Carlito syrichta (Philippine tarsier): 103261004
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Entry
103261004 CDS
T07836
Symbol
TOPBP1
Name
(RefSeq) DNA topoisomerase 2-binding protein 1
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
csyr
Carlito syrichta (Philippine tarsier)
Pathway
csyr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
csyr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
103261004 (TOPBP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
csyr03032
]
103261004 (TOPBP1)
03400 DNA repair and recombination proteins [BR:
csyr03400
]
103261004 (TOPBP1)
DNA replication proteins [BR:
csyr03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
103261004 (TOPBP1)
DNA repair and recombination proteins [BR:
csyr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
103261004 (TOPBP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BRCT
PTCB-BRCT
TopBP1_BRCT0
BRCT_2
RTT107_BRCT_5
LIG3_BRCT
BRCT_TopB1_SLF1
ECT2_BRCT0
RAP1
Motif
Other DBs
NCBI-GeneID:
103261004
NCBI-ProteinID:
XP_008056831
Ensembl:
ENSTSYG00000004294
UniProt:
A0A1U7TT09
LinkDB
All DBs
Position
Unknown
AA seq
1516 aa
AA seq
DB search
MSRNGKEPFFVKFLKSSDNSECFFKALESIKEFQSEEYLQIITQKEALEIRENDRSLYIC
DPFDGIVFDHLKKLGCRIVGPQVVIFCMQHQRCVPRAEHPVYNMVMSDITISCTSLEKEK
REEVHKYVQMMGGRVYRDLNVSVTHLIAGEVGSKKYLVAANLKKPILLPSWIKTLWEKSQ
EKKIAKYTDINMEDFKCPIFLGCIISVTGLCGSDRKAVQQLTVKHGGQYMGQLKMNECTH
LIVQEPKGQKYECAKRWNVHCVTTQWFFDSVEKGFCQDESMYKTEPRPEAKTMPDTSTPT
GQINPIDNRTLSDVSHISNINASCIDESICNSVNSKLEPTLENLENLDVSAFQAPEDLLD
GCRIYLCGFSGRKLDKLRRLINNGGGVRFNQLNEDVTHVIVGDYDDELKQFWNKSAHRPH
VVGAKWLLECFSKGYMLAEEPYIHANYQPAEIPVSDQPESKATVLKKKNGSFSKKDFSPS
EKHEQADEDLLSQYVNNNSTVVEAEKSEVAPFGDSTHITLQEENQSSVSHCLPDVSTVTE
EGLFSRKSFLILGFSNENECNIASIIKENAGKITSPPSRTVADYAVVPLLGCKVEATVGE
VVTNTWLVTCIDCQTLIDPKSNPLFTPVPVMTGMTPLADCVISFSQCAGAEKDSLIFLAN
RLGASVQEYFVRKSNAKKGMLASTHLILKEPGGSKYEAAKKWNLPAVTIAWLLETARMGK
RADENHFLIEDLPKQEQSLETEITNEMTLNTNASEHPGTHQGIHRKPAVTPLDMKRFQSK
AFHAVISQHARQTSASPAVGQPLQKEPSLHLDTPSKFLSKDKLFKPSFDVKDALAALETP
GSSSQQKRKLSTPLSEVIVRNLKLALANSSRNAVALSASPQLKDAQSKKEETPKPLHKVV
VYVSKKLSKKQSELNGIAASLGADYRWSFDETVTHFIYQGRPNDTNREYKSVKERGLHIV
SEHWLLDCAQEYKHLPESLYPHTYNPKMSLDISAVQDGRPCNSRQLSVVSTTKDAEADQL
PLEENDVNNMTTSNKESASSNGNGRSDFKGALTQTLEMRENFQKQLKEIMSATSIVKPQA
QRNSLSRSGCNSASSTPDSTRSARSGRSRVLEALRQSRQTVPDVNTEPSQNEQIIWDDPT
AREERARLANNLQWPTCPTQYSEVPADIKDLEDSPFQAPLCDSETAKQAVCGAESICVTE
APERPVPEELETSTKDSCLIPTPQAPSIAFPLANPPVAPHPREKVIMIEETREEFKKQYI
FQLSSLNPQERIDYCHLIEKLGGLVIEKQSFDPNCTHIVVGHPLRNEKYLASVAAGKWVL
