Carlito syrichta (Philippine tarsier): 103269887
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Entry
103269887 CDS
T07836
Symbol
PCDH1
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin-1
KO
K16498
protocadherin delta 1
Organism
csyr
Carlito syrichta (Philippine tarsier)
Pathway
csyr03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
csyr00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
103269887 (PCDH1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
csyr01009
]
103269887 (PCDH1)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
csyr04515
]
103269887 (PCDH1)
Protein phosphatases and associated proteins [BR:
csyr01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
103269887 (PCDH1)
Cell adhesion molecules [BR:
csyr04515
]
Cadherins
Protocadherins
103269887 (PCDH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
103269887
NCBI-ProteinID:
XP_008065627
Ensembl:
ENSTSYG00000028908
UniProt:
A0A1U7UJZ2
LinkDB
All DBs
Position
Unknown
AA seq
1215 aa
AA seq
DB search
MGPLRLSPGPRGQRLLLPPSLLALLLLLAPSPGQATRVVYKVPEEQPPNTLIGSLAADYG
FPDVGHLYKLEVGAPYLRVDGKTGDIFTTETSIDREGLHECQNQLPGEPCILEFEVSITD
LVQNGSPRLLEGQIEVQDINDNTPNFASPVITLAIPENTNIGSLFPIPLASDRDAGPNGV
ASYELQAGPEAQELFGLQVAEDQEEKQPQLIVMGNLDRERWDSYDLTIKVQDGGSPPRAS
SALLRVTVLDTNDNAPKFERPSYEAELSENSPIGHSVIQVKANDSDQGANAEIDYTFHQA
PEIVKHLLRLDKNTGLITVQGPVDRENLSTLRFSVLAKDRGANPKSARAQVVVTVKDMND
NAPTIEIRGIGLVTHQDGMANISEDVTEETAVALVQVSDRDEGENAAVTCVVAGDVPFQL
RQASETGSDSKKKYFLQTTTPLDYEKVKDYTIEIVAVDSGNPPLSSTNSLKVQVVDVNDN
APVFTQSVTEVAFPENNNPGEVVAEVTASDADSGSNAELVYSLEPEPAAKGLFTISPETG
EIRVKTSLDREQRDSYELKVVAADRGSPSLQGTATVLVNVLDCNDNDPKFMLSGYNFSVM
ENMPALSPVGMVTVIDGDKGENARVQLSVEQDNGDFVIQNGTGTILSSLSFDREQQSTYT
FQLKAVDGGIPPRSAYVGVTINVLDENDNAPFITTPSNTSHRLLTPQTRLGETVSQVTAE
DIDSGVNAELTYSIAGGNPYGLFQIGSHSGAITLEKEIERRHHGLHRLVVKVSDRGKPPR
YGTALVHLYVNETLTNRTLLETLLGHSLDTPLDIDIAGDPEYERSKQRGNILFGVVAGVV
AVALLIALAVLVRYCRQREAKSGYQAGKKETKDLYAPKPSGKASKGNKSKGKKSKSPKPV
KPVEDEDEAGLQKSLKFNLMSDAPGDSPRIPLPLTXPPGSPALGRHYRSNSPLPSIQLQP
QSPSASKKHQVVQDLPPANTFVGTGDTTSTGSEQYSDYSYRTNPPKYPSKQLPHRRVTFS
ATSQAQELQDPSQHSYYDSGLEESETPSSKSSSGPRLGPLALPEDHYERTTPDGSIGEME
HPENDLRPLPDVAMTGTCTRECSEFGHSDTCWMPGQSSPSRRTKSSALKLSTFVPYQDRG
GQEPAGAGSPSPPEDRNTKTAPVRLLPSYSAFSHSSHDSCKDSATLEEIPLTQTSDFPPA
ATPASAQTAKREIYL
NT seq
3648 nt
NT seq
+upstream
nt +downstream
nt
atggggcccctgaggctcagcccaggaccccgggggcagcggttgctgctgcccccttcg
ctgctggcgctgctgctcctgctggctccatccccgggccaggccacacgggtcgtgtac
aaggtgccggaggagcagccacccaacaccctcatcgggagccttgccgccgactacggc
ttccctgacgtgggccatctgtacaagctagaggtaggcgctccctaccttcgcgtggat
ggcaagacgggtgacattttcaccaccgagacctccattgaccgcgaggggctgcatgag
tgccagaaccagctccctggtgagccctgcatcctggagtttgaggtgtctatcacagac
ctcgtgcagaacggcagtccccggctgctggagggccagatcgaggtgcaggacatcaac
gacaacacaccaaacttcgcctcacccgtcatcactctggccatccccgagaacaccaac
atcggctctctcttccccatcccgctggcttcggaccgtgatgcaggccccaacggagtg
gcgtcctacgagctgcaggctgggcccgaggcccaggagctctttggactgcaggtggcg
gaggaccaggaggagaagcagccccagctgattgtgatgggcaacctggaccgtgagcgc
tgggactcctacgacctcaccatcaaggtgcaggatggcggcagccccccacgagccagc
