Carlito syrichta (Philippine tarsier): 103271400
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Entry
103271400 CDS
T07836
Symbol
SMARCA4
Name
(RefSeq) transcription activator BRG1 isoform X3
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
csyr
Carlito syrichta (Philippine tarsier)
Pathway
csyr03082
ATP-dependent chromatin remodeling
csyr04714
Thermogenesis
csyr05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
csyr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
103271400 (SMARCA4)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
103271400 (SMARCA4)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
103271400 (SMARCA4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csyr03021
]
103271400 (SMARCA4)
03036 Chromosome and associated proteins [BR:
csyr03036
]
103271400 (SMARCA4)
Transcription machinery [BR:
csyr03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
103271400 (SMARCA4)
Chromosome and associated proteins [BR:
csyr03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
103271400 (SMARCA4)
Chromatin remodeling factors
BAF complex
103271400 (SMARCA4)
PBAF complex
103271400 (SMARCA4)
GBAF(ncBAF) complex
103271400 (SMARCA4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
DUF2009
Htt_C-HEAT
Motif
Other DBs
NCBI-GeneID:
103271400
NCBI-ProteinID:
XP_008067068
Ensembl:
ENSTSYG00000012966
UniProt:
A0A1U7UED7
LinkDB
All DBs
Position
Unknown
AA seq
1616 aa
AA seq
DB search
MSTPDPPLGGTPRPGPSPGPGPSPGAMLGPSPGPSPGSAHSMMGPSPGPPSAGHPIPTQG
PGGYPQDNMHQMHKPMESIHEKGLSDDPRYSQMKGMGMRSGGHTGMGPPPSPMDQHSQGY
PSPLGGSEHASSPVPASGPSSGPQMSSGPGGASLDGADPQALGQQNRGPTPFNQNQLHQL
RAQIMAYKMLARGQPLPDHLQMAVQGKRPMPGMQQQMPTLPPPSVSATGPGPGPGPGPGP
GPGPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTST
PQKLIPPQPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQPAPMVPLHQKQSRITPIQKP
RGLDPVEILQEREYRLQARIAHRIQELENLPGSLAGDLRTKATIELKALRLLNFQRQLRQ
EVVVCMRRDTALETALNAKAYKRSKRQSLREARITEKLEKQQKIEQERKRRQKHQEYLNS
ILQHAKDFKEYHRSVTGKIQKLTKAVATYHANTEREQKKENERIEKERMRRLMAEDEEGY
RKLIDQKKDKRLAYLLQQTDEYVANLTELVRQHKAAQVAKEKKKKKKKKKAENTEGQTPA
IGPDGEPLDETSQMSDLPVKVIHVESGKILTGTDAPKAGQLEAWLEMNPGYEVAPRSDSE
ESGSEEEEEEEEEEQPQPTQPPTLPVEEKKKIPDPDSDDVSEVDARHIIENAKQDVDDEY
GVSQALARGLQSYYAVAHAVTERVDKQSALMVNGVLKQYQIKGLEWLVSLYNNNLNGILA
DEMGLGKTIQTIALITYLMEHKRINGPFLIIVPLSTLSNWAYEFDKWAPSVVKVSYKGSP
AARRAFVPQLRSGKFNVLLTTYEYIIKDKHILAKIRWKYMIVDEGHRMKNHHCKLTQVLN
THYVAPRRLLLTGTPLQNKLPELWALLNFLLPTIFKSCSTFEQWFNAPFAMTGEKVDLNE
EETILIIRRLHKVLRPFLLRRLKKEVEAQLPEKVEYVIKCDMSALQRVLYRHMQAKGVLL
TDGSEKDKKGKGGTKTLMNTIMQLRKICNHPYMFQHIEESFSEHLGFTGGIVQGLDLYRA
SGKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGML
LKTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNE
VRVLRLCTVNSVEEKILAAAKYKLNVDQKVIQAGMFDQKSSSHERRAFLQAILEHEEQDE