HRSYLEACRTAGRFVQEEDYEWGSSSILDVLTGINVQQRRLALAAMRWRKKIQQRQESGI
VEGAFSGWKVILHVEQSREAGFKRLLQSGGAKVLPGHSVSLFKEATHLFFDFNKLKPEDS
GVNIAEAAAQNVYCLKTEYIADYLMQESPPCVENYCLPEAVSFLQNNKEPGPGLSQKRKA
PAVQHNLKRPRVVSPL
NT seq
4551 nt
NT seq
+upstream
nt +downstream
nt
atgtccagaaatggcaaagaaccgttttttgtgaagtttttaaagtcttcagacaattct
gaatgtttttttaaagctcttgagtcaataaaagaattccaatcagaagaatatcttcag
attattacacaaaaagaggcattggagataagggagaatgatagatcactgtatatttgt
gacccttttgatggcattgtgtttgatcacctcaaaaagcttggctgcagaattgttggc
cctcaagtagtcatattttgtatgcagcaccagcgatgtgtcccaagagctgaacatcct
gtttataatatggttatgtctgatataaccatatcttgtacaagtctggaaaaagaaaaa
agggaagaagttcataaatatgtacagatgatgggcggacgagtatacagagaccttaat
gtatcagtaactcatcttattgcaggagaagttggtagtaaaaaatatttagttgctgca
aatctcaagaaacctattttgcttccctcttggataaaaacactttgggagaagtcacaa
gagaagaaaatagctaaatatactgatataaacatggaagacttcaagtgtcctattttt
cttggttgcataatcagtgtgactggtttgtgtggctcagacaggaaggcagttcaacaa
ctcacagttaagcatggaggtcaatacatgggacagttgaaaatgaatgaatgtacacat
ctcattgtgcaagaaccaaaaggtcagaaatatgaatgtgccaagagatggaatgtacac
tgtgtgaccacacaatggttttttgacagtgttgagaaaggtttttgtcaggatgaatcc
atgtataagacagaacctagaccagaagcaaagactatgcctgatacttcaactcctact
ggccagatcaatccaattgataatcgtactctttcagatgtcagccatatttccaacata
aatgcaagttgtatagatgaatcaatatgtaattcagttaacagcaaattggagcctaca
cttgaaaatcttgaaaatctggatgtcagtgcatttcaagcacctgaagatttactagat
ggttgtcggatatatctttgtggttttagtggcagaaagttagataaactgagaaggctt
attaacaatggaggaggagttcgttttaatcagcttaatgaagatgtaactcatgtcatc
gtgggagattatgatgatgaattgaagcagttttggaataaatcagcccacaggcctcat
gtagtgggagcaaagtggttgctagaatgtttcagtaaaggttatatgcttgctgaagaa
ccatatatccatgctaattatcagccagcggaaattccagtttcagatcagcctgaaagt
aaagcaactgtattaaaaaagaagaacggtagcttctctaagaaagacttctctcccagt
gaaaagcacgagcaagctgatgaagatctgctctctcaatatgtgaataataattccaca
gtagttgaagctgagaagtctgaagttgcgccctttggtgattctactcacattactttg
caagaagaaaaccagtcttctgtcagtcattgccttcctgacgtttctacagttactgaa
gaaggcttatttagccgaaagagtttcctcattttgggatttagtaatgaaaatgaatgt
aatattgcaagcatcataaaagaaaatgctggaaaaatcacatcccctccaagcaggact
gttgctgattatgctgtggttccgctgctggggtgtaaagtggaagcaactgtgggagaa
gtcgttacaaatacgtggctggttacttgtatagactgtcagactttaattgatccaaag
tcaaatcctctcttcacaccagttccagtaatgacaggaatgactcctttagcagattgt
gttatttcattcagccagtgtgctggagcagaaaaagattctttgatattcctagcaaat
cgccttggagcaagtgttcaggaatattttgttcgcaagtccaatgcaaagaagggcatg
cttgccagtacacatcttatattgaaagagccaggtggctctaaatatgaagctgcaaag
aagtggaatttaccggcagtgacgatagcgtggctgttggagactgctaggatgggaaag
agagcagatgaaaaccattttctcattgaagatttgcctaaacaagaacaaagtttggaa
