Carlito syrichta (Philippine tarsier): 103259283
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Entry
103259283 CDS
T07836
Name
(RefSeq) collagen alpha-4(IV) chain
KO
K06237
collagen type IV alpha
Organism
csyr
Carlito syrichta (Philippine tarsier)
Pathway
csyr04151
PI3K-Akt signaling pathway
csyr04382
Cornified envelope formation
csyr04510
Focal adhesion
csyr04512
ECM-receptor interaction
csyr04518
Integrin signaling
csyr04820
Cytoskeleton in muscle cells
csyr04926
Relaxin signaling pathway
csyr04933
AGE-RAGE signaling pathway in diabetic complications
csyr04974
Protein digestion and absorption
csyr05146
Amoebiasis
csyr05165
Human papillomavirus infection
csyr05200
Pathways in cancer
csyr05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
csyr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
103259283
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
103259283
04518 Integrin signaling
103259283
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
103259283
09142 Cell motility
04820 Cytoskeleton in muscle cells
103259283
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
103259283
09154 Digestive system
04974 Protein digestion and absorption
103259283
09158 Development and regeneration
04382 Cornified envelope formation
103259283
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
103259283
09162 Cancer: specific types
05222 Small cell lung cancer
103259283
09172 Infectious disease: viral
05165 Human papillomavirus infection
103259283
09174 Infectious disease: parasitic
05146 Amoebiasis
103259283
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
103259283
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csyr04147
]
103259283
00536 Glycosaminoglycan binding proteins [BR:
csyr00536
]
103259283
Exosome [BR:
csyr04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
103259283
Glycosaminoglycan binding proteins [BR:
csyr00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
103259283
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
103259283
NCBI-ProteinID:
XP_008055157
Ensembl:
ENSTSYG00000002382
UniProt:
A0A1U7TQ29
LinkDB
All DBs
Position
Unknown
AA seq
1792 aa
AA seq
DB search
MAAEKEPVALTWVREQGGGLRLRVLMFSFFLGRRNRGGSGLPVRVEPDVKGGAVPSVQLG
STEVDFNPRHRTSLANENLLEEKRREEKIGRIFLKCQDLPVKSSACIVLMRCFFRWTKPL
ATDPWLLIFILFSVQHVYGSGKKYIGPCGGRDCFVCQCFPEKGSRGQPGPPGPQGPIGPL
GPRGPTGIPGEKGMRGDSGPLGAAGYKGDKGPTGVPGFPGLDGLPGHPGPPGPRGKPGVN
GYNGSRGDPGFPGGRGAPGPGGPPGYPGEKGEKGNSVFILGAIKGIQGDRGDPGLPGLPG
SRGARGPAGPMGYPGEPGLAGPLGHPGRPGLKGNPGVGVKGQMGDPGEVGQQGSPGPTLL
VEPPDFCLYKGEKGIKGIPGMIGLPGPPGRKGEPGIGAKGEKGLPGFPGPRGEPGSHGSP
GFPGLKGEPGLVGGPGLLGFLGPKGDPGDRGQPGPPGVLVTPAPLLKGPLGDPGFPGHYG
ETGAIGPPGPPGLPGRPGEACAGMIGPPGPQGFPGHPGLPGSAGIPGRPDTAPGKPGSPG
PPGMPGAPGLQGLPGSDVIYCSAGHPGSQGIKGKVGPPGGRGSKGEKGNEGLCACKPGPM
GLPGSPGLPGRQGTKGDLGLPGWLGEKGDPGPPGAEGSPGLPGKTGASGPPGDKGAKGDM
VVSRVKGHKGERGPDGPPGFPGQSGTHGRDGYPGEKGDPGPPGDHEDAAPGGKGFPGPPG
PPGKVGPVGTPGLGFPGPPGERGRPGVPGRPGVRGPDGLKGQKGDTISCNVTYPGRPGPP
GLDGPPGPKGFPGPYGAPGRRCLDGQKGQRGKPGISEMRGPPGFRGDMGDPGFGGEKGSS
LVGPPGPPGSPGMHGQKGIPGDPAFGHPGPPGKRGLSGLPGTKGSKGEPGCPGAEGADGI
PGFPGRKGPKGREGSVGFPGVPGPPGHSCERGAPGMPGQPGLPGPMGSPGAPGGKGQPGD
RGPPGPVGMKGLPGLPGLPGTHGPPGSPGVPGPFGDDGPPGLPGPKGLQGLPGFQGFPGE
