Carlito syrichta (Philippine tarsier): 103263905
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Entry
103263905 CDS
T07836
Symbol
COL18A1
Name
(RefSeq) collagen alpha-1(XVIII) chain isoform X1
KO
K06823
collagen type XVIII alpha
Organism
csyr
Carlito syrichta (Philippine tarsier)
Pathway
csyr04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
csyr00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
103263905 (COL18A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csyr04147
]
103263905 (COL18A1)
00535 Proteoglycans [BR:
csyr00535
]
103263905 (COL18A1)
00536 Glycosaminoglycan binding proteins [BR:
csyr00536
]
103263905 (COL18A1)
Exosome [BR:
csyr04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
103263905 (COL18A1)
Proteoglycans [BR:
csyr00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
103263905 (COL18A1)
Glycosaminoglycan binding proteins [BR:
csyr00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
103263905 (COL18A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Endostatin
Collagen
DUF959
Collagen_trimer
Fz
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
103263905
NCBI-ProteinID:
XP_008059765
Ensembl:
ENSTSYG00000035694
UniProt:
A0A1U7TPN8
LinkDB
All DBs
Position
Unknown
AA seq
1762 aa
AA seq
DB search
MAPNPSGCCLLLLLTWCLAGAHADLLNLGWLWSNNVNPATTLVPEPRGHSPGQPTSDATL
YVDPRDGSTEQATAPASPKPPWEVLEGGQDAPTSATSTDTQEENIAGVGARILNVAQGIR
SFVQLWDDATPTGSTAGMETPALEAPVDTLALPGPSSTPQENGATLWPNSGAPSSVGAGV
TEAGTLPVPTQVAPSPDRSQDPLQGPPGPALSPGRASLSSVPVGTPPQGSQQSPGQPQDQ
DSKGLPPGAASPILQHQLSDVRLHSSPLHPLVMGSLGTHAGPSAWSSAPQGRLSQIALTA
LIGAGGAWASHSADSVGPSLANDSALFGAGLLPPAGRCLPLPPSLLVCGRLGIGSAWLPN
HLHHGSSEEVRVAARVWEALLQTHCHPFLTWFFCLLLAPPCGRAPLPAPPPCRQFCEALE
DACWSHLEGGRLPVACTLLPTQEDGHCVFIGPAAEHMGEEVGLLQLFGEPPPLHITQIED
RDVGSAYVFGPDANSGQVARYHFPSPFFRDFSLLFHVRPTTEGAGVLFAITDAAQVVVSL
GVKLSGVQDGHQHITLLYTEAGASQTHTAASFRLPAFVGQWKRFALSVDGGSVALYVDCK
EFQRVPLVRSSHSLELEPGAGLFVAQAGGADPDKFQGMIAELRVRRDAQVSPLHCLEEED
DDLDEASGDFGSGLEGTRELLREETSASLKPSLPKPPPVTSPPLAGDGSTEDSRMDEIEE
ETTVATLGAQTLPGSDSMRDGSVRSPGNSLKEGGLKGQKGEPGIPGLPGRTGPPGPPCSI
GPPGLPCPFSPWGPEGPISPQGPSGPNAQPVPGPQGPPGLPGKDGAPGRDGKPGDAGEDG
KPGDTGPQGFPGTPGDIGPKGEKGDPGVGARGPPGPQGPPGPPGPSFRHDKLTFIDMEGS
GFGGDLETLRGPRGFPGPPGPPGVPGLPGEPGRFGVNSSDIPGPAGLPGVPGRDGAPGFP
GPPGPPGPPGREGPPGRTGQKGSLGEAGAPGPKGSKGDPGLAGVPGESGLAGAPGPTGPP
GPPGPPGPPGPGFAAGFDDMEGSGGPFWSTARGSDGPQGPPGLPGLKGDPGIHGPPGAKG
EVGADGAPGFPGIPGREGPSGPQGPKGERGSQGEKGDAGKDGVGQPGLPGPPGPPGPVVY
VSEQDGTVLSVPGPEGRPGFAGFPGPAGPKGDSGSKGERGSPGPKGEKGEPSSIFGPDGS
ILAPAQKGAKGEPGFRGPPGPYGRPGYKGEIGFPGRPGRPGVNGLKGEKGEPGDANLGIG
MRGLPGLPGPPGPPGPPGTPVYDSNAFVESSHPGPPGLPGYQGPPGPKGEKGEVGPPGPP
GQFPFDLLRLEAEMKGEKGDRGAAGQKGERGEPGAGGFFGSSVPGPPGPPGPPGYPGIPG
TKGESIRGQPGPPGPQGPPGIGYEGRQGPPGPPGPPGPPSFPGPHRQTISIPGPPGPPGP
PGPPGTMGASAGVRIWATRQAMLDTVHEVPEGWLLFVAEREELYVRVRNGFRKVQLEART
PLPRGTDNEVAALQPPVVQLHDSNPYPRREHAHSTERPWRADDILASPPHLPDPRPYPGV
