Carlito syrichta (Philippine tarsier): 103268209
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Entry
103268209 CDS
T07836
Symbol
EDC4
Name
(RefSeq) enhancer of mRNA-decapping protein 4
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
csyr
Carlito syrichta (Philippine tarsier)
Pathway
csyr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csyr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103268209 (EDC4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csyr03019
]
103268209 (EDC4)
Messenger RNA biogenesis [BR:
csyr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
103268209 (EDC4)
mRNA degradation factors
5'-3' decay
Decapping complex
103268209 (EDC4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
WD40_WDHD1_1st
Beta-prop_EDC4L
Beta-prop_TEP1_2nd
WD40_CDC20-Fz
WD40_Prp19
DUF445
Beta-prop_HPS5
WDR55
EIF3I
Motif
Other DBs
NCBI-GeneID:
103268209
NCBI-ProteinID:
XP_008063944
Ensembl:
ENSTSYG00000010741
UniProt:
A0A1U7TVB1
LinkDB
All DBs
Position
Unknown
AA seq
1398 aa
AA seq
DB search
MASCASIDIEDATQHLRDILKLDRPAGGPSADSPRPSNAYNGDLNGLLVPDPLCSGDGTS
TSKVNLRTMPPINLQEKQVICLSGDDSSTCIGILAKEVEIVASSDSSISSKARGSNKVKI
QPVAKYDWEQKYYYGNLIAVSNSFLAYAIRAANNGSAMVRVISVSTSERTLLKGFTGSVA
DLAFAHVNSPQLACLDEAGNLFVWRLALVNGKIQEEILVHIRQPEGTPLNHFRRIIWCPF
IPEESEDCCEESSPTVALLHEDRAEVWDLDMLRSSHSTWPVDVSQIKQGFIVVKGHSTCL
SEGALSPDGTVLATASHDGYVKFWQIYIEGQDEPRCLHEWKPHDGRPLSCLLFCDNHKKQ
DPEVPFWRFLITGADQNRELKMWCTVSWTCLQTIRFSPDIFSSVSVPPSLKVCLDLSAEY
LILSDVQRKVLYVMELLQNQEEGRACFSSISEFLLTHPVLSFGIQVVSRCRLRHTEVLPA
EEENDSLGADGTHGAGAMESAAGVLIKLFCVHTKALQDVQIRFQPQLNPDVVTPLPTHTA
HEDFAFGESRSELGSESLGSAAHGSQPDLRRIVELPAPADFLSLSSETKPKLMTPDAFMT
PSTSLQQITASPGSSSSSSSNSSSSSLTAVSAMSSTSTVDPPLPRPPEELTLSPKLQLDG
SLTMSSSSSLQASPRSLLPGLLSGPADKLTPKVPGQVPTAASALSLELQEVEPLGLPQAS
PSRTRSPDVISSASTALSQDIPEIASEALSRGFGSSAPEVLEPDSMASAASALHLLSPRP
RPGPELGSQLGLDGGPGDGDRHSAPSLLEAALTQEAVTPDSQVWPTAPDITRETCSTLAE
SPRNGLQEKHKSLAFHRPPYHLLQQHDSQDASAEQSDHDDEVASLASASVGFGTKVPTPR
LPTKDWKTKGSPRTSPKLKRKSKKDDGDSAVGSRLTEHQVAELPEDWPALIWHQQRELAE
LRHSQEELLQRLCTQLEGLQNTVMGHVERALETRHEQEQRRLERALAEGQQRGGQLQEQL
TQQLSQALSSAVAGRLERSIRDEIKKTVPPCVSRSLEPVAGQLSNSVATKLTAVEGSMKE
NISKLLKSKNLTDAIARAAADTLQGPMQAAYREAFQSVVLPAFEKSCQAMFQQINDSFRL
GTQEYLQQLENHMKSRKAREQEAREPVLAQLRGLVGTLQSATEQMAATVSSSVRAEVQHQ
LHVAVGSLQESILAQVQRIVKGEVSVALKEQQAAVTSSIMQAMRSAAGTPVPSAHLDCQA
QQAHILQLLQQGHLNQAFQQALTAADLNLVLYVCETVDPAQVFGQPPCPLSQPVLLSLIQ
QLASDLGTRTDLKLSYLEEAVMHLDHSDPITRDHMGSVMAQVRQKLFQFLQAEPHNSLGK
AARRLNLMLHGLVTPSLP
NT seq
4197 nt
NT seq
+upstream
nt +downstream
nt
atggcctcctgcgcgagcatcgacatcgaggacgccacgcagcacctgcgggacatcctt
aagctggaccggcccgcggggggccccagtgcagacagcccacggccatccaatgcctac
aatggggatctcaatgggctcctggtcccagacccactctgctcaggtgatggtacctca
acaagcaaggtcaatctccggaccatgccacccattaacctgcaggagaagcaggtcatc
tgcctctcaggagatgacagctctacctgcattgggattttggccaaggaggtggagatt
gtggccagcagtgactctagcatttcgagcaaggcccgggggagcaacaaggtgaaaatc
cagcctgtcgccaagtatgattgggagcagaagtactactatggcaacctgattgctgtg
tctaactctttcttggcctacgccattcgggctgccaacaatggctcagccatggtgcgg
gtgatcagtgtcagcacatcggagcggaccctgctcaagggcttcacaggcagtgtggcc
gatctggcctttgcacacgtcaattctccacagctggcctgcctggatgaggcaggcaac
ctgtttgtgtggcgtttggctctggttaatggcaaaattcaagaagagatcttggtccat
atccggcagccagagggtacgccactgaaccacttccgcaggatcatatggtgccccttc
atccctgaggagagtgaggactgctgtgaggagagcagcccaacagtggctctgctgcat
gaagaccgggctgaggtatgggacctggacatgctccgctccagccatagcacctggcct
gtggatgtcagccaaatcaagcagggcttcattgtggtaaaaggccacagtacatgccta
