Carlito syrichta (Philippine tarsier): 103260001
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Entry
103260001 CDS
T07836
Symbol
PCDHB1
Name
(RefSeq) protocadherin beta-1
KO
K16494
protocadherin beta
Organism
csyr
Carlito syrichta (Philippine tarsier)
Brite
KEGG Orthology (KO) [BR:
csyr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
csyr04515
]
103260001 (PCDHB1)
Cell adhesion molecules [BR:
csyr04515
]
Cadherins
Protocadherins
103260001 (PCDHB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Ig_VWA7
Ly49
PLAC8
Motif
Other DBs
NCBI-GeneID:
103260001
NCBI-ProteinID:
XP_008055834
UniProt:
A0A1U7T712
LinkDB
All DBs
Position
Unknown
AA seq
818 aa
AA seq
DB search
MAVARRKPLQSRQVESLLIFLCVSVGGATTIRYSVAEEMESGSFVANVAKDLGLEVGKLA
ARGARLVSEGNKLHFRLHRKTGDLFVKEKLDRESLCGKADPCVLHFEIVLVEPLQSFRVE
VRVFDINDNAPVFLNKEPLLKIPESTPLGSRFPLQSAQDLDVGLNGLQNYTLSANGYFHL
HTRFRSNGPKYAELVLDKPLDREKQPAVNLTITAVDGGSPPKSASAHIRVVVLDVNDHVP
QFSRLMYRAQVPENSANGSLVVMVTAMDLDEGTNKEITYSLAQNPETILQTFQIGSQTGE
VRLRGPLDFEAIETYDIDIQATDGGGLSAHSKVLVEVVDVNDNPPEVMVSSVSSPLPEDS
PLQTVVALFTIRDRDIRVGGKITCFLKEDFPFVVRPTFRNSYSLVTNRGLDREEVSGYNI
TLVAMDTGPPSLSTETVIEVLISDINDNPPVFQKDSYILTVRENNSPAVFIGKVHAEDLD
LGENAQITYSLLPPKSGDLSVFAYISINSDNGKLYALRTMDYEAIQDFQFVVKATDGGFL
SLSSQVSVRVVVLDDNDNRPMILYPLQNGTLSCNDLVPRSAEAGYLVTKVVAVDGDSGQN
SWLSYHLLKATDLGLFSVQRQNGEIHTLRQISERDHMMQKLIILVQDHGQPALSTTASLS
ILLVDGFSEPYLQFRDPSKHFRKVNPSTKYLVISLTVLSFLFLLSVTVIFVIHIYQKIKY
REKFTIQEHFYDDCNFPSNLVQGGGNESLSQPYPYEMCSTTGTGNSEFRFLKRFMPNFPF
PHATGEVKTEAGSSLPSDSDKNKSRRSEGRAQVSDDYM
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atggcggttgcgcgcagaaaacctttgcaaagcaggcaagtggaatctcttctcattttt
ctgtgcgtatccgtagggggtgcgacaaccatccgctattcggtggcggaggaaatggag
agtggctcgtttgtggccaatgtggctaaggacctaggcttggaggttgggaagctggct
gcgcgcggggcgcggcttgtttccgagggcaacaaactccatttccggctccaccgcaag
acgggagatttgttcgtgaaggagaaactggatcgggagtccctctgtggcaaagccgac
ccgtgcgtgctgcactttgaaatagtcctggtggaaccgctgcagtccttccgagtcgaa
gtcagggtatttgatatcaatgacaatgccccagtttttctaaacaaggagcctctttta
aagattccggagagcactcccttgggttcacgttttcctctgcagagcgcccaggatctg
gacgtgggcctcaacggactccaaaactacaccttgagcgccaatgggtatttccacttg
cacactcgctttcgcagcaacgggccgaaatatgccgagctcgtgctggataaaccccta
gacagagagaagcagcctgcagtcaacttgacaattacggcggtagacggcggatccccg
cccaagtctgctagtgcccacatccgtgtggtggttttggatgtcaacgaccacgtgccc
cagttctccagactgatgtaccgtgctcaggtcccggaaaatagcgccaatggctctttg
gtggtcatggtgactgccatggacctagatgagggcaccaacaaggagatcacttactcc
ttagctcaaaacccagaaacaattctacagacgtttcagattggctctcaaactggagag
gttcggctaagagggcccctagattttgaagctattgaaacatacgacattgacattcaa
gctaccgatggaggaggcctctctgcccacagcaaagtcctggtggaagtggtggatgtt
aatgacaatcctcctgaagtgatggtctcctctgtgtccagccctctccctgaggactca
ccactacagactgtggtggctcttttcactatccgggaccgggacattcgagtgggagga
aaaatcacctgcttcctcaaagaagactttccctttgtagtcagacctacattccggaat
tcttactcattggtcactaacagaggcttggatcgggaggaggtctcaggctataatatc
accctcgttgccatggatactggaccacccagcttgtccacagagactgtgattgaggtg
ctaatatctgacattaatgacaatcccccagtatttcagaaagattcctacatcttgact
gttcgagaaaacaatagtcctgcagtttttattggcaaagtccatgctgaggatttagat
ttgggtgagaatgcccaaataacatattctctgctgcctccaaagagtggagatctatca
gtctttgcttatatttccataaattcagacaatgggaaactgtatgcactgagaaccatg
gattatgaagccattcaagattttcaatttgtggttaaggcaacagatgggggcttcttg
tcactgagtagccaagtcagtgtcagagtggttgtcctggatgacaatgacaatcgtcca
atgatcttgtaccccctgcagaatggcaccttatcctgcaatgacctggtgcccaggtct
gcagaggcaggctatctggtgaccaaagtggtagctgtggatggtgactcaggtcagaat
tcttggctttcatatcatctacttaaggccactgaccttgggttattttctgttcaaaga
caaaatggggaaatccatacattacggcagatatctgagagagaccatatgatgcagaaa
ttgatcattcttgttcaggatcatggccaaccagcactctccactactgcctcactcagt
atcttgctggtagatggcttttcagagccctacttgcaattccgggatccatccaaacat
tttagaaaggtaaatccatccactaaatatttggtcatttctctgacggtgctttccttt
ctctttctcctttctgttacagtgatcttcgttatccacatctaccaaaagattaaatat
agagagaagttcacaattcaagagcatttctatgatgactgtaatttccctagcaactta
gtacaaggaggaggcaatgaatccttatcccagccttatccgtatgaaatgtgttcaacc
actggcactggtaatagtgagttccggtttcttaaacgctttatgcccaactttcctttt
ccccatgccactggagaggtaaaaacagaggctggctcgagtttgccttcagattctgat
aagaataagtctcggaggtcagagggccgtgctcaggtatctgatgactatatgtag
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