SHHGSYMHLRPVRPTGSPAHTHQDFQPVLHLVALNSPLSGGMRGIRGADFQCFQQARAVG
LAGTFRAFLSSRLQDLYSIVRRADRGAVPIVNLKDEVLFPSWEALFSGTEGQLKPGTRIF
SFDGKDVLRHPAWPQKSVWHGSDPSGRRLTESYCETWRTESPAATGQASSLLAGRLLGQK
AVGCHHAYIVLCIENSFMIASK
NT seq
5289 nt
NT seq
+upstream
nt +downstream
nt
atggctcccaaccccagcggctgctgcctgctgttgctcctcacctggtgtttggcgggg
gcccacgctgacctgctgaacctgggctggctgtggtccaataacgtcaaccctgctacg
accctcgtccctgagccccgaggtcattcgcctgggcagcccacgtcagacgctaccttg
tatgtggacccccgagatggctccacggagcaagccacagctcctgccagtcccaagcca
ccctgggaggtgctggagggcggccaggatgctcccacatctgccacgagcacagacacg
caggaggagaacatcgctggtgtcggagccagaatcctgaatgtggcccagggcatccgg
agcttcgtccagctgtgggatgacgccacccccaccgggagcactgctggaatggagaca
ccagccctcgaggcccccgtggacacccttgccctccctgggccctccagcacccctcag
gagaacggggccacactctggccaaacagtggtgctcccagctctgtgggtgctggtgtg
actgaagctggcaccctgcctgtacccactcaggtggccccctctccagacaggtcccag
gatccactccaggggcctccaggaccagcactgtccccaggtagagcgtctctctcctcc
gtgccggtcgggacccctccccaaggaagccagcagtccccagggcagccccaggatcag
gacagcaagggactcccgcctggggcagccagccccatccttcagcaccaactctctgat
gtccgcctgcactcttcgcctctgcaccccctggtgatgggttctctgggcacacatgct
ggcccctctgcttggtcctctgcaccccagggcagactgtctcagatagcactcacggct
ttgattggggccgggggtgcttgggcttctcactctgctgactccgtagggccaagtctt
gccaatgactctgccctgtttggggctggcctcttgccgcctgctggccgctgcctgcct
ctgccaccctccctgttggtctgtggccgcctgggtattgggagcgcctggttgcccaac
cacctccaccacgggagcagtgaggaagtgcgagtggctgcacgggtgtgggaggccttg
ctgcagacgcactgccaccccttcctcacctggtttttctgcctgctactggctccccca
tgtggccgtgccccgctgcccgccccaccaccctgccgccagttctgtgaggccctggag
gatgcgtgctggagccacctggaagggggccggctgcccgtcgcctgcaccttgctgcca
acccaggaggatgggcactgtgtgttcattgggccggctgcagagcacatgggtgaggag
gtggggcttctgcagctctttggggagccaccacccctgcacatcacccagatcgaggac
cgcgacgtggggtcagcctatgtcttcggaccagatgccaacagtggccaggtggcccgg
taccacttccccagccccttcttccgtgacttctcactgctgttccatgtccggccaacc
acagagggtgcaggggtactgttcgccatcacagatgcagcgcaggtggtggtctctctg
ggtgtgaagctctctggggtgcaggatggacaccagcacatcaccctgctttatacggag
gcgggtgctagccagacccacacggcagccagcttccgcctacccgccttcgtcggccag
tggaagcgctttgcactcagtgtggatggtggctctgtagcactctatgtggactgcaag
gagttccagagagtgccactggtccggtcctcacatagcctagagctggagcctggtgcc
ggtctctttgtggcccaggcaggaggagcggaccctgacaagttccaggggatgattgca
gagctgagggtgcgcagggacgcccaggtgagccccctgcactgcctggaggaggaggac
gatgacttggatgaggcttctggagactttggcagcgggctggaggggacccgagagctt
ctcagggaggagacgagcgcatccctaaaacccagcctccccaagcctccccctgtcact
tctccacccttggctggagacggcagcacagaagattctaggatggatgaaattgaggaa
gaaaccacagtggctacgttaggagctcaaacccttcctggctctgattccatgagggat
gggagtgtccggagccctgggaacagcctgaaagagggaggcctgaaggggcagaaggga
gagccgggtattccgggcttgcctggccgcactggtcccccgggccctccatgctccatt
ggtcccccaggactcccgtgcccattcagtccctggggtccagaaggccccatcagtccc
cagggcccctcaggtccaaatgcacaacctgtccctgggccacagggacccccgggattg
ccagggaaggacggtgccccaggaagagacggcaagccgggggacgctggcgaggatgga
aaacccggtgacactgggccacagggcttcccggggaccccgggagacattggccccaag