EEDEVPDDETVNQMIARHEEEFDLFMRMDLDRRREEARNPKRKPRLMEEDELPSWIIKDD
AEVERLTCEEEEEKMFGRGSRHRKEVDYSDSLTEKQWLKAIEEGTLEEIEEEVRQKKSSR
KRKRDSDAGSSTPTTSTRSRDKDDESKKQKKRGRPPAEKLSPNPPNLTKKMKKIVDAVIK
YKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLNDLEKDVML
LCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEDDSEGEESEEEEEGEEEGSESESR
SVKVKIKLGRKEKAQDRLKGGRRRPSRGSRAKPVVSDDDSEEEQDEDRSGSGSEED
NT seq
4851 nt
NT seq
+upstream
nt +downstream
nt
atgtccactccagatccacccctgggcggaactcctcggccgggcccttccccgggccca
ggcccctcgcctggagccatgctgggccctagccctggtccctcgccaggctctgcccac
agcatgatggggcccagcccggggccaccctctgcaggacatcccatcccgacccagggg
cctggaggataccctcaggacaacatgcaccagatgcacaagccgatggagtccatacat
gagaaggggctgtcagatgacccacgctacagccagatgaaggggatgggcatgcggtca
gggggccacaccggcatgggtcccccgcccagccccatggatcagcactcccaaggttac
ccctcacccctgggtggctctgagcatgcctccagtccggttccagccagtggcccgtcc
tcgggtccccagatgtcgtctgggccaggaggggcctcactggatggtgccgacccccag
gccctggggcagcagaaccggggcccgaccccattcaaccagaaccagctgcaccagctc
cgagctcagatcatggcctacaagatgctggcacgggggcagccgctgcctgaccacctg
cagatggccgtgcagggaaagcggcccatgcctggcatgcagcagcagatgccaacgcta
cctccgccctcggtgtctgcaacaggacctgggcctggccctggccccggccctggccca
ggcccaggcccaggcccagcacctcccaattacagcagaccccatggtatgggagggccc
aacatgcctcccccaggaccctcaggtgtgccccctgggatgccaggccagccccccgga
ggacctcccaaaccctggcctgaaggacccatggcgaatgctgctgcccccacaagcacc
cctcagaagctgatccccccgcagccgacaggccgcccctcacccgcgccccccgccgtc
ccgcctgctgcctcgcctgtgatgccgccgcagacacagtccccagggcagccagcccag
cccgcccccatggttcccctgcaccagaagcagagccgcatcacccccatccagaagccc
cggggccttgacccggtggagatcctgcaagagcgggaatacaggctgcaggcccgcatc
gcacaccgaattcaggaacttgaaaacctccctgggtccctggctggggatttgcgaacc
aaagcgaccattgagctcaaggccctcaggctgctgaacttccagaggcagctgcgccag
gaggtggtggtgtgcatgcggagggatacggccctcgagactgctcttaatgccaaagcc
tacaagcgcagcaagcgacagtccctgcgtgaggcacgtatcaccgagaagctggagaag
cagcagaagattgagcaggagcgcaagcgccggcagaagcaccaggaatacctcaatagc
attcttcagcatgctaaggatttcaaagaatatcacagatcggtgacaggcaaaatccag
aaactcaccaaggcagtggccacataccatgccaacacagagcgggaacagaagaaggag
aatgaacgaattgagaaggagagaatgcggaggctcatggctgaggatgaggaagggtac
cgtaaactcatcgaccagaagaaggacaagcgcctggcctacctcctgcagcagacagat
gagtatgtggccaacctcactgagctggtgcggcagcacaaggccgcccaggtcgccaag
gagaaaaagaagaaaaagaaaaagaagaaggcagaaaacacggagggacagacgcctgcc
atcgggccagatggcgagcctctggacgagaccagccagatgagtgacctccctgtgaaa
gtgatccatgtggagagtgggaagatcctcacgggcacggatgcccccaaggcaggacag
ctggaggcctggctcgagatgaacccaggatatgaagtagctccacgatctgacagtgaa
gaaagtggctccgaagaagaggaagaggaggaagaggaggagcagccacagcccacgcag
cctcccaccctgcccgtggaagaaaagaagaagattccagatccagacagtgatgatgtc
tctgaggtggatgcacggcacatcattgagaatgccaagcaagatgtggatgatgagtac
ggcgtttcccaggccctcgcacgtggcctgcagtcctactacgctgtggcccacgctgtc
