Carlito syrichta (Philippine tarsier): 103272293
Help
Entry
103272293 CDS
T07836
Symbol
RFC1
Name
(RefSeq) replication factor C subunit 1 isoform X2
KO
K10754
replication factor C subunit 1
Organism
csyr
Carlito syrichta (Philippine tarsier)
Pathway
csyr03030
DNA replication
csyr03410
Base excision repair
csyr03420
Nucleotide excision repair
csyr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
csyr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
103272293 (RFC1)
03410 Base excision repair
103272293 (RFC1)
03420 Nucleotide excision repair
103272293 (RFC1)
03430 Mismatch repair
103272293 (RFC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
csyr03032
]
103272293 (RFC1)
03400 DNA repair and recombination proteins [BR:
csyr03400
]
103272293 (RFC1)
DNA replication proteins [BR:
csyr03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
103272293 (RFC1)
DNA repair and recombination proteins [BR:
csyr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
103272293 (RFC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
BRCT
AAA
PTCB-BRCT
BRCT_2
Rad17
AAA_14
RuvB_N
AAA_22
AAA_5
AAA_16
AAA_7
AAA_33
AAA_30
NTPase_1
AAA_17
AAA_19
AAA_18
nSTAND3
RNA_helicase
AAA_28
Motif
Other DBs
NCBI-GeneID:
103272293
NCBI-ProteinID:
XP_008067971
Ensembl:
ENSTSYG00000013946
UniProt:
A0A1U7UQ31
LinkDB
All DBs
Position
Unknown
AA seq
1146 aa
AA seq
DB search
MDIRKFFGVIPSGKKLVSETIKKNEKSKSAEETLKAKKGIKEIKVNSSCKEDDFKLKQPN
KKKRIIYDSDSESEETVQVKNAKKQPEKLSSKSGKILRQDPVTYVSETDEEDNSTCKKAA
SKSKENGASTNSYLGTSNTKKNEENTKTKNKPLSPIKLTPTSVLDYFGTGSIQRSDKKMV
ASKRKESSQNTDESGLSDEAIAKQLQLDEDAELERQLHEDEEFARTLAMLDEEPRTKKAR
KDTEEGETFSSVQASLSKAGKHKYPHKAEQFSDERKSYSPKKQTKCESSKESQQHSKPSA
SKIGESSPKASSKLALMKKKEDSSYKETEPVASKRKENSIELKGDTKTPKKTKSSPAKKE
SVSPEDSEKKRTNYQAYRSYLNREGPKALGSKEIPKGAENCLEGLTFVITGVLESIERDE
AKSLIERYGGKVTGNVSKKTNYLVMGRDSGQSKSDKAAALGTKIIDEDGLLNLIRTMPGK
KSKYEIAVEAEMKKEKSKLERTPPKKAQGKRTISPTKKDSESKKSKLIPRRDSSLKPANK
EAGVFRKGLGFQEQVAEETGGNSKSRNLPDDSSESKVEDLLWVDKYKPTSLKTIIGQQGD
QSCANRLLRWLRNWPKSSSEEKKHAAKFGKFAGKDDGSSFKAALLSGPPGVGKTTTVSLV
CQELGYSYVELNASDTRSKNSLKAIVAESLNNTSIQGFYSSGAGSSGSMKHALVMDEVDG
MAGNEDRGGIQELIGLIKHTKIPIICMCNDRNHPKIRALVHYCFDLRFQRPRVEQIKGAM
MSIAFKEGLKIPPPAMNEIILGANQDIRQVLHNLSMWCARSKALTYDQAKADSHRAKKDI
KLGPFDVARKVFAAGEETAHMSLVDKSDLFFHDYSIAPLFVQENYIHVKPAAAGGDMKKH
LMLLSRAADSICDGDLVDSQIRSKQNWSLLPTQAIYASVLPGELMRGHMTQFPTFPSWLG
KHSSTGKHDRIVQDLALHMSLRTYSSKRTVNMDYLSHIRDALVQPLTSQGVEGVQNVVAL
MDTYYLVKEDFDNIMEISNWGGKPSPFSKLDPKVKAAFTRAYNKEAHLTPYSLQVVKTSR
HSTSPSLDLEYSEELNEDDSQSDEKDQDALETDAMIKKKTRSSKPSKPEKDKESRKGKGK
GKSSKK
NT seq
3441 nt
NT seq
+upstream
nt +downstream
nt
atggacattcggaaattctttggtgttataccaagtggaaagaaacttgtaagtgaaaca
ataaagaagaatgaaaaatcaaagtctgctgaagaaactttaaaagcaaagaaaggaata
aaggaaattaaggtaaatagctcttgtaaagaggatgacttcaaactgaagcaaccaaac
aagaaaaagaggatcatctatgattcagattcagagtcagaggagacagtgcaggtaaaa
aatgccaaaaagcaaccagaaaaattgtcttctaaatctggtaaaattttacggcaggat
cctgttacatatgtttcagaaacagatgaagaagataactctacatgtaagaaggcagcc
tctaagtcaaaagagaatggagcatctacaaatagttatctcggaacatcaaacacaaaa
aagaatgaagaaaacactaagaccaaaaataagcctttgtcaccaataaaacttacaccc