RGKPGPEGYPGRKGEPGEKGCPGFPGDQGMRGGKGARGPSGDEGEMAIVSKKGKPGEPGS
PGDDGFPGERGDKGSPGIQGRRGEPGRHGPPGFHRGEPGRKGQPGPPGSPGLPGSPGLRG
IIGFPGFPGDQGELGSPGPPGFSGTDGARGPKGKKGDPASHFGPPGPKGEPGSPGCQGHV
GAPGEQGLPGVQGPHGPPGRPGLPGSSGSPGCPGDQGMPGLKGHPGEMGGPGPRGLQGDP
GTPGPPGMKGPSGLPGLNGLHGLKGQKGTKGASGLHDMGPPGPVGIPGLKGETGDPGSPG
ISPPGLSGEKGPLGPPGRPGPPGPAGSTGRAPKGDRLHPGLPGDQGPPGPDGPRGATGPP
GPPGSVDLLQGEPGDCGLPGPPGPPGLPGPPGYKGFPGCDGKDGQKGPMGFPGPQGPHGF
PGPPGEKGLPGPPGRKGPTGPPGSRGEPGPPADVEDCPRIPGLPGVPGPRGPEGAMGLPG
MRGPPGPGCKGEPGPNGRRGEDGVPGPPGPPGRKGDTGEAGCPGAPGPPGPTGDPGPKGF
GPGYLSGFLLVLHSQTDREPACPVGMPKLWTGYSLLYLEGQEKAHNQDLGLAGSCLPVFS
TLPFAYCNIHQVCHYAQRNDRSYWLASAAPLPMRPLSEEAIRPYVSRCAVCEAPAQAVAV
HSQDQSIPPCPPTWRSLWIGYSFLMHTGAGDQGGGQALMSPGSCLEDFRAAPFLECQGRQ
GTCHFFANEYSFWLTTVKPDLQFSSAPSPDTLKESQAQRQKISRCQVCVKYS
NT seq
5379 nt
NT seq
+upstream
nt +downstream
nt
atggctgcagagaaagaacctgtggccctaacttgggtccgtgaacaaggtggaggtcta
aggctcagggtgcttatgttcagtttctttcttgggaggaggaacaggggaggaagtggg
ctccctgttagggtggaaccagatgtgaagggtggggctgtgccttctgtccaactgggc
agtacagaagtagattttaacccaagacacagaacctcgcttgccaacgagaatcttcta
gaagagaagagaagagaagagaagattggcagaatttttttaaagtgccaagacttgcct
gtgaaatcgtctgcgtgcatagtattaatgaggtgctttttcagatggaccaagcccttg
gccacagatccctggttacttatatttattctcttttccgtgcaacatgtatatgggagt
gggaagaaatacattggtccttgtggaggaagagattgctttgtttgccagtgctttcct
gaaaaggggtctcggggtcaaccgggaccaccaggaccacaaggtccaattgggcccctg
ggaccccgaggacccactgggattccaggagagaaaggaatgagaggagacagtggccct
cttggggcagcagggtacaaaggagataagggtccaactggtgttcctggatttccaggt
ttggatggcctacctgggcacccagggcctccaggacccagaggcaaacctggcgtgaat
ggttacaatggctcaagaggtgacccagggtttccaggaggaagaggagctcctggccca
ggaggccccccaggctatcctggggaaaaaggagaaaaaggaaattcagtgttcatttta
ggtgccattaaaggtattcagggagacagaggagacccaggattgcctggcttaccggga
tctcggggtgcaagaggaccagcaggccccatgggatatcccggagagccaggcttagcg
ggacctctgggccaccctggacgtccaggcttgaagggcaatcctggtgtgggagtaaag
gggcaaatgggagatccgggtgaagttggccagcaaggttctcctggacccactctattg
gtagagcctcctgatttttgtctctataaaggagaaaagggtataaaaggaattcctgga
atgattggactgccaggaccaccaggacgcaagggagaacctggcattggagcaaaagga
gagaaaggtcttcctggattcccagggcctcggggtgagcctggttcccatggatctcca
ggttttccaggattaaagggagaaccaggactggttggaggccctgggctacttggattt
cttggtccaaagggagatcctggagaccgcgggcaaccaggaccaccaggtgttttggtg
actccagctcctttgctcaaaggacccttaggggacccagggttcccaggccactatgga
gaaacgggggccattggaccacctggtcccccaggtctcccgggcagaccaggggaagcc
tgtgcaggcatgatagggccccctgggccacaagggtttcctggtcatcctgggcttcca
gggtcagctggtattcctggaagacctgatactgctccaggaaaaccagggagtccagga
ccaccaggcatgcctggagcaccagggcttcagggactcccaggatcagatgtgatatac
tgtagtgctggacaccctggatcacaaggaataaaaggcaaagtgggtcctccaggagga
agaggctcaaaaggagaaaaaggaaatgaaggactgtgtgcctgcaagcctggtcccatg
ggcctccctggctccccaggacttcctgggaggcaggggactaagggagacttggggctc
cctggttggcttggagagaaaggtgacccgggccctcctggtgctgaaggatctccaggg
ctaccaggaaaaactggtgcctctggaccacctggcgacaaaggagcaaaaggtgacatg
gttgtatcaagagttaaaggacacaaaggagaaagaggtcctgatgggcccccaggattt
ccagggcagtcgggaacacatggtcgggatggatatcctggagaaaaaggggatccagga
ccccctggagatcatgaagacgcagccccaggtggtaaagggtttcctggacctccgggt
cccccaggcaaagtaggacctgtggggaccccaggactgggatttcctggtccaccggga
gagcgaggtcgaccaggagttccaggccgtccaggtgtgaggggtcctgatggcttgaag
ggtcagaaaggtgacacaatttcttgtaacgtaacctaccctgggaggccaggccctcca
