Carlito syrichta (Philippine tarsier): 103273748
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Entry
103273748 CDS
T07836
Symbol
CPSF3
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 3 isoform X3
KO
K14403
cleavage and polyadenylation specificity factor subunit 3 [EC:3.1.27.-]
Organism
csyr
Carlito syrichta (Philippine tarsier)
Pathway
csyr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
csyr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103273748 (CPSF3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csyr03021
]
103273748 (CPSF3)
03019 Messenger RNA biogenesis [BR:
csyr03019
]
103273748 (CPSF3)
Transcription machinery [BR:
csyr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
103273748 (CPSF3)
Messenger RNA biogenesis [BR:
csyr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
103273748 (CPSF3)
U7-dependent histone pre-mRNA processing factors
103273748 (CPSF3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CPSF73-100_C
Beta-Casp
Lactamase_B_6
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B_3
Beta_lactamase3
Motif
Other DBs
NCBI-GeneID:
103273748
NCBI-ProteinID:
XP_008069376
Ensembl:
ENSTSYG00000002967
UniProt:
A0A1U7UU30
LinkDB
All DBs
Position
Unknown
AA seq
684 aa
AA seq
DB search
MSAIPAEESDQLLIRPLGAGQEVGRSCIILEFKGRKIMLDCGIHPGLEGMDALPYIDLID
PAEIDLLLISHFHLDHCGALPWFLQKTSFKGRTFMTHATKAIYRWLLSDYVKVSNISADD
MLYTETDLEESMDKIETINFHEVKEVAGIKFWCYHAGHVLGAAMFMIEIAGVKLLYTGDF
SRQEDRHLMAAEIPNIKPDILIIESTYGTHIHEKREEREARFCNTVHDIVNRGGRGLIPV
FALGRAQELLLILDEYWQNHPELHDIPIYYASSLAKKCMAVYQTYVNAMNDKIRKQININ
NPFVFKHISNLKSMDHFDDIGPSVVMASPGMMQSGLSRELFESWCTDKRNGVIIAGYCVE
GTLAKHIMSEPEEITTMSGQKLPLKMSVDYISFSAHTDYQQTSEFIRALKPPHVILVHGE
QNEMARLKAALIREYEDNDEVHIEVHNPRNTEAVTLNFRGEKLAKVMGFLADKKPEQGQR
VSGILVKRNFNYHILSPCDLSNYTDLAMSTVKQTQAIPYTGPFNLLYYQLQKLTGDVEEL
EIQEKPALKVFKNITVIQEPGMVVLEWLANPSNDMYADTVTTVILEVQSNPKIRKGAVQK
VSKKLEMHVYGKRLEIMLQDIFGEDCVSVKDDSILSVTVDGKTANLNLETRTVECEEGSE
DDESLREMVELAAQRLYEALTPVH
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcgattcctgctgaggagagcgaccagctgctgatccgaccccttggagctggg
caagaagtaggaagatcatgtattattctcgagttcaaaggaagaaaaataatgctggat
tgtgggatccaccctggcttagaaggaatggatgctcttccttacatcgatttaattgac
ccagctgagattgatctcctattaattagtcattttcatttggatcactgtggagcgttg
ccctggtttctacagaagacaagtttcaaaggaagaacgtttatgactcatgccacaaaa
gctatttatagatggcttctttcagattatgtcaaagttagtaacatatcagcagacgac
atgctgtatactgagacagatttggaagaaagcatggacaaaattgaaactatcaacttt
catgaagttaaagaagttgcaggaatcaaattttggtgttaccatgccggccatgtccta
ggagccgccatgttcatgattgagatcgcaggcgtgaagcttttgtacacaggtgatttc
tcaagacaagaagataggcacttaatggcagctgaaattcctaatattaagcctgatatt
cttatcattgaatctacgtatgggacccatatccatgagaaacgtgaagagcgagaagca
agattctgtaacactgtccatgatattgtaaacagaggtggcagaggtctcattcctgtc
tttgctcttggaagggctcaggagctgctcttgattctagatgagtactggcagaatcac
ccagaactacatgacattccaatatactatgcatcatctttggccaagaagtgtatggca
gtgtaccagacatatgtaaatgccatgaatgacaaaatccgcaaacagatcaacatcaat
aatccctttgttttcaaacacattagtaacctcaagagcatggatcattttgatgacatt
ggtcccagtgttgtaatggcctccccaggcatgatgcaaagtggcttatccagagagtta
tttgaaagctggtgtactgataagaggaatggtgtcattatagccgggtactgtgtagaa
ggaacacttgccaagcatatcatgtctgaacctgaagaaatcactaccatgtctggacag
aagttaccactgaaaatgtctgttgattacatttctttctctgctcacactgattaccag
caaaccagtgaatttattcgcgctttgaaaccgcctcatgtgattttagtccatggagaa
cagaatgaaatggccagattgaaagcagcgctgattcgagaatatgaagataatgatgaa
gttcacatagaggttcataatcctcggaatacagaagcagtgaccttaaacttcagagga
gaaaaactagccaaggttatgggctttttagcagacaaaaaaccagaacagggccagcgg
gtctccggaatacttgttaaaagaaattttaattatcacatactttctccttgtgacctg
tccaattatactgacttggccatgagcactgtgaaacagacccaagccattccatatact
ggtccctttaatttactctattaccagctacaaaaattgacaggtgatgtagaagaatta
gaaatccaagaaaaacctgctctgaaagtattcaaaaatattactgtaatccaagaacca
ggcatggtggtattagaatggttggcaaacccttctaatgacatgtatgcagatactgta
acaaccgtgatcctagaagttcagtcaaatcccaaaataaggaaaggtgcagtacaaaag
gtttctaaaaaattagaaatgcatgtttacggcaagagattggagatcatgcttcaggac
atatttggagaagactgtgtaagtgtcaaagacgactctattcttagtgtcacagtggat
ggaaaaactgctaaccttaacttggaaacacggactgtggaatgtgaagaaggaagtgaa
gatgatgaatccctccgagagatggtggagctggctgcacagagactatatgaggccctt
acaccagttcattga
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