Carlito syrichta (Philippine tarsier): 103272141 Help Entry 103272141         CDS       T07836                                  Symbol SPG11 Name (RefSeq) spatacsin isoform X1   KO K19026   spatacsin Organism csyr  Carlito syrichta (Philippine tarsier) Pathway csyr05014   Amyotrophic lateral sclerosis csyr05022   Pathways of neurodegeneration - multiple diseases Brite KEGG Orthology (KO) [BR:csyr00001]  09160 Human Diseases   09164 Neurodegenerative disease    05014 Amyotrophic lateral sclerosis     103272141 (SPG11)    05022 Pathways of neurodegeneration - multiple diseases     103272141 (SPG11)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:csyr03400]     103272141 (SPG11) DNA repair and recombination proteins [BR:csyr03400]  Eukaryotic type   DSBR (double strand breaks repair)    HR (homologous recombination)     Other HR factors      103272141 (SPG11) BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  Spatacsin_C Ntox4 Motif Other DBs NCBI-GeneID:  103272141 NCBI-ProteinID:  XP_008067819 Ensembl:  ENSTSYG00000007918 UniProt:  A0A1U7U6C9 LinkDB All DBs Position Unknown AA seq 2441 aa AA seqDB search MAAEEGAGSGASAGGSCRAAAMGRVLPMLLVPVPAEATGQLGSRAQLHREQEALGSLTAA GSLQVLSLAPGGRSGGGCCLEGPFRHFVWENSYDSSTPTDKPKLLALSENYELLIYEFNL KDGRCDATILYSINGKILQKLIEDQDISISLLSLRILSFHNNTSLLFINKYIILHIVFPE RDAEIRVLNCFTLPLPAQAVDIITDAQVCRGILFVLSNSGWIYIFDIVDGTYVAHVDLAL HQEEMCNEQQQEPAKVSSFTSLKVSHDLDVVVIISSSNSAVALNLNLYFRQYPGHLLYKR TPEDLPIQGPKGIDEDDPVNSDYNMKLTKFSFQIDRSWKAQLSSLNETIKSSKREVSCFA PWFQDILHLESPESGNHSTSVQSRNLITQDIMHGQYNFPQKDHAKTSDPGRSWKIIHFIE QEEPIELKCVSVTGFTALFTWTMEKTGCTIVLWDLETQGMQCFSLGKKCIPVDSSGDQQL CLVLTENGLSLILFGLTQEEFLNRLMIHGSASTVDSLCHLNGWGRCSIPIHALEAGIENR QLDTVDFFLKSKENLFNPSSKSSVPDQFDHFSSHLYLRNVEELTPALDLLSSAVKESDSE AQSKHFSEQLLNLTLSFLNKQIKELFMHAEELDEHLQKGVNILTSYINELRTFMIKFPWK LTDAIDKYDVNENIPKVKERDIWEKLSFEDVIADAILNNKIPEAQTFFRVNSHSAQRLEE LIGIGLDLVFDNLKKNNIKEASELLKNMGFDVKDQLLKICFYTTDKNIRDFLVEILKEKN YFSEKEKRTIDFVHQVEKFYLGHFQENIQIQSLPRYWIKEQDSFKHKAVLDSFLKYDCKD EFNKQDRRIVLNWALWWDQLTQESILLSRISPEEYKLYSPEALWRHLTAHHDWLNIILWI EEFQTQDSYASLQPNRWPPLTVDVINQNTCCNNYMRNEILDKLARNGIFLASELEDFECF LLRLSRVGGVMQDNLLVQNYKTKEGWNFHSHFILYCLEHSLQHLLYVYLDCYKLSPENCP FLEKKELYEAHPWFEFLVQCRQVSSNLTDPKLIFQASLANAQILIPTNQASVSSMLLEGH TLLALATTMYAPGGVNQVVQNEENENCLKRVDPQLLKMALTPYPKLKTALFPQYTAPSVL PPDITLYHLIQSLSPFDPSRLFGWQSANTLAIGDASSHVPHFSSPDLVNKYAIVERLNFA YYLHHGRPSFAFGTFLVQELIKSKTPKQLIQQVGNEAYVLGLSSFHIPSIGAACVCFLEL LGLDSLKLRVDMKVANIVLNYKCRNEDVQYSFIRESLAEKVSKLADGEKATIEELLILLE EGIWNNIQQQDIKRLSSESSSQWALVVQFCRLHNMKLSMSYLRECAKANDWLQFIIHSQL HNYDPEEVKSLIQYFSPVLQDHLRLAFENLPSVSTSKMDCDQVCNKSPQELQRNKEMTDF FEILLQCSEEPDSWHWLLAEAVKQQAPILSVLASCLQDACAIPCLCVWIITSVEDGVAAE AMRHIQGSIEGHTWDLEDLSVIWRTLLTRQKSKTLIRGFYLFFKDFPLLLMMEMYELSMF FKNYKEAEAKLLEFQKSLETLDMATTRVHPAIPAMWIKDQVCFLLKLMLRQCKTQYELGK