Carlito syrichta (Philippine tarsier): 103261936
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Entry
103261936 CDS
T07836
Symbol
BLM
Name
(RefSeq) Bloom syndrome protein isoform X1
KO
K10901
bloom syndrome protein [EC:
5.6.2.4
]
Organism
csyr
Carlito syrichta (Philippine tarsier)
Pathway
csyr03440
Homologous recombination
csyr03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
csyr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
103261936 (BLM)
03460 Fanconi anemia pathway
103261936 (BLM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
csyr03032
]
103261936 (BLM)
03400 DNA repair and recombination proteins [BR:
csyr03400
]
103261936 (BLM)
Enzymes [BR:
csyr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
103261936 (BLM)
DNA replication proteins [BR:
csyr03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
103261936 (BLM)
DNA repair and recombination proteins [BR:
csyr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecQ family DNA helicases
103261936 (BLM)
Bloom's syndrome complex (BTR)
103261936 (BLM)
FA (Fanconi anemia) pathway
103261936 (BLM)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BLM_N
BDHCT_assoc
DEAD
BDHCT
RecQ_Zn_bind
Helicase_C
RQC
HRDC
Med21
Motif
Other DBs
NCBI-GeneID:
103261936
NCBI-ProteinID:
XP_008057707
Ensembl:
ENSTSYG00000012368
UniProt:
A0A1U7TXA0
LinkDB
All DBs
Position
Unknown
AA seq
1413 aa
AA seq
DB search
MAAVPQNNLQEQLERHSARRLNNKLSLSKPKSSGFTFKKKTSSESDVSLTSVSVAKMPVL
SNKDVNVTEDFSFSEPLSHIKNQSTRISDVFKNAPEGQQTQRLASKPSLQIPKEVLCTTQ
NTPVIKKSRDAAFKTLEFSSSSDSFNAIDDWDDMDDFDTTGTSKAFVTPSRNHFVRVSTA
QKSKKAKRNFLKAQLYKTNTVNIDLTSSSESKQVDLTKEQKDDSEWLSSDVICIDDGPVF
KVPTSEDTQKSHSLETHLGDERDNSEKKNNLEEAELHSTEKVPCIEFDDDDYNIDFVPPS
PEEEINSTTSSSLKCFSMLKDLDTSEEKKDVLSTSEDLLSAPENVPTQKPHPEASTDCDA
GQKSLQQQLIQVMDRICKLVDTIPADKLIALDCGNELLQQRNIRRKLLAEADCNTNDASL
LGWIWRRRPDSLCSPVEGDSYPREISMKELNSSHLSLDSVSPGECLLTTTPGKTGFSARK
DLFERPLFNSHLQESFVSSNWAETPRLQKRNESSYFPGNVLTSTAVKDQNKHTASISDLE
RETQASYDIDNFDIDDFDDDDDWENIMHNLAASKSSTAAYQPIKEGPPIKSVTERIASAK
TNCLPVASTAQNINSSESIQSYTDKSAQNLASRNLKHERFQSLSFPHTKEMMKIFHKKFG
LHNFRTNQLEAINAALLGEDCFILMPTGGGKSLCYQLPACISPGVTVVISPLRSLIVDQV
QKLTSLDIPATYLTGDKTDSEATTIYLQLSKKDPIIKLLYVTPEKVCASNRLISTLENLY
ERKLLARFVIDEAHCVSQWGHDFRQDYKRMNMLRQKFPCVPVMALTATANPRVQKDILTQ
LKILSPQVFSMSFNRHNLKYYVLPKKPKKVAFDCLEWIRKHHPYDSGIIYCLSRRECDTM
ADTLQKGSLAALAYHAGLTDSARDEVQHKWINQDGCQVICATIAFGMGIDKPDVRFVIHA
SLPKSVEGYYQESGRAGRDGELSHCLLFYTYHDATRLKRLIMMEKDGNHHTRETHLNNLY
