Carlito syrichta (Philippine tarsier): 103274396
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Entry
103274396 CDS
T07836
Symbol
PATL1
Name
(RefSeq) protein PAT1 homolog 1
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
csyr
Carlito syrichta (Philippine tarsier)
Pathway
csyr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csyr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103274396 (PATL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csyr03019
]
103274396 (PATL1)
Messenger RNA biogenesis [BR:
csyr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
103274396 (PATL1)
mRNA degradation factors
5'-3' decay
Decapping complex
103274396 (PATL1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAT1
Motif
Other DBs
NCBI-GeneID:
103274396
NCBI-ProteinID:
XP_008070044
Ensembl:
ENSTSYG00000012748
UniProt:
A0A1U7UCP8
LinkDB
All DBs
Position
Unknown
AA seq
770 aa
AA seq
DB search
MFRYESLEDCPLDEDEDAFQGLGEEDEEIDQFNDDTFGSGAVDDDWQEAHERLAELEEKI
PGAANEQTGNGERDEMDLLGDHEENLAERLSKMVIENELEDPAIMRAVQTRTVLQPQPGS
LNSSIWDGSEVLRRIRGPLLAQEMPTVSVLEYALPQRPPQGPEDDRDLSERALPRRSTSP
IIGSPPVRAVPIGTPPKQTAVPSFNQQILCPKPVHVRPPMPPRYPAPYGERMSPNQLCSV
PNSSLLGHPFPPSVPPVLSPLQRAQLLGGAQLQPGRMSPSQFARVPGFVGSPLAAMNPKL
IQGRVGQMLPPAPGFRAFFSAPPSATPPPQQHPPGPGSHLQNLRSQAPVFRPDTTHLHPQ
HRRLLHQRQQQNRNQHRNLNGAGDRGSHRSSHQDHLRKDPYANLMLQREKDWVSKIQMMQ
LQSTDPYLDDFYYQNYFEKLEKLSAAEEMHGDGPKKERTKLITPQVAKLEHAYKPVQFEG
SLGKLTVSSVNNPRKMIDAVVTSRSEDDETKEKQVRDKRRKTLVIIEKTYSLLLDVEDYE
RRYLLTLEEERPALMDERKHKICSMYDNLRGKLPGQERPSDDHFVQIMCIRKGKRMVARI
LPFLSTEQAADILMTTARNLPFLIKKDAQDEVLPCLLSPFSLLLYHLSSVTVTSLLQQLM
NLPQSAAAPAPSNPHLTAVLQNKFGLSLLLLLLSRGEDLQSSDPATESTQNNQWTEVMFM
ATRELLRIPQAALAKPISIPTNLVSLFSRYVDRQKLNLLETKLQLVQGIR
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgttccgctacgagtctttggaggattgtcctctggatgaagatgaagatgcatttcag
ggtctgggagaagaagatgaagagattgatcaatttaatgatgatacgtttggatcaggt
gcagttgatgatgattggcaggaagcacatgagcgcctggctgaattggaagagaagata
cccggagctgctaatgaacaaacaggcaatggagagagggatgagatggacttgttgggt
gaccatgaggaaaatctggcagaaaggctcagtaagatggtgattgaaaatgaactagaa
gatccagctatcatgagggcagtacagactaggacagttttgcaaccccaaccaggaagt
ctgaattccagcatctgggatggatctgaagttctgaggcgaatccgaggaccactgctt
gctcaggaaatgcctacagtgtctgtattagaatatgccttgcctcagaggcccccacag
ggtccggaagatgatcgggacctttctgaacgtgcattaccaaggcggtcaacttcacct
atcattgggagtcctcctgttagagctgtccccataggcaccccacctaagcagacggct
gtacccagcttcaaccaacagattctgtgtccgaagcctgtccatgttcggcccccaatg
ccacctcgttatcctgctccctatggtgagaggatgtctccaaaccagctctgtagtgtc
ccgaactcttccctcctgggtcacccttttcctcctagtgttcctcctgttctcagcccc
ctccagagagcacagcttcttggaggagcacagctacagcctggacggatgtctcccagc
cagtttgcacgggtccctggatttgttggtagtccacttgctgccatgaatcccaagttg
atacaagggcgagttgggcaaatgcttcccccagcaccaggcttccgtgccttcttcagc
gctccaccctctgctacaccacctccacagcagcatcctccaggcccaggatctcacctg
caaaacttacgatctcaggccccagtgtttagaccagacacaactcaccttcatccacag
caccgtcgactattgcatcagagacagcaacagaatagaaatcagcatcggaatctcaat
ggtgcaggagatagaggaagtcaccggagcagtcaccaagatcatctccgaaaggatcca
tatgccaatctcatgttgcagcgcgaaaaggattgggtctctaaaatccagatgatgcag
ctgcaaagcactgatccctacctggatgatttttattaccagaattactttgaaaaactg
gagaaactttcagctgctgaagaaatgcatggtgatggccctaaaaaggagcgcaccaag
ctcatcactcctcaggtggccaaacttgagcatgcctataagccagtgcagttcgagggc
tctttgggaaagcttactgtctctagtgtgaataatccccgaaaaatgattgacgctgtt
gtgacatcccggagcgaggatgatgagacaaaagaaaaacaggttcgagacaagagaaga
aaaacccttgtcataattgagaaaacttatagtttactccttgatgtagaagattatgaa
aggcgttacctcttaactctagaagaagagcgacctgccctgatggatgaaagaaagcac
aaaatttgtagcatgtacgacaatttaagggggaaattgcctggacaagagaggccaagt
gatgaccactttgtacagatcatgtgtattcgaaaagggaagagaatggttgcccgtatt
cttcctttcctctccacagagcaagcagctgacattctcatgacaacagccaggaacctt
cctttccttatcaaaaaggatgcacaagatgaggtgctgccatgcttattgagtcccttc
tctctcctcctctatcatctttcatcagtgactgtcaccagccttctgcaacagctaatg
aacctacctcaaagtgcagctgcaccagcaccctccaatcctcacctcactgctgtgctc
cagaacaagtttggcctgtcactgctcctcctcctcctgagccgtggggaagatctacag
agttcagaccctgctacagaatcaacacagaataaccagtggacagaggtgatgtttatg
gcaacccgagaacttctacggattccccaagcagccctggccaagccaatctctataccc
acaaacttagtatctctcttttctcgctatgttgaccggcagaaactgaacttactggag
acaaaactgcagctagttcaggggatacgataa
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integrated database retrieval system