LLQLFVGVEHLFSDGPDVKKLCALSQILKDTSIAINHIIITNYSIENFQHECRSILERLQ IDGHFALARRVAELAELPVDNLVIEEITQEMQTLKHTEQWSLKQTRIDFWKKCHESFKKN SISSKAASAFFSTQALVACEHPTRWSSIEERHLLLTLAGHWLAQDDMVPLDKLEELEKEI WLCRITQHTLGGNQEEIEPRFSRQISTSGELSFDSLASEFSFSKLAALNTSKYLEINDFP SKETCENRLDWKEQESLNFLIGLLLDDGCVHEASRACRYFHFYNRDVALVLHCRALASGE ASVDDLHPEIRAVLQSAELLEEEEPSIPLRKVQSTSSLDSQSFVMVPSSDEVVTNLEVLA SRCLHGKNYCRQVLCLYELAKELGCSYTDVAAQDGEAMLRSILASQQPDRCKRAQAFIST QGLRPDTVAELVAEEVTRELLTPSEETGHKQIFSSAEESQTFLQLTTLCQDRTLVGMKLL DKISSVPHGELSCTTELLILAHHCFTLTCHMEGIIRVLQAARMLTDDHLAPNEEYGLVVR LLTGIGRYNEMTYIFDLLHKKHYFEVLMRKKLDPSGTLKTALLDYIKRCRPGDSEKHNMI ALCFSMCREIGENHEAAARTQLKLIDSQPWEDSLKNGHQLKQLLLKALTLMLDAAESYAK DSCVRQALHCHRLTKLITLQIHFLNNGQNTMLINLSHHRLTDCILALPRFYQASIVAEAY DFVPDWAEILYQQVILKGDFNYLEEFKQQRLLRSSIFEEISKKCKHQPTDVVVENLKKLL TYCEDIYLYYKLAYEHKFYEIVNMLLKDPQTGCCLKDMLAG NT seq 7326 nt NT seq  +upstreamnt  +downstreamnt atggcggcagaagagggggccggtagtggtgcttccgctggcggtagttgccgcgctgcg gccatggggcgggttttgccgatgctgctggtgccggtccctgccgaggcaacggggcag ctggggtcccgggcgcaactgcacagagagcaagaggctctagggagtctgacggctgca ggcagcctccaagtgctttccttggcgccgggcggccggagcgggggtggctgctgcctc gagggccccttccggcactttgtatgggagaattcttatgacagcagcacaccaactgac aagcccaaactgcttgctcttagtgaaaattatgaattgctcatctatgaatttaatttg aaagatggaagatgtgatgcaaccattttatatagcattaatgggaagatattgcaaaaa ctcattgaagatcaagatatcagtatttccttattgtctttgagaattctgtcatttcac aataacacatcattattgttcatcaacaaatatatcatcctacacattgtatttcctgaa agagatgctgagattagagtactcaactgtttcacacttcccttgcctgcacaggcagtg gacataattactgatgcccaggtctgcagaggaattctttttgttttgagtaattcaggc tggatttacatttttgacattgtggatggtacatatgtagctcatgtggatttagcactt caccaagaagaaatgtgtaatgagcagcaacaggaaccagccaaggtttcttcctttact tcactgaaagtgtctcatgacctagatgttgtagtgattatcagctcctccaattctgcg gttgctcttaacttaaatttgtatttcaggcaatatccaggacacctgctatacaaaaga acaccagaagaccttcctattcaaggacctaagggaatagatgaagatgatcctgttaac tctgactacaacatgaaactgactaaattttccttccagattgataggtcttggaaagcc cagctatcatcattgaatgaaacaataaagagctccaaacgggaggtctcctgttttgct ccgtggttccaggatattttgcatttggagtcccctgaatctggtaatcacagtaccagt gtgcagagcaggaatttaattacacaggacataatgcatgggcagtataattttccacag aaagatcatgccaagaccagtgatccaggaagatcatggaagataatacacttcattgaa caagaggaacccatagagcttaaatgcgtgtctgtgacaggattcactgcactttttact tggacaatggaaaagacgggctgcaccattgtcctctgggatttggagacccagggcatg caatgtttttctcttggtaaaaagtgtattcctgtagacagtagtggagaccagcaattg tgccttgttttgacagaaaatggactctctctgattttgtttggtttgactcaagaggag tttttaaacagactaatgattcatggaagtgccagcactgtggactctctttgtcatctc aatggttgggggaggtgctcaattcccatacatgcactggaggctgggatagaaaatcgt cagctggacacagtagatttctttttgaagagcaaggaaaatctttttaatccatcctca aaatcttctgtacctgatcagtttgatcacttttcatcacatttatatttaagaaatgtg gaagagctgacaccagcattggatttactttcctcagcggttaaagaaagtgattctgaa gcccaaagcaaacatttttcagaacagttgcttaatcttacactgtctttccttaacaaa