actgagagagtggacaagcagtcagcactgatggtcaacggtgtcctcaagcagtaccag
atcaaaggcctggagtggctggtgtccctgtacaacaacaacctgaatggcatcctggct
gatgagatgggcctgggcaagaccatccagaccattgcgctcatcacgtatctcatggag
cacaagcgcatcaacgggccgttcctcatcatcgtgcctctctcaacgctgtcaaactgg
gcatacgagttcgataagtgggccccttcagtggtgaaggtgtcctacaagggctccccg
gcggcaagacgggcctttgtcccccaactgcggagcgggaagttcaatgtcctactgacc
acgtatgagtacatcatcaaggacaagcatatcctcgccaagattcgctggaagtacatg
atcgtagacgagggccaccgcatgaagaaccatcactgcaaactgacacaggtgctcaac
acgcactacgttgccccgcgccgcttgcttctgacaggcacgccactgcagaacaagctg
cctgagctctgggcgctgcttaacttcctgctgcccaccatcttcaagagctgcagcacc
ttcgagcagtggttcaacgcaccctttgccatgaccggggagaaggtggacctgaatgag
gaggaaaccattctcatcatccggcgtctccacaaagtgttgcggccctttctgctccgg
cggctgaagaaggaagtcgaggcacagttgcctgagaaggtggagtacgtcatcaagtgc
gacatgtctgcactgcagcgcgtgctctaccggcacatgcaggccaagggcgtgctgctg
acagatggctctgagaaggacaagaagggcaaaggtggcaccaagaccctgatgaacacc
atcatgcagctgagaaagatctgcaaccacccgtacatgttccagcacattgaggagtcc
ttttctgagcacttggggttcactggtggcatcgtccaaggactggacttgtaccgagcc
tcaggtaaatttgagcttctcgatagaattcttcccaaactccgagccaccaaccataaa
gtgctgctgttctgccagatgacctccctcatgaccatcatggaagattactttgcatat
cgtggctttaaatacctcaggctcgatggaaccacgaaggcagaagaccggggcatgctg
ctgaagaccttcaatgagcccggctccgagtacttcatcttcctgctcagcacgcgggcc
ggggggctcgggctgaacctccagtctgctgacactgtgatcatcttcgacagcgattgg
aaccctcaccaggacctgcaggcacaggaccgagcccaccgcatcgggcagcagaacgag
gtgcgtgtgcttcgcctctgcacagtcaacagtgtggaggagaagatcctggctgctgcc
aagtacaagctcaacgtggaccagaaggtgatccaggctggcatgtttgaccagaagtcc
tccagccacgagcggcgcgccttcctgcaggccatcctggagcatgaggaacaggacgag
gaggaagatgaggtacctgatgatgagaccgtcaaccagatgatcgcgcggcatgaggag
gagttcgacctattcatgcgcatggacctagaccgcaggcgtgaggaggcccgcaacccc
aagcggaagccacgcctgatggaggaggatgagctgccctcatggatcatcaaggacgat
gcggaggtggagcggctgacttgtgaggaggaggaggagaagatgtttggccgtggctcc
cgccaccgcaaggaggtggactacagcgactcgctgacggagaagcagtggctcaaggcc
atcgaggagggcacgttggaggagatcgaagaggaggtccggcagaagaaatcatcacgg
aagcgcaagcgggacagtgacgccggctcctccacgccgactaccagcacacgcagccgc
gacaaggacgacgagagcaagaagcagaagaagcgtgggcggcctcctgctgagaaactg
tccccaaacccgcccaacctcaccaagaagatgaagaagattgtggatgccgtgatcaag
tacaaggacagcagcagtggacgtcagctcagtgaggtcttcatccagctgccctcgcgc
aaggagctgcccgagtactacgagctcatccgaaagcccgtggacttcaagaagatcaag
gagcgcattcgcaaccacaagtaccgcagcctcaacgacctggagaaggatgtcatgctg
ctgtgccagaacgcgcaaaccttcaacctggagggctccctgatctacgaggactccatt
gtgctacagtcggtgttcactagcgtgcggcagaagatagagaaggaggatgacagcgaa
ggcgaggaaagcgaagaggaggaggagggcgaggaggagggctctgagtctgagtcacgc
tcagtcaaggtgaagatcaaactcggccgcaaggagaaggcacaggaccggctgaagggg
ggccggcggcggccaagccgggggtcccgggccaagccagtcgtgagtgacgacgacagt
gaggaggagcaggacgaggaccgctcaggaagtggcagtgaggaagactga
DBGET
integrated database retrieval system
