Carlito syrichta (Philippine tarsier): 103264554
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Entry
103264554 CDS
T07836
Symbol
SCAF8
Name
(RefSeq) protein SCAF8
KO
K13191
RNA-binding protein 16
Organism
csyr
Carlito syrichta (Philippine tarsier)
Brite
KEGG Orthology (KO) [BR:
csyr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csyr03021
]
103264554 (SCAF8)
03041 Spliceosome [BR:
csyr03041
]
103264554 (SCAF8)
Transcription machinery [BR:
csyr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
103264554 (SCAF8)
Spliceosome [BR:
csyr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
103264554 (SCAF8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CID
RRM_1
Transformer
DUF3525
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
103264554
NCBI-ProteinID:
XP_021570255
Ensembl:
ENSTSYG00000010991
UniProt:
A0A3Q0E7K8
LinkDB
All DBs
Position
Unknown
AA seq
1267 aa
AA seq
DB search
MDTRSILYSLNDYKPPISKAKMTQITKAAIKAIKFYKHVVQSVEKFIQKCKPEYKVPGLY
VIDSIVRQSRHQFGQEKDVFAPRFSNNIISTFQNLYRCPGDDKSKIVRVLNLWQKNNVFK
SEIIQPLLDMAAGIPPPVVTPVLASTTAAMSNTPGTPVTPVTPANVVQGLPDPWVSQITN
TDTLAAVAQILQSPQGQQLQQLIQTLQIQQQKPQPSILQALDAGLVVQLQALTAQLTAAA
AAANTLTPLEQGVSFNKKLMDRFDFGEDSEHNEEPKKEIPTSQLSHVSESVNNSIFHQIA
EQLQQQNLEHLRQQLLEQQQPQKATPQDSQEGTFGSEHSASPSQGSSQQHFLEPEVNLDD
SIDIQQQDMDIDEGQDGVEEEIFEQEAKKVAVRSRSRTHSRSRSRSPRKRRSRSRSGSRK
RKHRKRSRSRSRERKRKSSRSYSSERRAREREKERQKKGLPPIRSKTLSVCSTTLWVGQV
DKKATQQDLTNLFEEFGQIESINMIPPRGCAYVCMVHRQDAFRALQKLSSGSYKIGSKVI
KIAWALNKGVKTEYKQFWDVDLGVTYIPWEKVKVDDLEGFAEGGMIDQETVNTEWETVKS
SEPVKETVQTTQSPAPVEKETVVTTQAEVFPPPVAMLQIPVAPAVPTVSLVPPAFPVSMP
VPPPGFSPIPPPPFLRASFNPSQPPPGFLPPPVPPPVVPPPAIPPVVPTSLVQPPLSMTP
ETVKDVGFGSLVIPGGSVASSLAASTLPGGNVFNPPTKQAEPEEKVPHLIDHQISSGENT
RSVIPNDISSNAAILGGQLPNVTSNSGILGIQRPNVSSNSEILGVRPSNVSSSSGIIGAQ
PPSILNNSGILGIQPPSVSNSSGLLGVLPPNIPNNSGLVGVQPPNVPNTSGLLGTQPPAG
PQNLPPLSIPNQRMPAMPMLDIRPGLIPQAPGPRFPLIQPGIPPQRGIPPPSVLDSALHP
PPRGPFPPGDIFSHPERPFLAPIRPSVDNVTNPEKRIPLGNENIQQEGDRDYRFPPLEAR
ESITRPPPVDVRDVVGRPIDPREGPGRPPLDGRDHFGRPPIDIRENLVRPGLDHLGRRDH
FGFNPEKPWGHRGDFDEREPRVLPVFAGPKGLHEERGRFRPGNYRFDPRSGPWNRGFGQE
VHRDFDDRRRPWERQRDRDDRDFDFCREMNGNRLGRDRIQNTWVPPPHARVFDYFEGATS
QRKGDNVPQINGENTERHAQPPPLPVQNDPELFEKLTSSNEINKEKSDTVADIKSEPVVE
STETEGT
NT seq
3804 nt
NT seq
+upstream
nt +downstream
nt
atggacacaagaagcatattgtattccctgaatgactataaaccacccatttctaaagcg
aaaatgacccaaattactaaagcagccatcaaagctattaagttctataaacatgtggta
caaagtgttgagaaatttattcagaaatgtaaaccagaatacaaagtacctggactttat
gttattgactccattgtgcgacagtcccgacatcagtttggtcaagaaaaggatgtgttt
gcacccagatttagtaataacatcattagcactttccagaatttgtatcgttgccctggg
gatgacaagagtaaaattgtgagagtactgaacttatggcagaagaataatgtgtttaag
agcgagattattcaaccccttttggatatggcagcagggattcctcctccagttgtcaca
cctgttttggccagtactactgctgccatgagcaatactccgggaacgcctgtgacacct
gtgactccagccaatgtggtccaaggcttacctgatccatgggtatctcagataacaaat
acagatacacttgcagctgtggctcagatcttacagagtcctcaaggccaacagcttcag
cagttaatacagacgttacagatccaacagcagaagccacagccttccattctgcaggcc
ctggatgccggtctcgtggttcagttgcaggcgcttacggcccagcttacagctgcagct
gcagcagccaacactcttactcccttagagcagggagtctctttcaacaagaagttgatg
gataggtttgattttggagaagattctgagcataatgaagagcccaaaaaggaaatccca