acatcggtgcttgattattttggtactggcagtatccaaagatcagataaaaagatggtg
gcaagcaagagaaaagagtcttcacaaaatacagacgagtctggattaagtgatgaagcc
attgccaagcaattgcaacttgatgaagatgcagagctggaaaggcaactgcatgaagat
gaagagtttgccagaacattagccatgttggatgaagaacccaggactaaaaaggcccga
aaggacacagaagagggagaaacgttttcatctgtccaagccagtttaagtaaagcagga
aaacataaataccctcataaagcagaacaattttcagatgaaagaaagagctacagtcct
aagaagcaaactaaatgtgaaagttcaaaagaatctcagcaacattccaagccatcagct
agcaaaataggagagtcttctccaaaggccagttctaagttggcactcatgaaaaaaaaa
gaagatagctcttataaagaaacagagcctgtggcctcaaaaagaaaagaaaattccatt
gaattgaaaggagacacaaaaactcctaagaaaaccaaaagttctcctgctaaaaaagag
tctgtaagtcctgaagattcagaaaagaaacgcactaattatcaagcttatcgaagctac
ttaaatcgagaaggtcccaaagctctgggctccaaagaaatacccaagggagctgaaaat
tgcttggaaggccttacatttgtaatcacaggagtgctggagtctattgaacgggatgag
gccaaatctctaattgaacgttatgggggtaaagtaacaggaaatgtcagcaaaaaaaca
aactaccttgtcatgggccgtgatagcgggcagtccaagagtgataaggcagcagccttg
ggaacaaaaattattgatgaagatggcctattaaatctgattcgaactatgccaggcaag
aagtccaagtatgaaatagcagttgaagccgagatgaagaaagaaaagtccaaattagaa
agaacgcccccaaaaaaggcccaaggaaaaagaacaattagtccaaccaaaaaggactcg
gaatctaaaaagagtaagctgattcccaggagggacagttctctaaagccagccaacaag
gaagcaggtgtgtttcggaaaggcctaggcttccaggagcaggtggctgaggagacaggt
ggtaacagcaagtctaggaatttgcctgatgacagcagtgaaagcaaagtggaagatttg
ctctgggtggacaaatacaagccaacctcactcaagaccatcattgggcagcaaggtgac
cagagctgtgccaacagactcctacgctggctccgaaactggcccaagagttcttccgag
gagaaaaaacacgctgcaaagtttggtaaatttgccggcaaagatgatggctctagtttt
aaagcagcgttgctgtcaggccccccgggtgttggcaaaactaccacagtgtccctggtg
tgtcaggaattgggctacagctacgtggaactgaatgcaagtgacactcgcagtaagaac
agtttgaaggcaattgttgctgagtcactcaacaataccagcatccaaggcttttattca
agtggagcaggttcttcaggaagcatgaaacacgcgctcgtcatggatgaagtagatggc
atggcgggcaatgaggacaggggaggaattcaggaattaattggcctgataaaacatact
aaaattcctattatttgtatgtgcaacgatagaaatcatcccaagattcgcgctttggtt
cattattgttttgatcttcgatttcaaagacctcgagttgaacagattaagggtgctatg
atgtctattgcattcaaagagggtttaaagattccccctcctgctatgaatgaaataatt
ttgggagccaatcaggatatcagacaggttttacataatctgagtatgtggtgtgcacga
agtaaggcattaacctatgaccaggccaaggcagattctcacagggccaaaaaggacatc
aaactgggcccatttgatgtagcccggaaagtgtttgcagctggagaggagactgctcat
atgtcacttgtggacaaatcagatctcttttttcatgattattcaatagcacccctcttt
gtccaggagaactacatacatgtaaagcctgcggctgcagggggtgacatgaaaaagcac
ttgatgcttttaagccgagcagcggatagcatatgtgatggggacttagtagacagtcag
atccggagtaagcaaaactggagtcttctgcccactcaggccatttatgccagtgttctt
cctggggagctgatgaggggccacatgacccagtttcccaccttcccgagctggctgggg
aagcactcgtccacaggaaagcatgaccgtattgttcaggacctggcattgcatatgagt
ctccgaacttactccagcaaaaggactgtcaacatggattatctgtcacacatacgggat
gcactggtacagcccctgacctcacaaggggtggaaggagtacagaatgttgttgcactt
atggacacatattatttggtgaaagaagactttgacaatatcatggaaattagcaactgg
ggtggcaaacccagtcccttttccaagctggatcccaaggtgaaagcggccttcacaaga
gcatacaataaggaagcccacctaacgccatactcacttcaggtagtaaagacatctcga
cacagcacaagcccatcactggacttggaatacagcgaagagttaaatgaagatgactct
cagtctgatgagaaagaccaagatgctctagaaactgatgccatgatcaagaaaaagaca
agatcttcaaagccatcaaaaccagaaaaagacaaggagtccagaaaaggaaaaggaaaa
ggaaaaagttcaaagaaatga
DBGET
integrated database retrieval system