caaataaaggagctttttatgcatgctgaagagctagatgagcatctgcagaaaggagtg aatattttgaccagctacattaatgaacttcgaaccttcatgataaagtttccttggaag ctaacagatgctatagataaatatgatgtaaatgaaaatatccctaaagtaaaggaaagg gatatatgggagaaactcagctttgaggatgttattgccgatgccattttaaacaacaaa ataccagaggcacaaaccttcttcagagttaatagtcactctgctcaaagactcgaggaa ctgattggaataggtcttgacttggtctttgacaatttaaaaaagaacaatataaaggaa gcctctgaacttttgaagaatatgggctttgatgtaaaagaccaattgctcaagatatgc ttttatacaactgataaaaatatacgggactttttggttgaaattttaaaagaaaaaaat tatttttctgaaaaagaaaaaagaactatagacttcgtacatcaagttgagaagttttat ttgggacattttcaagaaaatatacagatccagtcacttcccaggtattggataaaagaa caagattctttcaagcacaaagctgttttggactcattcctgaaatatgattgtaaagat gaatttaacaaacaggaccgtagaattgtattaaattgggctctgtggtgggatcaacta acacaagaatccatccttctctccaggataagtccagaagaatacaaattatattcccct gaagctctttggagacacctcacggctcaccatgattggctaaacattatcttgtggatt gaagaatttcaaacccaagatagttatgcttcacttcagccgaacagatggccacctctg acagttgatgttattaaccagaatacttgttgcaacaactacatgaggaatgaaatttta gataagctggccaggaatgggatttttcttgcatctgagctagaagattttgaatgcttc ctcctaagattgagccgtgttgggggtgtgatgcaagataacctccttgttcaaaactac aagaccaaagaaggttggaatttccattctcacttcatcctttattgtttggaacacagt ctacagcatcttctttatgtctatctcgactgttacaaacttagtcctgaaaattgtccc tttttggaaaaaaaagagttatatgaagctcacccttggtttgaatttttagttcagtgt cgacaagtttccagcaatttaacagatcccaaactgatcttccaggctagccttgcaaat gctcagattttgattcccaccaatcaggctagtgtaagcagtatgctactggaaggacat accctcctggcccttgctaccacaatgtatgctcccgggggtgtcaaccaggttgttcag aatgaagaaaatgagaactgtttgaagagagtggatccccagctattgaagatggcattg actccttatcccaagctaaaaactgctctcttcccacaatacactgctcctagtgtcctg ccacctgatattacactctaccaccttattcagtcattatcaccttttgatccaagcaga ttgtttggctggcagtctgccaacacactagctataggagatgcatcaagtcatgtccca catttctctagccccgacctagttaataaatatgctatagtggaacgtctgaactttgct tattatttgcatcatggacggccatcatttgcatttggtacttttctggtccaggaatta atcaagagcaagactcccaagcagttgatccagcaagtaggcaatgaagcctatgtttta gggctctcctccttccacataccttcgataggagctgcctgtgtttgtttcttagaattg cttggtcttgacagcctcaagctcagagttgatatgaaagtggccaatatagttttgaac tacaagtgtagaaatgaagatgttcaatacagctttatcagagagtctttagctgaaaaa gtatctaaactggctgatggtgaaaaggcaaccatagaagaattgcttattctcttagaa gaaggtatatggaacaacattcagcagcaggatataaagaggttatccagtgaatctagt agccagtgggcattagtggtacagttctgcaggctccacaatatgaaactgagcatgtct taccttagagaatgtgccaaagcaaatgattggctgcagttcattattcacagccaactt cataactacgacccagaggaggtgaaatcccttatccagtacttcagcccagtccttcaa gatcacttaaggctggcgtttgagaacttgccctcagtgtccacctctaaaatggactgt gaccaagtctgcaacaagtccccccaggaactccagagaaacaaagagatgactgatttc tttgaaattctgctccagtgctcagaggagccagactcctggcactggctcctggctgag gcagtgaaacaacaggcccctatcctcagtgtcctggcctcatgtctccaggatgcctgt gctattccttgtctctgtgtttggattatcacttctgtggaagacggtgttgcagctgaa gcaatgagacacattcaaggctcaatagagggccacacctgggacctagaggacctttca gtcatctggagaacattattaacaagacagaagagcaaaactcttatcagaggtttctat