ggtcttgatggacctccaggtccaaagggatttccaggtccttatggtgctcctgggcga
aggtgtttggatgggcaaaaaggacaacgtggcaaaccaggaatatcagaaatgcgaggt
ccacctggttttcgtggtgacatgggagatccaggttttggaggtgaaaaaggatcttcc
cttgttggacccccaggccctcctgggtcacctggaatgcatggtcagaaaggaattccg
ggagaccctgcatttggtcacccagggcctccaggaaagaggggtctttcaggactgcca
gggacaaaaggatccaaaggtgaaccaggatgccccggggctgaaggagcagatggcatt
cctggattcccaggccgtaaaggtcccaaaggcagagagggaagtgttgggtttccaggt
gtcccaggcccccctggccattcctgtgaaagaggcgctccagggatgccaggccaacca
ggactccccgggcctatgggtagtccaggtgccccaggtgggaagggacaaccaggagac
agggggcctccaggaccagttggaatgaagggtctccctggactcccgggactgcctggg
acacatggacccccaggctccccaggagtcccaggcccctttggcgatgatgggccacct
ggtcttccaggccccaaaggactgcaggggctgcctggtttccagggctttcctggagag
agaggaaagcctggcccagagggatatcctggcagaaagggagaacctggggaaaagggt
tgtcctggttttcctggagaccagggaatgagaggtggcaaaggggcaagaggaccctca
ggagatgaaggagaaatggctattgtttccaaaaaggggaaacctggggaacctggatct
cctggagatgatggattcccaggagaaagaggtgataaaggaagtccagggatacaaggg
agaagaggcgagccaggaagacatgggccacctggatttcacagaggggaacctggtaga
aaaggtcagccagggcctcctggatccccgggccttccaggctcacctgggctcagaggg
atcattggcttcccaggatttccaggcgaccagggtgagttgggttctccggggccccct
ggattctcaggaactgatggagcaaggggacctaaaggaaagaaaggtgaccctgccagt
cactttggtccacctggtccaaagggtgagccaggtagccctggatgtcaaggacatgtt
ggagcccctggagagcagggcttgcctggtgttcaagggccccatggaccacctggaagg
ccaggactgcctggctcctctggatcaccagggtgtccaggtgatcaggggatgcctggg
ctgaagggacacccaggagaaatgggaggccctgggccaagaggcctccagggagatcca
gggacaccaggccctccgggaatgaaaggtccttccgggttgcccggcctgaacggcctg
catggtttgaagggtcagaaaggaaccaaaggtgcttcaggtttgcacgatatgggtcca
cctggtccagtgggaatacctgggctaaaaggggagacaggagaccctggaagcccagga
atctctcctccaggtctttctggagaaaaaggtcccctgggacctccaggaagaccagga
ccacctggtcctgcaggttctacaggaagagctcctaagggtgacagacttcacccgggt
ctacctggagatcagggacctcctggccctgatggcccaagaggagcaactgggcctcca
ggcccccctgggagtgttgaccttctgcaaggggagccaggtgactgtggtcttccaggg
ccaccaggtcctccaggcctaccaggccctccagggtacaaaggcttcccaggctgtgat
ggaaaagatggccagaaaggaccaatgggattcccaggaccacaggggccacatggattt
cctgggccacctggagagaagggtttacctggacctccaggcagaaaagggcccactggc
cctccaggctccagaggtgaacctgggccacctgcagatgtggaagactgtcctcgaatc
ccggggcttcccggggtgccaggcccgagaggaccagaaggagccatggggctcccagga
atgagagggcccccaggaccaggttgcaaaggagagcctggcccgaatggcaggaggggt
gaggatggtgtccctgggcctcctgggcctcctggacgcaagggtgacacaggagaagct
ggctgccctggagcaccaggtcctcctggtcccactggggatcctgggcccaaagggttt
ggtcctggatacctcagtggcttcctcctggttctccacagtcagacagaccgggaacct
gcctgccccgtgggcatgcccaagctctggactggttacagtctgttatacctggaagga
caagagaaagcacacaaccaagaccttggtctggcagggtcttgccttcctgtgtttagc
acactgccctttgcctactgcaacatccaccaggtgtgccactatgctcagagaaacgac
aggtcctactggttggccagtgctgcacccctccccatgcggccactctcggaagaggcc
atccgcccatatgtcagccgctgtgctgtttgcgaggccccagcccaggcagtggcagtg
catagccaggaccagtccatcccgccatgcccgccaacctggaggagtctgtggatcggg
tactcgtttctgatgcacacaggagctggggaccaaggaggagggcaggccctcatgtca
cctggcagctgcctggaagatttcagagcagcaccattccttgaatgccaaggccggcag
ggaacctgccacttttttgcaaatgagtatagcttctggctaacaacagtgaaaccagac
ttgcagttttcttctgccccatcgccagacacattaaaagagagccaggcccagcgccag
aaaatcagcaggtgccaggtctgtgtaaaatatagctag
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integrated database retrieval system