Carlito syrichta (Philippine tarsier): 103273868
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Entry
103273868 CDS
T07836
Symbol
SMARCC1
Name
(RefSeq) SWI/SNF complex subunit SMARCC1 isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
csyr
Carlito syrichta (Philippine tarsier)
Pathway
csyr03082
ATP-dependent chromatin remodeling
csyr04714
Thermogenesis
csyr05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
csyr00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
103273868 (SMARCC1)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
103273868 (SMARCC1)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
103273868 (SMARCC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csyr03021
]
103273868 (SMARCC1)
03036 Chromosome and associated proteins [BR:
csyr03036
]
103273868 (SMARCC1)
Transcription machinery [BR:
csyr03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
103273868 (SMARCC1)
Chromosome and associated proteins [BR:
csyr03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
103273868 (SMARCC1)
PBAF complex
103273868 (SMARCC1)
GBAF(ncBAF) complex
103273868 (SMARCC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM-assoc_3
SWIRM-assoc_1
SWIRM
SWIRM-assoc_2
Myb_DNA-binding
Myb_DNA-bind_6
HEAT_GCN1
Chromo
DUF919
BRCT_2
SpeFL
Motif
Other DBs
NCBI-GeneID:
103273868
NCBI-ProteinID:
XP_008069513
Ensembl:
ENSTSYG00000012258
UniProt:
A0A1U7ULE5
LinkDB
All DBs
Position
Unknown
AA seq
996 aa
AA seq
DB search
MDFKAGGTLCHILGAAYKYKNEQGWRRFDLQNPSRMDRNVEMFMNIEKTLVQNNCLTRPN
IYLIPDIDLKLANKLKDIIKRHQGTFTDEKSKASHHIYPYSSSQEDEEWLRPVMRKDKQV
LVHWGFYPDSYDTWVHSNDVDAEIEDPPIPEKPWKVHVKWILDTDIFNEWMNEEDYEVDE
NRKPVSFRQRISTKNEEPVRSPERRDRKASANARKRKHSPSPPPPTPTESRKKSGKKGQA
SIYGKRRSQKEEDEQEDLTKDMEDPTPVPNIEEVVLPKNVNPKKDSENTPVKGGTVADLD
EQDEETVTTGGKEDEDPSKGDQNRSVDTGEDNVTEQTNHIIIPSYSSWFDYNCIHVIERR
ALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEYLTSTACRRNLTGDVCAVMRVHAFL
EQWGLVNYQVDPESRPMAMGPPPTPHFNVLADTPSGLVPLHLRSPQVPAAQQMLNFPEKN
KEKPIDLQNFGLRTDIYSKKTLAKSKGASAGREWTEQETLLLLEALEMYKDDWNKVSEHV
GSRTQDECILHFLRLPIEDPYLENSDASLGPLAYQPVPFSQSGNPVMSTVAFLASVVDPR
VASAAAKAALEEFSRVREEVPLELVEAHVKKVQEAARASGKVDPTYGLESSCIAGTGPDE
PEKLEGVEEEKLETDPDDQQPEKTENKVENEMDEGDKAQDGENEKNSEKEQDSEVSEDTK
SDEKETEENKELTDTCKERENDIGKKKIEHEISEGNVATAAAAALASAATKAKHLAAVEE
RKIKSLVALLVETQMKKLEIKLRHFEELETIMDREKEALEQQRQQLLTERQNFHMEQLKY
AELRARQQMEQQQHGQNPQQAHQHSGGPNLAPLGAAGHPGMMPHQQPPPYPLMHHQMPPP
HPPQPGQIPGPGSMMPGQPMPGRMIPTVAANIHPSGSGPAPPGMPPMPGNILGPRVPLTA
PNGMYPPPPQQQPPPPPPADGVPPPPAPGPPASAAP
NT seq
2991 nt
NT seq
+upstream
nt +downstream
nt
atggacttcaaagctggaggcactttgtgtcacattcttggggctgcttacaagtataaa
aatgaacagggatggcggcgttttgaccttcagaatccatcccgaatggatcgtaatgtt
gaaatgtttatgaacattgaaaaaacattggtacagaacaattgtctgaccagacccaac
atctacctcattccagacattgacctgaagttggctaacaaattgaaagatatcatcaaa