actgaaataacaaatgagatgactctaaatacaaatgcctcagagcaccctggcacacac
cagggaattcacagaaaaccagctgttacacctttagatatgaagcgctttcagagtaag
gctttccatgctgtgatctcacagcatgccaggcagacttcagcctcgccagcggtagga
caaccacttcagaaggaaccctcattacacctggatacaccatcaaaatttctgtccaag
gacaaactcttcaagccttcctttgatgtgaaggatgcacttgctgccttggagacacca
ggaagttccagtcaacagaaaaggaaactgagcacaccactttcggaagttattgtcaga
aacttgaaacttgctctagcaaatagctctcgaaatgctgttgctctttctgccagccct
cagctgaaggatgcccagtcaaagaaggaagaaactccaaagccacttcacaaggtggtg
gtctatgtgagtaaaaaactcagtaagaagcagagtgaactgaatgggattgcagcctct
ctaggggccgattacaggtggagttttgatgaaacagtgactcatttcatctatcagggt
cgaccaaatgacactaatcgagagtacaaatctgtaaaagaaagaggattgcacattgtt
tcagaacattggcttttagattgtgctcaagagtataagcatcttcctgaatctctttat
ccacatacttataatcccaaaatgagcttggatatcagtgcagtgcaagatggtagaccc
tgtaacagccgacaactctcagttgtctctacaacaaaggatgctgaggcagatcagttg
cctttagaagaaaatgatgtaaacaatatgaccaccagtaataaagaatcagcatcatca
aatggaaatggaaggagtgactttaaaggagctctgactcaaaccctggagatgagagaa
aactttcagaagcagttaaaggagataatgtctgcgacatcaatagtaaaaccccaagcg
cagaggaattccctttccagaagtggctgtaacagtgcgtcttctactcctgacagcacg
cgctctgctcgcagcgggcgaagtcgcgtcctagaggcactgagacagtctcgtcaaaca
gtacctgatgtcaacacagagccctcccaaaatgaacagatcatttgggatgatcctaca
gcaagggaggagagagcaaggcttgccaacaatttgcagtggcctacgtgtcccacacaa
tactctgaggttccagctgacattaaagacttggaggattctccttttcaagcacctttg
tgtgattcagaaactgctaaacaggctgtctgtggtgctgaaagcatatgtgtgaccgaa
gcccctgaacgcccagtgcctgaagaactggaaacttcaacaaaagacagctgcctgatc
ccgacacctcaagcccctagtattgctttccccctcgccaacccaccagtggctccacac
ccgcgcgagaaggttataatgatagaggagactcgtgaagaatttaaaaaacagtacata
tttcagttatcatctctgaatcctcaagaacgtattgattattgtcatctgattgaaaaa
ctaggtggattagtgatagaaaagcagagctttgaccccaactgcacacacattgttgtg
ggacatccacttcgaaatgagaagtatttagcctcggtggcagctgggaagtgggtgctc
catcgttcctacctggaagcttgcagaactgctggacgcttcgtgcaggaagaagactat
gagtggggaagtagttccatactcgacgttttgactggaatcaacgtccagcaacgaaga
ctagcgcttgcagcaatgagatggaggaaaaaaatccagcaaagacaagaatcaggcatt
gttgagggggcgtttagcgggtggaaggttattttacatgttgaacagtctcgagaagca
gggttcaaacgccttcttcagtcaggaggagcaaaggtgctccctggtcattctgtatct
ttatttaaagaggccacacatcttttttttgacttcaataaactgaagccagaagactca
ggagttaatatagcagaagctgctgcccagaacgtatactgcttgaagacagaatacatt
gctgattatctcatgcaggagtctcctccttgtgtagaaaattactgtctaccagaagct
gtttcattccttcagaataataaggaacctgggcctggattatcacagaagagaaaagcg
cctgcagtacaacataacctcaagcgacctagagtggtgtctcccctttag
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integrated database retrieval system