SMVHYCENITECRRIQLLAYFGEHGFNPDFCKKHPDASCDNCCKTKDYKTRDVTDDVKNI
VRFVQEHSLSQGTRNIKHVGPSGRFTLNMLVDIFLGSKSAKIQSGIFGKGSAYSRHNAER
LFKKLILDKILDEDLYINANDQAIAYVMLGNKAQSVLNGHLKVDFMETENSSSIKKQKAL
VAKVSQREEMVKKCLGELTEVCKSLGKVFGVHYFNIFNTVTLKKLAESLSSDPEVLLQID
GVTEDKLEKYGAEVISVLQKYSARTLPAEDSSPGTSLASNRGPGRNAPEELNEDIPVSSH
YFANKARNERKRRKMPASQKAKRRKTGCGGSKAKGGSTTCRKIASKTKSSSVIGTSSASH
GSQATLGASRKLGIMAPPKPINRPFLKPSYAFS
NT seq
4242 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgtccctcaaaataatctacaggaacaactggagcgtcactcagccagaaga
cttaataataaattaagtctttcaaaaccaaagtcttcaggtttcacttttaaaaagaaa
acatcttcagaaagcgatgtgtctctgactagtgtgtcagttgcaaaaatgcctgtgtta
agtaataaagatgttaatgttactgaggacttttccttcagtgaacctctatcccacatc
aaaaatcagtcgaccaggatcagtgacgtcttcaagaatgctccagagggacagcaaacc
cagagacttgcttcaaaaccatcattgcagattccgaaggaagttttatgcactacccag
aatacaccagttataaagaaatctcgtgatgctgctttcaagacattagaatttagttct
tcatcagattcttttaatgccattgatgattgggacgatatggatgacttcgatactact
gggacttcaaaagcatttgttacaccgtccagaaatcacttcgtaagagtaagcactgct
cagaaatcaaaaaaggctaagagaaactttttaaaagcacagctttataaaacaaataca
gtaaatattgatttgacttcctcctctgaaagcaagcaagtagatttgactaaggagcaa
aaggatgactcagaatggttaagtagcgatgtgatttgcattgatgatggccctgttttc
aaagtgcctacaagtgaagatactcagaaaagtcactctttggaaactcatttgggagat
gaaagagataatagtgaaaagaagaacaatttggaagaagctgaattacattcaactgag
aaagtcccatgtattgaatttgatgatgatgattacaatatagattttgttccaccttct
ccagaagaagaaattaattctaccacttcttcttctttaaaatgctttagtatgttaaag
gacctggacacctctgaggaaaagaaggatgttcttagcacatcagaagatcttttgtca
gcacctgagaatgtgcctacacagaagccccatccagaagccagcacagattgtgacgct
ggacagaaaagtttacagcagcagcttattcaggtgatggaccgcatctgtaaattagtt
gatactattcctgctgataaactgatagctttggattgtgggaatgaactacttcagcag
cgaaacataagaaggaagctcctagcggaggcagattgcaacacaaatgatgccagtctt
cttggctggatatggagacgcaggcctgactcactttgtagccctgtggagggtgattct
tacccaagggaaatttctatgaaggaattaaattcttcacacctttctttagattctgtt
tcccctggggaatgtttactgaccaccaccccaggaaaaacaggattctcagccaggaag
gatctctttgaaaggcctttattcaattcccatttacaggagtcctttgtaagtagcaac
tgggctgaaacaccgaggctacaaaaaagaaatgaaagctcttatttcccaggaaatgtt
ctcacaagcactgctgtgaaagatcagaataaacacactgcttcaataagtgacttagaa
agggaaactcaggcttcctatgatattgataattttgacatagatgactttgatgatgat
gatgactgggaaaatataatgcataatttagcagccagcaaatcttccaccgctgcctat
caacctatcaaagaaggtccgccgattaaatcagtaacagaaagaattgcttcagccaag
acaaactgtcttccagtggcatctactgctcaaaatataaactcctcagagtcaattcag
agttacactgacaagtcagcacaaaatttagcatccagaaatctgaaacacgagcgtttc
