Carlito syrichta (Philippine tarsier): 103264968
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Entry
103264968 CDS
T07836
Symbol
COL3A1
Name
(RefSeq) collagen alpha-1(III) chain
KO
K19720
collagen type III alpha
Organism
csyr
Carlito syrichta (Philippine tarsier)
Pathway
csyr04611
Platelet activation
csyr04820
Cytoskeleton in muscle cells
csyr04926
Relaxin signaling pathway
csyr04933
AGE-RAGE signaling pathway in diabetic complications
csyr04974
Protein digestion and absorption
csyr05146
Amoebiasis
csyr05415
Diabetic cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
csyr00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
103264968 (COL3A1)
09150 Organismal Systems
09151 Immune system
04611 Platelet activation
103264968 (COL3A1)
09152 Endocrine system
04926 Relaxin signaling pathway
103264968 (COL3A1)
09154 Digestive system
04974 Protein digestion and absorption
103264968 (COL3A1)
09160 Human Diseases
09174 Infectious disease: parasitic
05146 Amoebiasis
103264968 (COL3A1)
09166 Cardiovascular disease
05415 Diabetic cardiomyopathy
103264968 (COL3A1)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
103264968 (COL3A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
csyr00536
]
103264968 (COL3A1)
Glycosaminoglycan binding proteins [BR:
csyr00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
103264968 (COL3A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
VWC
Motif
Other DBs
NCBI-GeneID:
103264968
NCBI-ProteinID:
XP_008060854
Ensembl:
ENSTSYG00000012975
UniProt:
A0A1U7TLD3
LinkDB
All DBs
Position
Unknown
AA seq
1466 aa
AA seq
DB search
MMSFVQKGTWLLLALFHPTVILAQQQPQEAIEGGCSHLGQSYADRDVWKPEPCQICVCDS
GSVLCDDIICDDQELDCPNPEIPFGECCAVCPQPPTAATRPPNGQGPQGPKGDPGPPGIP
GRNGDPGIPGQPGSPGSPGPPGICESCPTGTQNYSPQFDSYDVKSGVGGVGGGYPGPAGP
PGPPGPPGTVGHPGSPGSPGYQGPPGEPGQAGPSGPPGPPGAIGPSGPAGKDGESGRPGR
TGERGLPGPPGMKGPAGMPGFPGMKGHRGFDGRNGERGETGAPGLKGENGLPGENGAPGP
MGPRGTPGERGRPGLPGAAGARGNDGARGSDGQPGPPGPPGTAGFPGSPGAKGEVGPAGS
PGSSGSPGQRGEPGPQGHAGAQGPPGPPGTNGSPGGKGEMGPAGIPGAPGLMGARGPPGP
AGTNGVPGLRGGAGEPGKNGAKGEPGQRGERGEAGSPGIPGPKGEDGKDGSPGEPGANGL
PGTAGERGAPGFRGPAGPNGIPGEKGPSGERGGPGPAGPRGVAGEPGRDGAPGGPGMRGM
PGSPGGPGSDGKPGPPGSQGESGRPGPPGSSGPRGPPGVMGFPGPKGNDGAPGKNGERGG
PGGPGPQGPAGKNGEAGPQGPPGPTGPGGDKGDTGPPGPQGLQGLPGTGGPPGENGKPGE
PGPKGDAGSPGAPGGKGDSGAPGERGPPGLAGSPGLRGGAGPPGPEGGKGAAGPPGPPGT
AGSPGLQGMPGERGGPGSPGPKGEKGEPGGPGADGVPGKDGPRGPTGPIGPPGPAGQPGD
KGEGGSPGLPGIAGPRGGPGERGEHGPPGPAGFPGAPGQNGEPGAKGERGAPGEKGEGGP
PGVAGPPGGSGPAGPPGPQGGKGERGSPGGPGAAGFPGGRGLPGPPGNNGNPGPPGPSGS
PGKDGPPGPAGNSGAPGNPGVAGPKGDAGQPGEKGSPGAQGPPGAPGPLGIAGITGARGL
