Carlito syrichta (Philippine tarsier): 103267320
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Entry
103267320 CDS
T07836
Symbol
PRPF40B
Name
(RefSeq) pre-mRNA-processing factor 40 homolog B isoform X2
KO
K12821
pre-mRNA-processing factor 40
Organism
csyr
Carlito syrichta (Philippine tarsier)
Pathway
csyr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
csyr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103267320 (PRPF40B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
csyr03041
]
103267320 (PRPF40B)
Spliceosome [BR:
csyr03041
]
Complex A
U1 snRNP components
U1 related factors
103267320 (PRPF40B)
Complex B
103267320 (PRPF40B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FF
WW
WW_TCERG1
DUF4936
RhoGAP-FF1
WW_2
Motif
Other DBs
NCBI-GeneID:
103267320
NCBI-ProteinID:
XP_008063108
Ensembl:
ENSTSYG00000013628
UniProt:
A0A1U7U2Z6
LinkDB
All DBs
Position
Unknown
AA seq
874 aa
AA seq
DB search
MMPPPFMPPPGIPPPFPPMGLPPMSQRPPAIPPMPPGILPPMLPPMGAPPPLTQIPGMVP
PMMPGMLMPAVPVTAATAPGADTASSAVAGTGPPRALWSEHVAPDGRIYYYNADDKQSVW
EKPSVLKSKAELLLSQCPWKEYKSDTGKPYYYNNQSKESRWTRPKDLDDLEALVKQEAAG
KQQQLQQPQTLQPQPPQPQPDPPPAPPGPTPVPTGLLEPEPGGGEDCDVSEATQPLEQGF
LQQLEEGPGSSAGQHHPSQQEEEEPKPEPERSGLSWSNREKAKQAFKELLRDKAVPSNAS
WEQAMKMVVTDPRYSALPKLSEKKQAFNAYKAQREKEEKEEARLRAKEAKQTLQHFLEQH
ERMTSTTRYRRAEQTFGELEVWAVVPERDRKEVYDDVLFFLAKKEKEQAKQLRRRNIQAL
KSILDGMSSVNFQTTWSQAQQYLMDNPSFAQDHQLQNMDKEDALICFEEHIRALEREEEE
ERERARLRERRQQRKNREAFQTFLDELHETGQLHSMSTWMELYPAVSTDVRFANMLGQPG
STPLDLFKFYVEELKARFHDEKKIIKDILKDRGFCVEVNTAFEDFAHVISFDKRAAALDA
GNIKLTFNSLLEKAEAREREREKEEARRMRRREAAFRSMLRQAVPALELGTAWEEVRERF
VCDSAFEQITLESERIRLFREFLQVLETECQHLHTKGRKHGRKGKKHHRKRSHSPSGSES
EEEELPPPSLRPPKRRRRNPSESGSEPSSSLDSVESGGAALGGRGSPSSHLLLGSDHGLR
KAKKPKKKTKKRRHKSNSPESETDPEEKAGKESDEKEQEQDKDRELRPTELPNRSPGFGI
KKEKTGWDTSESELSEGELERRRRTLLQQLDDHQ
NT seq
2625 nt
NT seq
+upstream
nt +downstream
nt
atgatgccaccacccttcatgccccctccagggatccccccaccctttcctccgatgggg
ctaccccccatgagtcagagaccacctgccattccccccatgccacctggcatcctgccc
ccaatgcttccaccaatgggggcaccaccaccactcacacagataccaggaatggtccct
ccaatgatgccaggaatgctgatgccagcagtgcctgtaaccgcagcgacggctccgggt
gcggacaccgccagctctgctgtggctgggacaggccctccgagggccctatggagtgag
catgtggcccctgatgggcgcatctactactacaatgctgacgacaagcagtccgtgtgg
gagaagcccagcgtgctcaagtccaaggcagagctgctgctatcccagtgtccctggaaa
gagtacaagtcagacacaggcaaaccttactactataacaaccagagtaaggagtcccgc
tggacccggcccaaggatctggatgacctggaggctttagtcaaacaagaggctgcaggg
aaacagcagcagctgcagcagccacagacactacagccacagcctcctcagccacagcct
gaccctccaccggctcctcctggccccaccccagtgcccacaggcctcctggaacctgag
ccaggtgggggtgaagattgtgatgtgtcggaggcaacccagcctctggagcaggggttc
ctgcagcagctggaggagggccctggcagttctgctggacagcaccatccatcacagcag
gaagaggaagaaccgaagccagaaccagagcggtctggtctcagttggagcaaccgggag
aaggcgaagcaggcgtttaaggagctgttgagggacaaggctgtcccctccaatgcctcg
tgggaacaggccatgaagatggtggtcactgacccccgttacagtgccttgcccaaactg
agtgagaaaaagcaggcattcaatgcctacaaggcgcagcgggagaaggaggagaaggaa
gaagcccggctgagggccaaggaggccaaacagaccctgcagcatttcctggagcagcat
gaacgcatgacctccaccacccgctaccggcgggcagagcagacctttggggaactggag
gtctgggctgtggtccctgagagggatcgaaaagaggtttatgatgatgtcctcttcttc
ctggccaagaaggagaaggaacaggccaagcagctccggcgccgcaacatccaggccctg
aagagcatcctggatgggatgagtagtgtcaacttccaaaccacatggtcccaggcccag
cagtacctcatggataaccccagctttgctcaggaccatcaattgcagaacatggacaag
gaagatgcactgatctgctttgaggagcacatccgagctttggagagggaggaggaggag
gaacgggagcgggcccggcttcgggagcgccgccagcaacgcaagaaccgggaggccttc
cagaccttcctggacgagctgcatgagacagggcagctgcactctatgtctacctggatg
gagctgtacccagcagtcagcactgatgtccgctttgccaacatgctgggccagccgggc
tccaccccgctggacttgttcaagttctatgtggaagaattgaaggcacgatttcatgat
gagaagaagatcattaaggacattcttaaggaccggggcttctgcgtggaagtgaacaca
gccttcgaagacttcgcccacgtcataagctttgacaagagggctgccgcgctggacgca
ggcaacatcaagctgaccttcaatagtctgctggagaaagcggaggcgcgggagcgggag
cgggagaaggaggaggcacgaaggatgcggcgcagggaagctgcctttcgaagcatgctg
aggcaggccgtgcctgccctggagctaggcacagcctgggaagaggtccgtgagcgcttt
gtgtgcgactcagcctttgagcagatcaccttggagtcggagcggatccggctcttccgg
gagttcctacaggtgctggagaccgaatgccagcacctccacaccaaaggccgaaagcac
ggcaggaagggcaagaagcaccatcgcaagcgctcccactcgccctcaggctctgagtca
gaagaggaggagctgcccccaccgtctctccggccccccaaacggaggcggcggaacccc
tcggagtcaggctctgagccctcttcctcacttgattccgttgaaagtgggggtgctgcc
cttggaggacggggatccccttcctcccaccttctccttggatcggatcacggccttcgg
aaagccaagaaaccaaaaaagaaaacaaagaagagaagacataagtcgaacagtcctgag
agtgagacagaccctgaggagaaagctggcaaggaaagtgatgagaaagaacaagaacag
gacaaggacagggagctccgacccacagagctcccgaaccgctccccaggcttcggaatc
aagaaggagaagacgggctgggacacgtcagaaagtgagctgagtgaaggcgagctggag
cggcggcggcggacactcctccagcagctggacgaccaccagtga
DBGET
integrated database retrieval system
