Carlito syrichta (Philippine tarsier): 103262509
Help
Entry
103262509 CDS
T07836
Symbol
SDC1
Name
(RefSeq) syndecan-1
KO
K06257
syndecan 1
Organism
csyr
Carlito syrichta (Philippine tarsier)
Pathway
csyr04512
ECM-receptor interaction
csyr04514
Cell adhesion molecule (CAM) interaction
csyr04820
Cytoskeleton in muscle cells
csyr05144
Malaria
csyr05205
Proteoglycans in cancer
csyr05418
Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
csyr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
103262509 (SDC1)
04514 Cell adhesion molecule (CAM) interaction
103262509 (SDC1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
103262509 (SDC1)
09160 Human Diseases
09161 Cancer: overview
05205 Proteoglycans in cancer
103262509 (SDC1)
09174 Infectious disease: parasitic
05144 Malaria
103262509 (SDC1)
09166 Cardiovascular disease
05418 Fluid shear stress and atherosclerosis
103262509 (SDC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
csyr04131
]
103262509 (SDC1)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
csyr04090
]
103262509 (SDC1)
00535 Proteoglycans [BR:
csyr00535
]
103262509 (SDC1)
Membrane trafficking [BR:
csyr04131
]
Exocytosis
Calcium ion-dependent exocytosis
Acrosomal exocytosis proteins
103262509 (SDC1)
CD molecules [BR:
csyr04090
]
Proteins
103262509 (SDC1)
Proteoglycans [BR:
csyr00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
103262509 (SDC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Syndecan
Romo1
Motif
Other DBs
NCBI-GeneID:
103262509
NCBI-ProteinID:
XP_021569088
UniProt:
A0A3Q0E504
LinkDB
All DBs
Position
Unknown
AA seq
455 aa
AA seq
DB search
MSGGALRLIPYGESLEEPSHHELQTKGAPGEGTLFSGDADKAGPGCREDPFLCASSKRNM
TFLPEDEGIPVGFTAMVYTRLEPWLAAELVHRTLMLLGALSLNHWTRSRDLSGDLPSPSP
QSLAHLACLEVASLNPGSSGIVPGALKSGTGSAFGPQSFLADGPQDLILSQIVATNVPPE
DQDSSGDDSDNFSGSGAGALRDITLSQQTPSTWKDMWLLTATPTAPEPTGPEAPATSTSV
QLAGEGQEEGKPVVLSETEPDLTAREQEATLTPRETTQLPTTHQASTARATTAQAPATSH
PNKDMQPGHHETSAPAGPGQADPHTPSVEDRGPSATEKAVEDGTSNQLPAGEGSGEQDFT
FEISGENTAVVAVESDHRNQPPVDQGASQGLLDRKEVLGGVIAGGLVGLIFAVCLVGFML
YRMKKKDEGSYSLEEPKQANGGAYQKPTKQEEFYA
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgtctgggggagcattgaggctgatcccctatggagagtccctggaagaaccctcgcac
catgaacttcagaccaaaggtgctcctggagaaggaaccttgttctctggggatgccgac
aaagctgggccaggctgcagggaggaccctttcctctgtgcttcctccaagagaaacatg
acttttctccctgaggatgagggcatcccagtgggcttcaccgcgatggtatacacacga
ctggagccctggctggctgcagagcttgttcataggactctgatgctacttggggccttg
tctttgaaccactggactcggtcaagggacctgagtggagacttgccctccccaagcccc
cagtccttggcccacttggcatgcctggaggtggcctccctgaatccaggttcttctggg
attgttcctggtgctctcaaaagtgggacagggtcagcatttggaccccaaagcttcttg
gctgatggcccccaagacctgattctcagccaaattgtggccacaaatgtgccccctgaa
gaccaggacagctctggggatgactctgacaacttctctggctcaggcgcaggtgctttg
cgagatatcaccttatcacaacagaccccctccacctggaaggacatgtggctcctgaca
gccacacccacagctccagagcccactggcccagaggccccggccacctccacctccgtc
cagctggcaggagagggacaagaggagggaaagcctgtagtcctgtcagaaacagaacct
gacctcactgcccgggagcaggaggccaccctcacacccagggagaccacacagctccca
accacccatcaggcctcaacagccagagccaccacagcccaggcgcccgccacctctcac
cccaacaaggacatgcagcctggccaccatgagacctcagctcccgcagggcctggtcaa
gctgaccctcacactcccagcgtggaggacaggggtccttctgccaccgagaaggctgtt
gaggatggaacctccaatcagctcccagcaggagagggctctggagagcaggactttacc
tttgaaatttccggggagaacacagctgtagtggctgtggagtctgaccaccggaaccag
ccccccgtggatcagggggcctcacagggcctcctggacaggaaggaggtactaggagga
gtcattgctggaggcctggtggggctcatctttgctgtgtgcctggtgggtttcatgcta
taccgcatgaagaagaaggacgagggcagctactccttggaagagccaaaacaagccaat
ggtggggcctaccagaaacccaccaagcaagaggagttctacgcctga
DBGET
integrated database retrieval system