KEGG   Carlito syrichta (Philippine tarsier): 103262509
Entry
103262509         CDS       T07836                                 
Symbol
SDC1
Name
(RefSeq) syndecan-1
  KO
K06257  syndecan 1
Organism
csyr  Carlito syrichta (Philippine tarsier)
Pathway
csyr04512  ECM-receptor interaction
csyr04514  Cell adhesion molecule (CAM) interaction
csyr04820  Cytoskeleton in muscle cells
csyr05144  Malaria
csyr05205  Proteoglycans in cancer
csyr05418  Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:csyr00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    103262509 (SDC1)
   04514 Cell adhesion molecule (CAM) interaction
    103262509 (SDC1)
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    103262509 (SDC1)
 09160 Human Diseases
  09161 Cancer: overview
   05205 Proteoglycans in cancer
    103262509 (SDC1)
  09174 Infectious disease: parasitic
   05144 Malaria
    103262509 (SDC1)
  09166 Cardiovascular disease
   05418 Fluid shear stress and atherosclerosis
    103262509 (SDC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:csyr04131]
    103262509 (SDC1)
  09183 Protein families: signaling and cellular processes
   04090 CD molecules [BR:csyr04090]
    103262509 (SDC1)
   00535 Proteoglycans [BR:csyr00535]
    103262509 (SDC1)
Membrane trafficking [BR:csyr04131]
 Exocytosis
  Calcium ion-dependent exocytosis
   Acrosomal exocytosis proteins
    103262509 (SDC1)
CD molecules [BR:csyr04090]
 Proteins
  103262509 (SDC1)
Proteoglycans [BR:csyr00535]
 Cell surface proteoglycans
  Syndecan family (transmembrane HSPG)
   103262509 (SDC1)
SSDB
Motif
Pfam: Syndecan Romo1
Other DBs
NCBI-GeneID: 103262509
NCBI-ProteinID: XP_021569088
UniProt: A0A3Q0E504
LinkDB
Position
Unknown
AA seq 455 aa
MSGGALRLIPYGESLEEPSHHELQTKGAPGEGTLFSGDADKAGPGCREDPFLCASSKRNM
TFLPEDEGIPVGFTAMVYTRLEPWLAAELVHRTLMLLGALSLNHWTRSRDLSGDLPSPSP
QSLAHLACLEVASLNPGSSGIVPGALKSGTGSAFGPQSFLADGPQDLILSQIVATNVPPE
DQDSSGDDSDNFSGSGAGALRDITLSQQTPSTWKDMWLLTATPTAPEPTGPEAPATSTSV
QLAGEGQEEGKPVVLSETEPDLTAREQEATLTPRETTQLPTTHQASTARATTAQAPATSH
PNKDMQPGHHETSAPAGPGQADPHTPSVEDRGPSATEKAVEDGTSNQLPAGEGSGEQDFT
FEISGENTAVVAVESDHRNQPPVDQGASQGLLDRKEVLGGVIAGGLVGLIFAVCLVGFML
YRMKKKDEGSYSLEEPKQANGGAYQKPTKQEEFYA
NT seq 1368 nt   +upstreamnt  +downstreamnt
atgtctgggggagcattgaggctgatcccctatggagagtccctggaagaaccctcgcac
catgaacttcagaccaaaggtgctcctggagaaggaaccttgttctctggggatgccgac
aaagctgggccaggctgcagggaggaccctttcctctgtgcttcctccaagagaaacatg
acttttctccctgaggatgagggcatcccagtgggcttcaccgcgatggtatacacacga
ctggagccctggctggctgcagagcttgttcataggactctgatgctacttggggccttg
tctttgaaccactggactcggtcaagggacctgagtggagacttgccctccccaagcccc
cagtccttggcccacttggcatgcctggaggtggcctccctgaatccaggttcttctggg
attgttcctggtgctctcaaaagtgggacagggtcagcatttggaccccaaagcttcttg
gctgatggcccccaagacctgattctcagccaaattgtggccacaaatgtgccccctgaa
gaccaggacagctctggggatgactctgacaacttctctggctcaggcgcaggtgctttg
cgagatatcaccttatcacaacagaccccctccacctggaaggacatgtggctcctgaca
gccacacccacagctccagagcccactggcccagaggccccggccacctccacctccgtc
cagctggcaggagagggacaagaggagggaaagcctgtagtcctgtcagaaacagaacct
gacctcactgcccgggagcaggaggccaccctcacacccagggagaccacacagctccca
accacccatcaggcctcaacagccagagccaccacagcccaggcgcccgccacctctcac
cccaacaaggacatgcagcctggccaccatgagacctcagctcccgcagggcctggtcaa
gctgaccctcacactcccagcgtggaggacaggggtccttctgccaccgagaaggctgtt
gaggatggaacctccaatcagctcccagcaggagagggctctggagagcaggactttacc
tttgaaatttccggggagaacacagctgtagtggctgtggagtctgaccaccggaaccag
ccccccgtggatcagggggcctcacagggcctcctggacaggaaggaggtactaggagga
gtcattgctggaggcctggtggggctcatctttgctgtgtgcctggtgggtttcatgcta
taccgcatgaagaagaaggacgagggcagctactccttggaagagccaaaacaagccaat
ggtggggcctaccagaaacccaccaagcaagaggagttctacgcctga

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