agtgaaggagctctctcccctgatgggactgtcttggctactgcgagccatgatggctat
gtcaagttctggcagatctacattgaggggcaggatgaaccaaggtgtctgcacgagtgg
aagcctcatgatgggcgacccctctcctgcctcctattctgtgacaaccataagaaacag
gaccctgaggtccctttctggaggttcctcattactggcgctgaccaaaatcgggagcta
aagatgtggtgcacagtgtcctggacctgcctgcagaccattcgcttctccccagatatc
ttcagctcagtgagtgtgcctcccagcctcaaggtttgcctggacctctcagcagaatac
ttgattctcagtgatgtgcagcggaaggtcctctatgtgatggaactgctgcagaaccag
gaggagggccgtgcctgcttcagctccatctcagagttcctactcacccaccctgtgctg
agctttggtatccaggttgtgagtcgctgccggctgcggcacactgaggtgcttcctgct
gaggaggagaatgacagcctgggtgctgatggtacccatggagccggtgccatggagtct
gcagctggtgtgctcatcaagctcttttgtgtgcatactaaggcactgcaagatgtacag
atccgctttcagccacagctgaatcctgatgtagtgaccccgctccccacccacactgcc
catgaggactttgcatttggagagtctcggtctgaactaggctctgagagcctggggtca
gctgctcatggctcccagcctgacctccgacgaattgtggaactgcctgcacctgccgac
ttcctcagtctgagcagtgagaccaagcccaagttgatgacacctgacgccttcatgaca
cccagtacctccctgcaacagatcactgcatcccctggcagtagtagcagcagcagcagt
aatagcagcagcagctctcttacagctgtgtctgccatgagcagcacctcaacagtggac
ccccccttgcccaggccacctgaggagctgaccttgagccccaagctgcaactggatggc
agtctgacaatgagcagcagtagcagcctgcaagcaagcccacgaagcctcctgcccggc
ctgctctcaggcccagccgacaaattgactcctaaggtgccggggcaggtgcctactgct
gcctccgcactatctctagagctgcaggaagtggagcccctgggactaccccaggcctcc
cccagccgcacccgctcccctgatgttatctcttcagcttccactgccctgtcccaggac
atccctgagattgcatctgaggccctgtctcgtggctttggctcttctgcaccagaagtc
cttgagccagacagtatggcttcagctgcctcagcactacacctgctatccccacggccc
cgaccagggcccgaacttggttcccagcttggcctagatggaggccctggggatggagat
cggcacagtgccccctctctcctggaggcagccttgacccaggaggctgtgacccctgac
agtcaggtttggcctacagcacctgacattactcgtgagacgtgtagcaccctggcagag
agtcccaggaatggcctccaagaaaagcacaagagcctggctttccaccgaccaccttat
cacctactgcagcaacacgacagtcaggatgccagtgctgagcaaagtgaccacgatgat
gaggtggccagccttgcctctgcttcagtaggctttggcaccaaagttcctactccacgg
ctacctaccaaggactggaagaccaagggatcccctcggacctcgcccaagctcaagagg
aaaagcaagaaggatgacggggattcagctgtgggatcccgactcacagagcaccaggtg
gcagagctccctgaggactggccagcattaatttggcatcagcagagagagctggcagag
cttcggcacagccaagaagagctgctgcagcgtctgtgtacccaacttgagggcctgcag
aacaccgttatgggccatgtagaacgtgccctcgagacccggcatgagcaggaacagcgg
cggctggagcgagcactggctgaggggcagcagcggggtgggcagctgcaggagcagctg
acacagcaactgtcccaagcactatcttcagctgtagctgggcggctagagcgcagcata
cgggatgagatcaagaagacggtccctccatgtgtctccaggagtctggaacctgtggca
ggccaactgagcaactcagtggccaccaagcttacagctgtggagggcagcatgaaagag
aacatatctaagctgctcaagtccaagaacttgactgatgccatcgcccgagcagctgca
gacacattacaggggccaatgcaggctgcctaccgtgaagccttccagagtgtggtgctg
ccagcctttgagaaaagctgccaggccatgttccagcagatcaatgatagtttccgcctc
ggcacacaggaatacttgcagcagctagaaaaccacatgaagagccggaaggcacgggaa
caggaggcaagggagcctgtgctggctcagcttcggggcctggtcggcacactgcagagt
gccactgagcagatggcagccactgtatccagcagtgttcgggctgaggtgcagcaccag
ctgcatgtggctgtgggcagcctgcaagagtcaattttagcacaggtacagcgcattgtt
aagggtgaggtgagtgtggcgctcaaggagcagcaggctgctgttacctccagcatcatg
caggccatgcgctcagctgctggcacacctgtcccctctgcccacctcgactgccaggcc
cagcaagcccatatcctgcagctgctccagcagggccacctcaatcaggccttccagcag
gcactgacagccgctgacctgaacctggtgctttatgtgtgtgaaactgtggacccagcc
caagtttttgggcagccaccctgccccctctcccagcctgtgctcctttccctcatccag
cagctggcgtctgaccttggcacccgaactgacctcaagctcagctacctggaagaggcc
gtaatgcacttggaccacagtgaccccatcactcgggaccacatgggctccgttatggcc
caggtgcgccagaagctctttcagttcctgcaggctgagccacacaactcacttggcaaa
gcggcccggcgtctcaacctcatgctgcatggcctcgtgacccccagcctcccttag
DBGET
integrated database retrieval system