agcgccctgctgcgtgtcaccgtgctcgacaccaatgacaacgcccccaagttcgagcgg
ccctcctatgaggctgaactgtctgagaatagccccataggccactctgtcatccaggtg
aaggccaatgactcggaccaaggcgccaatgcagagatcgactacacattccaccaggcg
cccgagatcgtaaagcatcttctgcgactggacaagaacactggacttatcaccgttcag
ggccctgtggatcgtgagaacttaagcaccctgcgcttctcagtgctcgccaaggaccgg
ggtgccaatcccaagagtgcccgtgcccaggtggttgtgactgtgaaggatatgaatgac
aacgcccccaccatcgagatccggggcataggactagtgacccatcaagacgggatggcc
aacatctcggaggatgtgacagaggagacagctgtggccctggtgcaggtatccgaccga
gacgagggagagaatgcagctgttacctgtgtggttgcgggagatgtgccctttcagcta
cgccaagccagcgagacgggcagcgacagcaagaagaagtactttctgcagaccaccacc
ccacttgactatgagaaggtcaaagactataccatcgagattgtggctgtggactctggc
aaccccccgctctccagcaccaactccctcaaggtgcaggtggtggacgtcaacgacaac
gcccctgtgttcacccagagcgtcactgaggtcgccttcccagaaaacaacaaccctggg
gaagtggtcgctgaggtcactgccagtgatgccgactctggctccaatgccgagctggtg
tactctttggagcctgagccagcagccaagggcctcttcaccatctcacctgagactgga
gagatccgggtaaagacatccctggatcgggagcagcgggacagctacgagttgaaggtg
gtggcagctgaccggggcagccctagcctccagggcacagccactgtcctcgtcaatgtg
ctagactgcaatgacaatgaccccaaatttatgctgagtggctacaacttctctgtgatg
gagaacatgcccgcgctgagtccagtgggcatggtgactgtcattgatggggacaagggg
gagaatgcccgggtgcaactctctgtggaacaggacaatggtgactttgttatccagaat
ggcacaggcaccatcctctccagcctgagttttgatcgagagcaacagagtacctacacc
ttccagctgaaggcggtggacggtggcatcccacctcgctcagcttacgttggtgtcacc
atcaatgtgctggatgagaatgacaatgcgccctttatcaccacaccctccaatacctcc
caccggctgctgacccctcaaacgcgccttggcgaaacggtcagccaggtgacggctgag
gacattgactctggtgtcaatgctgagctgacctacagcatcgctggcggcaacccttac
ggacttttccagattgggtcgcactcaggtgccatcaccctggagaaggagattgagcgg
cgccaccacgggctccaccgcctggtggtgaaggtcagtgaccgtggcaagcctccacgc
tatggcacggccttggtccacctctatgtcaatgagactctgaccaaccgcacgctgctg
gagaccctcctgggccacagcctggacacaccactggatattgacattgccggggatcca
gaatatgaacgctccaagcagcgtggcaacatcctctttggcgtggtggccggcgtggtg
gccgtggccttgctcatcgccctggcggtcctcgtgcgttactgccggcagcgggaggcc
aagagcggctaccaggctgggaagaaggagaccaaagacctgtatgcccccaagcccagc
ggcaaagcctccaagggaaacaagagcaagggcaagaagagcaagtccccgaagcccgtg
aagcccgtggaggacgaggacgaggctggtctgcagaagtccctcaagttcaacctgatg
agtgatgcccctggcgacagtccccgcattcccctgcccctcactncccccccgggcagc
ccagccctgggccgccactaccgctccaactccccgctgccttccatccagctgcagccc
cagtcaccctcggcctccaagaagcaccaggtggtgcaggacctgccacctgcaaacaca
ttcgtgggcaccggggacaccacatccacgggctctgagcagtactccgactacagctac
cgtaccaacccccccaaataccccagcaagcagttacctcaccgccgtgtcaccttctcg
gccaccagccaggcccaggagctgcaggacccatcccagcacagttactatgacagtggc
ctggaggagtctgagacaccatccagcaagtcatcctcggggcctcggctcggtcccttg
gccctgcccgaggaccactacgagcgcaccacccctgatggcagcattggggagatggag
caccctgagaacgaccttcgccctttacctgatgtcgccatgacgggcacgtgtacccgg
gagtgcagtgagtttggccactctgacacatgctggatgcctggccagtcgtctcccagc
cgccggaccaagagcagcgccctcaaactctccaccttcgtgccttaccaggaccgagga
gggcaggagcctgcgggcgccggcagccccagccccccggaagaccggaacaccaaaacg
gcccccgtgcgcctcctgccctcctacagtgccttctcccacagtagccatgattcctgc
aaggactcagccaccttggaggaaattcccctgacccagacctcggacttcccacccgca
gccacaccggcatctgcccagacggccaagcgcgagatctacctgtga
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