AGPPGMPGPRGSPGPQGVKGESGKPGANGHSGERGPPGPQGLPGLAGTAGEPGRDGNPGS
DGLPGRDGSPGGKGDRGENGSPGAPGAPGHPGPPGPVGPAGKSGDRGESGPAGPSGAPGP
AGARGAPGAQGPRGDKGEAGERGANGIKGHRGMPGTPGSPGSPGPAGHQGAVGSPGPAGP
RGPVGPGGPPGKDGTSGHPGPIGPPGPRGNRGDRGSEGSPGHPGQPGPPGPPGAPGPCCG
GGAAVAGIGGEKAGGFAPYYGDEPMDFKINTDEIMTSLKSVNGQIESLISPDGSRKNPAR
NCRDLKFCHPELKSGEYWVDPNQGCKMDAIKVFCNMETGETCINASPLSVPRKNWWKDSG
AEKKHIWFGESMDGGFQFSYGNPELPEDVLDVQLAFLRLLSSRASQNITYHCKNSIAYLD
QASGNVKKALKLMGSNEGEFKAEGNSKFTYTVLEDGCTKHTGEWSKTVFEYRTRKAVRLP
IVDIAPYDVGGPDQEFGVDIGPVCFL
NT seq
4401 nt
NT seq
+upstream
nt +downstream
nt
atgatgagctttgtgcaaaaggggacctggttacttcttgctctgtttcatcccactgtt
attttggcacaacagcagccccaggaagctattgaaggaggatgctcccatcttggtcag
tcctatgctgacagagatgtctggaagccagaaccgtgccaaatatgcgtctgtgactca
ggatctgttctctgcgatgatataatatgtgacgatcaagaattagactgtcccaaccca
gaaattccgtttggagaatgttgtgccgtttgtccacagcctccaacagctgctactcgc
cctcctaatggccaaggacctcaaggtcccaagggtgatccaggtcctcctggtattcct
ggaagaaacggtgaccctggtattccaggacaaccaggttcccctggttctcctggcccc
cctggaatctgtgaatcatgtcctactggtactcagaactattctccccagtttgattca
tatgatgtcaagtctggagtcggaggagtcggtggtggctatcctggaccagcaggtcct
ccaggccctcccggtccccctggtacagttggtcatcctggctctcctggttctccagga
taccaaggtccccctggtgaacctgggcaagcaggtccttcaggccctccaggacctcct
ggtgctataggtccatctggtcctgctggaaaagatggagagtcaggtagaccgggacga
accggagagcgaggattgcctggacccccaggtatgaaaggtccagctgggatgcctgga
tttcctggcatgaaaggacacagaggcttcgatggacgaaatggagaaagaggagaaaca
ggtgctcctggattaaagggtgaaaatggtcttccgggtgaaaatggagctccaggacct
atgggtccaagaggcactcctggtgagagaggacggccaggacttcccggagctgcaggt
gctagaggcaatgatggtgcccgaggaagcgacggtcaaccaggccctcctggtccccct
ggaactgcaggatttcctgggtcccctggtgctaagggtgaagttggacctgcagggtct
cctggttcaagtggttcccctggacaaagaggagaacctggacctcagggacatgctggt
gctcaaggtcctcctggccctcctgggactaatggtagtcctggtggcaaaggtgaaatg
ggtcccgctggcattcctggagctcctggactgatgggagcccggggtcctccaggacca
gctggtactaatggtgttcctggacttcgaggtggtgctggtgagcctggtaagaatggt
gcgaaaggagagccaggacaacgtggtgagcgtggcgaagctggttctccaggtattcca
ggacccaaaggtgaagatggtaaagatgggtcacctggagaacctggtgcaaatggactt
ccaggaactgcaggagaaaggggtgcccctggattccgaggacctgctggaccaaatggg
atcccaggagaaaagggtccctctggagagcgtggtggtccaggccccgcaggccccaga
ggagtggctggagaacctggtcgagatggtgcccctggaggtccaggaatgaggggtatg
cccggaagcccaggaggaccaggcagcgacgggaaaccaggacctcctggaagtcaagga
gaaagtggtcggccaggtcctcccgggtcatctggtccccgaggtccacctggtgtcatg
ggtttccctggtcctaaaggaaatgatggtgctcctggcaagaatggagaacgaggtggc
cctggaggacctggccctcagggtcctgctggaaagaatggtgaagctgggcctcaggga
cccccaggacctactgggccaggtggtgacaaaggagacacaggaccccctggtccgcag