caaagtcttagttttcctcatacaaaagaaatgatgaagatttttcataaaaaatttggc
ctgcataattttagaactaatcagctagaggcgatcaatgctgcacttcttggtgaagac
tgttttatcctaatgccgactggaggtggtaaaagtttgtgttaccagctacctgcttgt
atttctcctggggtcactgttgtcatttctcctttgagatcactgatagtagatcaagtc
caaaagctgacttccttggatattccagctacatatctcacaggtgataagactgactca
gaagctacaactatttacctccaattatcaaaaaaagacccaattataaaacttctatat
gttactccagagaaggtctgtgcaagcaacagactgatttctactctggagaacctgtat
gagaggaagctcttggcacgttttgttatagatgaagcacattgtgtcagtcagtgggga
catgattttcgacaagattacaaaagaatgaatatgcttcgccagaagtttccctgtgtt
cccgtgatggctcttaccgccacagctaatcctagggtacagaaggacatcctcactcag
ttgaagatcctcagccctcaggtgtttagcatgagctttaaccggcataatctgaaatat
tacgtattaccgaaaaagcctaaaaaggtggcatttgattgcttagaatggatcagaaag
catcacccatatgactcaggaattatttactgcctgtccaggagagaatgtgacacaatg
gctgacaccttacagaaaggcagtctcgctgctcttgcctatcacgcaggcctcactgat
tctgccagagatgaagtgcagcacaagtggattaatcaggatggctgtcaggttatctgc
gcgacaattgcatttggaatggggattgacaagcctgacgtgcgatttgtgattcatgca
tctctccctaaatctgtggagggttactaccaggaatctggcagagctgggagagatggg
gaactatctcactgcctgcttttctatacctatcatgacgcgaccagactgaaaagactt
ataatgatggaaaaagatggaaaccatcatacgagagaaactcacttaaataatttgtat
agcatggtacattactgtgaaaatataacagaatgcagaagaatacagcttttggcttac
tttggtgaacatggatttaatcctgatttttgtaagaaacacccagatgcttcttgtgat
aattgctgtaaaacaaaggattataaaacaagagatgtgactgatgatgtgaaaaacatt
gtaaggtttgttcaagaacacagtttatcacaaggaacaagaaatataaaacatgtaggt
ccttctggaagatttactctgaatatgctggttgacattttcttggggagtaagagtgca
aaaattcaatcgggtatatttggaaagggatctgcttattcacgacacaatgccgaaaga
ctgtttaaaaagctgatacttgacaagattttggatgaagacttatatatcaatgccaat
gaccaggcaatcgcttatgtgatgcttggaaataaagcccaatctgtactaaatgggcat
ttgaaggtagactttatggaaacagaaaattccagcagtatcaaaaaacaaaaggcttta
gtagcaaaagtttctcagagggaagagatggttaagaaatgtcttggagaacttacagaa
gtctgcaaatctctggggaaagtttttggtgtccattacttcaatatttttaatactgtc
actctcaagaagcttgcagaatctttatcttccgatcctgaggttttgcttcaaattgat
ggtgttactgaagacaaactggaaaaatatggtgcagaagtgatttcagtattacagaag
tactctgcacggacactgccagctgaggacagctccccagggacaagcttggccagcaac
cgaggccccgggagaaatgcccctgaggaactcaatgaggacatccctgtgtcttctcac
tactttgcgaataaagccagaaacgaaagaaaaaggagaaagatgccagcctcccagaaa
gccaaaaggagaaaaactggttgtggtggttccaaggcaaaagggggatctaccacatgc
agaaagatagcttccaaaactaaatcctccagcgtgattggaaccagctcagcctcacat
ggttctcaagcaacattgggagccagtaggaaattggggattatggctccaccaaaacct
ataaatagaccgttccttaagccttcgtacgcattctcctaa
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integrated database retrieval system
