatgggcccccaggattt
ccagggcagtcgggaacacatggtcgggatggatatcctggagaaaaaggggatccagga
ccccctggagatcatgaagacgcagccccaggtggtaaagggtttcctggacctccgggt
cccccaggcaaagtaggacctgtggggaccccaggactgggatttcctggtccaccggga
gagcgaggtcgaccaggagttccaggccgtccaggtgtgaggggtcctgatggcttgaag
ggtcagaaaggtgacacaatttcttgtaacgtaacctaccctgggaggccaggccctcca
ggtcttgatggacctccaggtccaaagggatttccaggtccttatggtgctcctgggcga
aggtgtttggatgggcaaaaaggacaacgtggcaaaccaggaatatcagaaatgcgaggt
ccacctggttttcgtggtgacatgggagatccaggttttggaggtgaaaaaggatcttcc
cttgttggacccccaggccctcctgggtcacctggaatgcatggtcagaaaggaattccg
ggagaccctgcatttggtcacccagggcctccaggaaagaggggtctttcaggactgcca
gggacaaaaggatccaaaggtgaaccaggatgccccggggctgaaggagcagatggcatt
cctggattcccaggccgtaaaggtcccaaaggcagagagggaagtgttgggtttccaggt
gtcccaggcccccctggccattcctgtgaaagaggcgctccagggatgccaggccaacca
ggactccccgggcctatgggtagtccaggtgccccaggtgggaagggacaaccaggagac
agggggcctccaggaccagttggaatgaagggtctccctggactcccgggactgcctggg
acacatggacccccaggctccccaggagtcccaggcccctttggcgatgatgggccacct
ggtcttccaggccccaaaggactgcaggggctgcctggtttccagggctttcctggagag
agaggaaagcctggcccagagggatatcctggcagaaagggagaacctggggaaaagggt
tgtcctggttttcctggagaccagggaatgagaggtggcaaaggggcaagaggaccctca
ggagatgaaggagaaatggctattgtttccaaaaaggggaaacctggggaacctggatct
cctggagatgatggattcccaggagaaagaggtgataaaggaagtccagggatacaaggg
agaagaggcgagccaggaagacatgggccacctggatttcacagaggggaacctggtaga
aaaggtcagccagggcctcctggatccccgggccttccaggctcacctgggctcagaggg
atcattggcttcccaggatttccaggcgaccagggtgagttgggttctccggggccccct
ggattctcaggaactgatggagcaaggggacctaaaggaaagaaaggtgaccctgccagt
cactttggtccacctggtccaaagggtgagccaggtagccctggatgtcaaggacatgtt
ggagcccctggagagcagggcttgcctggtgttcaagggccccatggaccacctggaagg
ccaggactgcctggctcctctggatcaccagggtgtccaggtgatcaggggatgcctggg
ctgaagggacacccaggagaaatgggaggccctgggccaagaggcctccagggagatcca
gggacaccaggccctccgggaatgaaaggtccttccgggttgcccggcctgaacggcctg
catggtttgaagggtcagaaaggaaccaaaggtgcttcaggtttgcacgatatgggtcca
cctggtccagtgggaatacctgggctaaaaggggagacaggagaccctggaagcccagga
atctctcctccaggtctttctggagaaaaaggtcccctgggacctccaggaagaccagga
ccacctggtcctgcaggttctacaggaagagctcctaagggtgacagacttcacccgggt
ctacctggagatcagggacctcctggccctgatggcccaagaggagcaactgggcctcca
ggcccccctgggagtgttgaccttctgcaaggggagccaggtgactgtggtcttccaggg
ccaccaggtcctccaggcctaccaggccctccagggtacaaaggcttcccaggctgtgat
ggaaaagatggccagaaaggaccaatgggattcccaggaccacaggggccacatggattt
cctgggccacctggagagaagggtttacctggacctccaggcagaaaagggcccactggc
cctccaggctccagaggtgaacctgggccacctgcagatgtggaagactgtcctcgaatc
ccggggcttcccggggtgccaggcccgagaggaccagaaggagccatggggctcccagga
atgagagggcccccaggaccaggttgcaaaggagagcctggcccgaatggcaggaggggt
gaggatggtgtccctgggcctcctgggcctcctggacgcaagggtgacacaggagaagct
ggctgccctggagcaccaggtcctcctggtcccactggggatcctgggcccaaagggttt
ggtcctggatacctcagtggcttcctcctggttctccacagtcagacagaccgggaacct
gcctgccccgtgggcatgcccaagctctggactggttacagtctgttatacctggaagga
caagagaaagcacacaaccaagaccttggtctggcagggtcttgccttcctgtgtttagc
acactgccctttgcctactgcaacatccaccaggtgtgccactatgctcagagaaacgac
aggtcctactggttggccagtgctgcacccctccccatgcggccactctcggaagaggcc
atccgcccatatgtcagccgctgtgctgtttgcgaggccccagcccaggcagtggcagtg
catagccaggaccagtccatcccgccatgcccgccaacctggaggagtctgtggatcggg
tactcgtttctgatgcacacaggagctggggaccaaggaggagggcaggccctcatgtca
cctggcagctgcctggaagatttcagagcagcaccattccttgaatgccaaggccggcag
ggaacctgccacttttttgcaaatgagtatagcttctggctaacaacagtgaaaccagac
ttgcagttttcttctgccccatcgccagacacattaaaagagagccaggcccagcgccag
aaaatcagcaggtgccaggtctgtgtaaaatatagctag

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