acttctcaactttctcatgtttcagaatctgtgaacaattccatttttcatcagattgct
gaacaactacagcagcaaaatctggaacatctcagacagcagcttctggaacagcagcag
cctcaaaaggccactcctcaggatagtcaggaaggaacgtttgggtcagaacattcagca
tcaccatcacaagggagcagtcaacagcattttcttgaacctgaagtcaatttggatgat
tccatagatattcagcaacaggatatggatatagatgaagggcaagatggagtggaggag
gagatctttgaacaagaagctaagaaagtggctgttcgctcaagatcaagaacccattca
cgatctcgctcaaggtcaccaagaaaacgaagatccaggtcacggtctggttctcgaaag
cgtaaacaccgaaagcgatcacgatcccgctcaagagaaagaaagagaaaatcatcacgt
tcatattcaagtgaaaggagagccagagagagggagaaagaacgacagaaaaagggatta
cctccaattagatctaaaacattaagtgtatgtagtactactctctgggttggtcaagtg
gacaagaaggcaacacagcaagatttaaccaatctgtttgaagaatttggacaaattgaa
tccattaatatgattcctcccaggggctgtgcttatgtctgtatggttcatcgacaagat
gcatttcgagctcttcagaaactcagttctggatcatataaaattgggtccaaggtcatt
aagattgcttgggctttaaacaaaggtgtaaaaacggagtacaaacagttctgggatgtg
gatcttggagttacgtatataccatgggaaaaagttaaagtggatgacttggaaggtttt
gcagaaggaggcatgattgatcaggagactgtaaatactgagtgggaaactgtgaaaagc
tcagaacccgttaaagagacagtccagacaactcagagtccagctccagtggaaaaggag
accgtggtcacaactcaggctgaggttttccctccacctgttgctatgttgcagattcca
gtggcgcctgccgtgcctacagttagtttagtcccaccagcatttcctgtatcaatgcca
gttcctcctcctggattcagtccaatccctccacctccttttctacgagcaagttttaac
ccttcacaaccaccacctggtttcttgccacctccagttcccccacctgttgtaccacca
cctgcaattccaccagtagtaccaacttctttagtgcagccaccattatccatgacccca
gaaactgtgaaagacgttggatttggtagccttgtgatcccaggtggttctgttgccagc
agtcttgctgcttctactctgccaggtggaaatgtttttaatcctccaactaaacaagca
gagcctgaagaaaaagtacctcatcttatagaccaccagatttcttctggtgaaaacacc
agatcagtgattccaaatgatatttcaagtaatgctgcaattttaggagggcaactacca
aatgtgacaagcaattctggaattctgggcatccaaagaccaaatgtatcaagtaattct
gaaattcttggggtccggccatctaatgtttccagtagttctgggattattggagcccaa
ccaccaagtattctgaacaactctggaattttgggaatacagccaccaagtgtgtcaaat
agttctggacttttgggagtgctacccccaaatatacctaacaattctggacttgtagga
gtacagccaccaaatgttccaaatacttctggacttctgggaacacagccaccagctgga
cctcaaaacttaccccctttgagtatccctaatcaaaggatgcctgcaatgccaatgcta
gacattcgtccaggactaataccacaggcacctggaccaagattccctttaatacaacct
ggaattcctccccaacggggaatccctcccccatcagtacttgactctgctcttcatcct
ccaccccgtggaccttttcctccaggagatatttttagtcatccagagagaccttttcta
gctcctataagaccaagtgtagacaatgttactaacccagaaaaaaggataccactcggg
aatgagaacattcaacaggaaggagatagagattaccgttttcctcctctagaagccaga
gaaagcattactagacctcctcctgtggatgttagagatgtggttggacggcctatagat
ccaagagaaggtcctggaaggcctccattagatggtagggatcattttggaagacctcct
atagatataagagagaatcttgtgaggccaggtctagatcatcttggtcgaagagaccac
tttggctttaatccagagaagccctggggtcatagaggagattttgatgagagagaacct
cgggttctccctgtctttgctggtccaaaaggcttacatgaagaaagaggtagatttcgg
cctggaaactatcgatttgatcctagaagtggtccttggaacagaggatttggacaagaa
gttcacagagattttgatgaccggagaagaccctgggagaggcaaagggatagggatgac
agagattttgatttctgcagagaaatgaatggaaatcgtcttggacgagatagaattcaa
aacacttgggtcccccctcctcatgctcgggtttttgattatttcgaaggggccacttct
caacgaaaaggtgataatgtgcctcagattaatggtgaaaacacagagagacatgctcag
ccaccacctttaccagtacagaatgatcctgaactttttgaaaaactgacatcttcaaat
gagataaacaaggagaagagtgacacagttgctgatataaaaagtgaaccagtggtagaa
agcacagaaactgaggggacataa
DBGET
integrated database retrieval system