cttttctttaaggattttccattattattgatgatggagatgtatgaactgtctatgttc ttcaagaactataaggaagctgaagctaaacttctggagttccagaagagccttgaaaca cttgacatggcaactacaagggtccaccctgcaatccctgccatgtggattaaggatcag gtgtgtttccttttgaagcttatgctacggcagtgtaagacccagtacgagttggggaag cttctacagttgtttgttggagtagagcatctcttttctgatggtccagatgtgaagaag ctgtgtgcccttagccaaattttgaaggatacatccattgccattaatcatataattatt accaactacagcattgagaattttcagcatgaatgtagatctattttggaaagactgcag atagatggacattttgctttggccaggagggtagcagaattagctgagttacctgtggac aacttagttattgaagagataacacaggaaatgcagaccctaaaacacactgaacagtgg tccctgaaacagacaagaattgacttctggaaaaaatgccatgagagttttaagaaaaat tccatttcaagcaaagcagcttctgcctttttttcaactcaggcccttgtggcatgcgag cacccaactagatggagcagcattgaggagcgtcatctgctgctcaccctggcagggcac tggcttgcccaggatgacatggtgcctttggacaagctggaggagctagagaaggagatc tggctctgccgcatcacccagcacacccttggaggaaaccaggaggaaatagagcccagg ttttcccgacagatctctactagtggtgaactttcctttgatagtttagccagtgagttt tccttctccaagttggctgctctgaacacatcaaaatacttagaaattaatgactttcca tccaaagaaacatgtgagaatagactggattggaaggagcaggagtcactaaactttttg attgggcttctgttggacgatggttgtgtgcatgaagcaagtagagcgtgccgatatttt catttctataaccgagatgttgccttagtgttgcactgcagagcactggcctcaggggaa gctagtgtggatgacctgcatccagagatccgtgctgtcctacaaagtgctgagttgctt gaggaagaagagcccagcattcctctaaggaaagtccaaagcacttcaagtctggatagt cagtcatttgtgatggtaccttccagtgatgaagtggtgactaatctggaagttctggca agcagatgccttcatgggaagaattactgccggcaggtcctctgtctgtatgaacttgcc aaggaactgggctgttcctatacagatgttgctgcccaggatggtgaagccatgctccgg tcaatcttggcctctcagcagcctgaccgatgcaaacgagcccaggccttcatcagcacc cagggccttcggccagacactgtggctgaactcgtcgctgaagaggtgacacgggagctg ctgaccccgtcagaggaaacaggacataagcagatattcagctcagcagaggaaagccag acatttcttcaactgaccactctatgtcaagaccgcacattggtaggcatgaagttgttg gataagatttcctccgttccccatggggaattatcttgcaccacagagctcctgatcttg gcccatcactgcttcactctgacatgccacatggagggcatcatccgagtcttacaggcc gcccggatgctcacagatgaccacttggcccccaatgaggagtatggactggtggtgcgt ctcctcactggcatcggaaggtacaatgagatgacatacatatttgatttgctgcataaa aagcactacttcgaagtgctaatgaggaagaagttggatccgagtggtaccctgaagaca gctctgctggactacatcaaacgctgccgtcctggagacagtgagaagcacaatatgatt gccctgtgcttcagcatgtgccgggagattggcgagaaccacgaggcagctgcccgtacc cagctgaaattaattgactctcagccctgggaggacagcctcaagaatggacaccagctg aagcaactgctgctgaaggccctgactctgatgctggatgctgcagagagttatgccaag gactcctgtgtgcgacaggccctgcactgtcaccggctcaccaagttgataactctacag attcactttctgaacaatggccagaacacaatgctcatcaacttgagtcaccacaggctg acggactgtatcctggccctacctcggttctaccaggcttctattgtggccgaggcctat gattttgttccagattgggctgaaattctataccaacaagtgattcttaaaggagacttc aattacttagaagaatttaagcagcaaaggttgttaaggtccagtatatttgaagagatt tcaaaaaaatgtaaacaccagcctactgacgtggtggtggaaaacctaaagaagttactc acatattgtgaggatatctacctgtattataagttggcatatgaacacaaattttatgaa attgtaaatatgcttctgaaggaccctcagacaggttgctgtctaaaggacatgctagca ggttag

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