KEGG   Carlito syrichta (Philippine tarsier): 103261292
Entry
103261292         CDS       T07836                                 
Symbol
SEH1L
Name
(RefSeq) nucleoporin SEH1 isoform X1
  KO
K14299  nucleoporin SEH1
Organism
csyr  Carlito syrichta (Philippine tarsier)
Pathway
csyr03013  Nucleocytoplasmic transport
csyr04150  mTOR signaling pathway
csyr05014  Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:csyr00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    103261292 (SEH1L)
 09130 Environmental Information Processing
  09132 Signal transduction
   04150 mTOR signaling pathway
    103261292 (SEH1L)
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    103261292 (SEH1L)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:csyr03019]
    103261292 (SEH1L)
   04131 Membrane trafficking [BR:csyr04131]
    103261292 (SEH1L)
Messenger RNA biogenesis [BR:csyr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     103261292 (SEH1L)
Membrane trafficking [BR:csyr04131]
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    103261292 (SEH1L)
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 WD40 WD40_Prp19 Beta-prop_WDR3_1st Beta-prop_EML_2 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 Beta-prop_WDR3_2nd WDR90_beta-prop_4th Beta-prop_RIG_2nd WD40_MABP1-WDR62_2nd ANAPC4_WD40 Beta-prop_EIPR1 WDR55 Beta-prop_TEP1_2nd EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_WDR35_TULP_N Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR75_1st Beta-prop_WDR19_1st Beta-prop_TEP1_C Beta-prop_IFT140_1st Beta-prop_IFT122_1st
Other DBs
NCBI-GeneID: 103261292
NCBI-ProteinID: XP_008057116
Ensembl: ENSTSYG00000007580
UniProt: A0A1U7TTX2
LinkDB
Position
Unknown
AA seq 422 aa
MFVARSIAADHKDLIHDVSFDFHGRRMATCSSDQSVKVWDKSESGDWHCTASWKTHSGSV
WRVTWAHPEFGQVLASCSFDRTAAVWEEIVGESNDKLRGQSHWVKRTTLVDSRTSVTDVK
FAPKHMGLMLATCSADGIVRIYEAPDVMNLSQWSLQHEISCKLSCSCISWNPSSSRAHSP
MIAVGSDDSSPNAMAKVQIFEYNENTRKYAKAETLMTVTDPVHDIAFAPNLGRSFHILAI
ATKDVRIFTLKPVRKELTSSGGPTKFEIHIVAQFDNHNSQVWRVSWNITGTVLASSGDDG
CVRLWKANYMDNWKCTGILKGNGSPVNGSSQQGNANPSLGSNIPNLQNSLNGSSAGRYFF
PPLDSPQAGSRWSSYAQLLPPPPPPPLVEHSCDADTASLQYPHPRRRYLSRPLNPLPENE
GV
NT seq 1269 nt   +upstreamnt  +downstreamnt
atgttcgtggcgcgcagcatcgcagcggaccacaaggacctcatccacgatgtctctttc
gacttccacgggcggcggatggcgacctgctccagcgaccagagcgtcaaggtctgggat
aaaagtgaaagtggggattggcattgtactgctagctggaagacacacagtggctctgta
tggcgtgtgacatgggcccatcctgaatttggacaggttttggcttcctgttcttttgac
cgaacagctgctgtatgggaagaaatagtaggagaatcaaatgataaattacgaggacag
agtcactgggttaaaaggacaactctagtggatagcagaacatctgttaccgatgtgaaa
tttgctcccaagcatatgggtcttatgttagcaacctgttcagcagatggtatagtaaga
atatacgaggcaccagatgttatgaatctcagccagtggtccctgcagcatgagatctca
tgcaagctaagctgtagttgtatttcttggaacccttcaagctctcgtgctcattccccc
atgatagctgttggaagtgatgacagtagtcctaatgcgatggccaaggttcagattttt
gaatataatgaaaacaccaggaaatatgcaaaagctgaaactctcatgacagtcactgat
cctgtacatgatattgcgtttgctccaaacctgggaagatcgtttcatattctagcgata
gcaaccaaagatgtgagaatttttacactaaagcctgtgagaaaagaactaacttcttct
ggtggacccacaaaatttgaaatccatatagtggctcagtttgataatcataattctcag
gtctggcgcgtcagttggaatataacaggaacggtgctagcatcttcaggagatgatggc
tgtgtaagattgtggaaagctaattatatggacaattggaagtgtactggtattttgaaa
ggtaacgggagcccagtcaatgggagttctcagcagggaaatgcaaatccttccctaggt
tcaaatattccaaatcttcaaaattcattaaatggatcctctgctggcaggtatttcttt
ccccctctggattccccacaggctggatcaagatggtccagttatgcccagctccttcct
cctcctcctcctcctcctctggtagagcactcttgcgatgctgacactgccagcctccag
tatcctcaccctcgcagacgatatctctctcggcctcttaatcccttacctgagaatgaa
ggggtttaa

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