cggcatcagggaacatttactgatgagaagtcaaaagcttcccatcacatttatccatat
tcttcctcacaagaggatgaagaatggttgagaccagtgatgagaaaagacaagcaggtt
ttagtgcactggggcttttacccagacagctatgatacttgggttcatagtaatgatgtc
gatgctgaaatagaagatccaccaattccagaaaagccatggaaggttcatgtgaaatgg
attttggacactgatattttcaatgaatggatgaatgaggaggattatgaggtagatgag
aacaggaagcctgtgagttttcgtcagcgaatttcaacaaagaatgaagagccagttaga
agtccagagagaagagacagaaaagcatcagctaatgcccggaagaggaaacattcacct
tcacctccccctcccacacccacagaatcaaggaagaagagtgggaagaaaggccaagct
agtatttatgggaagcgaagaagtcaaaaagaggaagatgagcaagaagatcttacaaag
gatatggaagacccaacacctgtacccaatatagaggaagtagtacttcccaaaaatgtg
aacccaaagaaagatagtgaaaataccccggttaaaggaggaactgtggcggatctagat
gagcaggatgaagaaacagtcacaacaggaggaaaggaagatgaagatcctagcaaaggt
gatcagaatcggtcagttgacactggtgaagataatgtgacagaacagaccaatcacatt
attattcccagctattcatcgtggtttgattataactgtattcatgtgattgaacggcgt
gctcttcctgagttcttcaatggaaaaaacaaatctaagactccagaaatatatttggca
tatcgaaattttatgattgacacatatcgcttaaacccccaagagtatttaaccagcact
gcttgtcggaggaacttgactggagatgtttgtgctgtgatgagggttcatgccttttta
gagcagtgggggcttgtgaattaccaagttgatccggaaagtcgacccatggcaatggga
cctcctcctactcctcatttcaatgttttggctgataccccctctgggcttgtgcctctg
catcttcgatcacctcaggtcccagctgctcaacagatgttaaattttcctgaaaagaac
aaggaaaaacctattgatttgcagaactttggtcttcgtactgacatttactccaagaaa
acattagcaaagagtaaaggtgctagtgctggaagagaatggactgaacaagagaccctt
ctactcctagaggccctggagatgtacaaggatgattggaacaaagtgtcagaacatgtt
ggaagtcgtactcaggatgaatgcatcctccactttttgaggcttcccattgaggaccca
taccttgagaattcagatgcttcccttgggcctctggcctaccaacccgtccccttcagt
cagtctggaaacccagtaatgagtactgttgcttttttggcatctgtggtggaccctcgt
gtggcatctgctgcagcaaaagcggctttggaggaattttctcgggtccgggaggaggta
ccactggaattggttgaagctcatgtcaagaaagtacaggaagcagcacgagcctctggt
aaagtggatcctacctacggcctggagagcagctgcattgcaggaacagggcctgatgag
ccagagaagcttgaaggagttgaagaggaaaaattggaaacagaccctgatgatcagcag
cctgaaaagacagaaaacaaagtagaaaatgaaatggatgaaggtgataaagcacaagat
ggagaaaatgaaaaaaatagtgagaaggaacaggacagtgaagttagtgaggataccaaa
tcagatgaaaaggagactgaagagaacaaagaactcactgatacatgtaaagaaagagaa
aatgatattgggaagaagaaaatagaacatgaaatttccgaaggaaatgttgccacagcc
gcagcagctgctcttgcctcagctgctaccaaagccaagcacttggctgctgtggaagag
agaaagattaagtccctggtagctctcctggttgagacacaaatgaagaaactggagatc
aaacttcgacattttgaggagctagaaactatcatggacagagagaaagaggctctagaa
caacagcggcagcagttgcttactgaacgccagaacttccacatggaacaattaaaatat
gctgaattacgagcccgacagcaaatggaacagcagcaacatggccagaaccctcaacag
gcacaccagcactcaggaggacctaatctggccccacttggagcagcagggcaccctggc
atgatgcctcatcagcagccgcccccctaccctctgatgcaccaccagatgccaccacct
catccaccgcagccaggtcagataccaggcccaggttccatgatgcctgggcaacccatg
ccaggccgcatgattcccactgttgcagccaatatccacccctctggaagtggccccgca
cctcctggtatgcctccaatgccaggaaacatcttaggaccccgggtacccctcacagca
cctaacggcatgtatccccctccaccgcaacagcagccaccaccaccgccacctgcagac
ggggtccctccgcctcctgctccagggccaccagcctcagctgctccttag
DBGET
integrated database retrieval system
