Carlito syrichta (Philippine tarsier): 103267796
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Entry
103267796 CDS
T07836
Symbol
DDX3X
Name
(RefSeq) ATP-dependent RNA helicase DDX3X isoform X1
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
csyr
Carlito syrichta (Philippine tarsier)
Pathway
csyr04622
RIG-I-like receptor signaling pathway
csyr05161
Hepatitis B
csyr05203
Viral carcinogenesis
Brite
KEGG Orthology (KO) [BR:
csyr00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
103267796 (DDX3X)
09160 Human Diseases
09161 Cancer: overview
05203 Viral carcinogenesis
103267796 (DDX3X)
09172 Infectious disease: viral
05161 Hepatitis B
103267796 (DDX3X)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csyr03019
]
103267796 (DDX3X)
03041 Spliceosome [BR:
csyr03041
]
103267796 (DDX3X)
03036 Chromosome and associated proteins [BR:
csyr03036
]
103267796 (DDX3X)
Enzymes [BR:
csyr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
103267796 (DDX3X)
Messenger RNA biogenesis [BR:
csyr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
103267796 (DDX3X)
mRNA cycle factors
Common to processing body (P body) and stress granule
103267796 (DDX3X)
Spliceosome [BR:
csyr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
103267796 (DDX3X)
Chromosome and associated proteins [BR:
csyr03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
103267796 (DDX3X)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
103267796
NCBI-ProteinID:
XP_008063566
Ensembl:
ENSTSYG00000003895
UniProt:
A0A1U7UCG3
LinkDB
All DBs
Position
Unknown
AA seq
662 aa
AA seq
DB search
MSHVAVENALGLDQQFAGLDLNSSDNQSGGSTASKGRYIPPHLRNREATKGFYDKDSSGW
SSSKDKDAYSSFGSRSDSRGKSSFFGDRGSGSRGRFDDRGRSDYDGIGSRGDRSGFGKFE
RGGNSRWCDKSDEDDWSKPLPPSERLEQELFSGGNTGINFEKYDDIPVEATGNNCPPHIE
SFSDVEMGEIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILS
QIYSDGPGEALRAMKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFSYRSRVRPCVV
YGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQ
IRRIVEQDTMPPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVGRVGSTSENITQKVV
WVEESDKRSFLLDLLNATGKDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDR
EEALHQFRSGKSPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGL
ATSFFNERNINITKDLLDLLVEAKQEVPSWLENMAYEHHYKGSSRGRSKSSRFSGGFGAR
DYRQSSGASSSSFSSSRTSSSRSGGGGHGSSRGFGGGGYGGFYNSDGYGGNYNSQGVDWW
GN
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgagtcatgtggcggtggaaaatgcgctcgggctggaccagcagtttgctggcctagac
ctgaactcttcagataatcagagtggaggaagtacagccagcaaagggcgctatatccct
cctcacttaagaaacagagaagctactaaaggattctacgataaagacagttcagggtgg
agttctagcaaagataaggatgcatacagcagttttggatcccgtagtgattcaagaggg
aagtctagtttcttcggtgatcgtggaagtggatcaagggggaggtttgatgatcgtgga
cggagtgattatgatggcattggcagccgtggtgacagaagtggctttggcaaatttgaa
cgtggtggaaacagtcgctggtgtgacaaatcagatgaagatgattggtcaaaaccactc
ccaccaagtgaacgcttggaacaggaactcttctctggaggcaacactgggattaacttt
gagaaatatgatgacattccagttgaggcaacaggcaacaactgtcctccacatattgaa
agcttcagtgatgttgagatgggagaaattatcatgggaaacattgaacttactcgttac
actcgcccgactccagtgcaaaagcatgctattcctattatcaaagagaaaagagacttg
atggcttgtgcccaaacagggtctggaaaaactgcagcatttcttttgcccatcttgagt
cagatttattcagatggtccaggcgaggctttgagggccatgaaggaaaatggaaggtat
gggcgccgcaaacaatacccaatctctttagtattagcaccaacgagagaattggcagta
cagatctatgaagaagccaggaaattttcgtaccgatctagagttcgtccatgtgtggtt
tatggtggtgctgatattggtcagcagattcgagacttagaacgtggctgccacttgtta
gtagctactccaggacgtctagtggatatgatggaaagaggaaagattggattagacttt
tgcaaatacttggtgttagatgaagctgatcggatgttggatatggggtttgaacctcaa
atacgtagaatagttgaacaagatactatgcctccaaagggtgtccgccacactatgatg
tttagtgctacttttcctaaggaaatacagatgcttgctcgtgatttcttggatgaatac
atctttttggctgtaggaagagttggctctacttctgagaacatcacacagaaagtagtt
tgggtggaagaatcagacaaacggtcattcttgcttgacctcctaaatgcaacaggcaag
gattcactgaccttagtgtttgtggagaccaaaaagggtgcagattctctggaagatttc
ctgtaccatgaaggatatgcttgtaccagtatccatggagaccgatctcagagagataga
gaagaggcccttcaccagttccgctcaggaaaaagcccaattctagtggctacagcagta
gcagcaagaggactggatatttcaaatgtgaaacatgttatcaattttgacttgccaagt
gatattgaagaatatgtacatcgcattggccgtacaggacgtgtaggaaaccttggccta
gccacctcattctttaacgagaggaacataaatattactaaggatttattggatcttctt
gttgaagctaaacaagaagtgccgtcctggttagaaaacatggcttatgaacaccactac
aagggtagcagtcgtggacgttctaagagcagtagatttagtggagggtttggtgccaga
gactaccgccaaagtagcggtgccagcagttccagcttcagcagcagccgcacaagcagc
agccgcagtggtggaggtggccacggcagcagcagaggattcggtggaggtggctatgga
ggcttttacaacagtgatggatatggaggaaattataactcccagggggttgactggtgg
ggtaactga
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