ggtgagaagggagatcctggggtcggggcaagaggacccccaggacctcaagggcctcca
gggcccccaggaccctccttcagacatgacaagctgaccttcattgacatggagggctct
ggctttggtggtgacctggagacactgcggggccctcgaggcttccccggcccccccgga
ccccctggtgtcccaggtctgccgggcgagcctggccgcttcggggtgaacagctctgac
atcccaggacccgcagggcttcctggtgtgcccgggcgggatggagcccctgggtttcct
ggccccccgggaccccctggtcctccaggaagagaggggccccccggaaggactgggcag
aaaggcagcctcggtgaagcaggtgcccccggacccaagggaagcaagggagaccccggc
cttgctggtgttcctggggagagtggccttgcaggagctcctggacccactggaccacca
ggcccccctggaccccctgggcccccaggaccaggattcgctgctggatttgatgacatg
gaaggctccgggggacccttctggtcgacggcccgaggctccgatgggccacagggacca
cctggcctgccaggactcaagggggatcctgggattcatggacctccaggggccaaggga
gaagttggagcagatggcgcccccgggtttcccggcatccctggcagagagggcccttct
gggccccagggaccaaaaggagagagaggaagtcagggagaaaaaggcgacgcagggaag
gacggagtgggacaaccgggcctccctggaccccccggacctccaggacctgtggtttac
gtgtcagagcaggacggaactgtcctgagtgtgccaggacccgagggcaggccaggattt
gcaggctttcctggacccgcaggccccaagggcgactctggctccaaaggcgagcggggc
tccccaggacccaagggtgagaagggggagcccagcagcatctttggccccgatggcagc
atcctggccccagcccagaaaggagccaagggagagccaggcttccgaggacccccgggc
ccctatggacgacctgggtacaagggagagattggctttcccggacggccgggtcgtccc
ggggtgaatggactgaaaggagagaaaggggagccaggagacgccaaccttggaattggc
atgaggggactgcctggtctcccagggcctccaggacccccaggccctccagggactcct
gtctacgacagcaatgcatttgtcgagtccagccaccctgggcctccgggattgccaggg
taccagggccctccaggaccaaagggcgagaaaggagaagtgggcccacccggaccacca
gggcagttcccgttcgacctcctccgcttggaggctgaaatgaagggagagaagggggac
cgaggggctgcaggacagaaaggcgagaggggtgagcccggagctggtgggtttttcggc
tccagcgtgcccggtccccctggccctccaggaccaccaggctatcctggaattccgggt
accaagggagagagcatccggggtcaacctggcccacctggacctcaaggaccccccggc
attggctatgagggacgccagggccctcctggtccccccggcccccctggccccccttca
ttccctggccctcacaggcagaccatcagcattcctgggcccccaggcccacctggcccc
cccggaccccctggaaccatgggtgcctccgcaggagtacgcatctgggccacacgtcag
gccatgctggacacggtgcacgaggtgcctgagggatggctactcttcgtggctgagcgg
gaggagctctatgtgcgagtgcgcaacggcttccgcaaagtccagctggaggcccggacg
ccactcccacgagggacagacaatgaagtggcagccctgcagccccccgtggtacagcta
catgacagcaacccatacccccggcgggaacacgctcattccaccgagaggccctggcgg
gcagatgacatcctggccagcccccctcatctgcctgacccccggccttaccccggagta
tcacaccacggctcctacatgcacctgcgaccagtgcgtcccacgggctcccccgcccat
acccaccaggacttccagccagtgctgcacctagtggcactcaacagcccactgtcaggt
ggcatgcgtggaatccgtggggccgacttccagtgcttccagcaggcgcgggccgtgggg
ctggcaggaaccttccgagccttcctgtcctcacggctgcaggacctctacagcattgtg
cggcgtgccgaccgcggggccgtgcccattgtcaaccttaaggatgaggtgctgtttccc
agctgggaggccctgttctcaggcaccgagggccagctgaagcccgggacccgcatcttc
tccttcgatggcaaggacgtcctgcggcaccctgcctggccccagaagagcgtgtggcat
ggctcggaccccagcgggcgtaggctgactgagagctactgtgaaacatggcggacagaa
tcccctgcagccacgggccaggcctcctcgctgctggcaggcaggctcctgggtcagaaa
gccgtaggctgccaccatgcctacatcgtgctctgcatcgagaacagcttcatgatagcc
tccaagtag
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integrated database retrieval system