ggattacaaggcttgcctggtacaggtggtcctccaggagaaaatggaaaacccggtgaa
ccagggcccaagggtgatgccggttcacctggagccccaggtggcaagggtgattctggt
gcccctggtgaacgtggacctcctggattggcaggatctccaggacttcgaggtggagct
ggtccccctggtcctgaagggggaaagggcgctgctggtccccctgggccacctggtact
gctggtagtcctggtctccaagggatgcctggagagagaggaggtcctggaagtcctggt
ccaaagggtgaaaagggtgaaccaggtggtccaggagctgatggagttccagggaaagat
ggtccacggggtcctactggtcccattggtcctcctggtccagctggccagcctggagat
aagggtgaaggtggttctcctggacttccgggtatagctggacctcgtggtggccctggt
gagagaggtgaacatggccctccaggacctgctggcttccctggcgctcctggacagaat
ggtgaacctggtgcgaaaggagagaggggtgctccaggcgagaaaggtgaaggaggccct
cctggcgtggcaggaccccctggaggttctgggcctgctggtccccctggtccccaaggt
ggcaaaggtgaacgcggcagtcctggtggtcctggtgctgccggcttccctggtggtcgc
ggtcttcctggtcctcccggtaataacggtaacccaggacccccaggtcccagtggttct
ccaggcaaggatggacccccgggtcccgcaggcaacagtggtgctcctggcaaccctgga
gtggctggaccaaaaggtgatgctggccaaccaggagagaaaggatcacccggtgcccaa
ggccctccaggagctccaggcccacttggaattgcagggattaccggagcacggggtctt
gcaggaccaccaggcatgccaggtcctaggggaagccctggccctcagggtgtcaagggt
gaaagtgggaaaccaggagctaatggccacagtggagaacgtggtcctcctggacctcag
ggtcttcctggtctggctggtacagctggtgaacctggaagagatgggaatcctggatca
gatggactgccaggccgagatggatctcctggtggcaagggtgaccgtggtgaaaatggc
tctcctggtgcccctggtgctcctggtcatccaggccctcctggccccgtcggtccagct
ggaaagagtggtgacagaggagaaagcggtcccgctggtccttctggtgctcctggtcct
gctggtgcccgaggtgctcctggagcccaaggcccgcgtggtgacaaaggtgaagcaggt
gaacgcggtgctaatggtatcaaaggacatcgaggaatgcctggtactccaggtagccca
ggttctccaggtcctgctggtcaccaaggtgcagtaggtagtccaggacctgcaggcccc
agaggacctgttggacctggtggtccccccggcaaagatggaacgagtggacatccaggt
cccattggaccaccagggcctcgaggtaacagaggtgacagaggatctgagggctcccca
ggccacccaggacaaccaggccctcctggaccccctggtgcccctggtccctgctgtggt
ggtggagccgccgttgctgggattggaggtgaaaaagctggtggatttgccccatattat
ggagatgaaccaatggatttcaaaatcaacaccgatgagattatgacttcactcaagtct
gtcaatggacagatagaaagtctcattagtcctgatggttctcggaaaaaccctgctcgg
aactgcagagacctgaaattttgtcatcctgaactcaagagtggagaatattgggtcgat
cctaaccaaggttgcaagatggatgctatcaaggtattctgtaatatggaaactggagaa
acatgcataaatgccagtcctttgagtgttccacggaaaaactggtggaaagattctggt
gctgagaagaaacatatttggtttggagagtccatggatggtggttttcagtttagctat
ggcaatcctgaacttcctgaagatgttctcgatgtgcaactggcgttcctccgcctcctc
tccagccgggcctctcagaacatcacatatcactgcaagaatagcatcgcatacctggat
caggccagtgggaatgtaaagaaagccctgaagctgatggggtccaatgaaggcgaattc
aaggctgaaggaaatagcaaattcacctacactgtcctggaggatggttgcactaaacac
actggggaatggagcaaaacagtctttgaatatcgaacacgcaaggctgtgagactacct
atcgtagatattgcaccctatgatgttggtggtcctgatcaagaatttggtgtggacatt
ggccctgtttgctttttataa
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