Carlito syrichta (Philippine tarsier): 103274425
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Entry
103274425 CDS
T07836
Symbol
MSH2
Name
(RefSeq) DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
csyr
Carlito syrichta (Philippine tarsier)
Pathway
csyr01524
Platinum drug resistance
csyr03430
Mismatch repair
csyr05200
Pathways in cancer
csyr05210
Colorectal cancer
Brite
KEGG Orthology (KO) [BR:
csyr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
103274425 (MSH2)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
103274425 (MSH2)
09162 Cancer: specific types
05210 Colorectal cancer
103274425 (MSH2)
09176 Drug resistance: antineoplastic
01524 Platinum drug resistance
103274425 (MSH2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csyr03400
]
103274425 (MSH2)
DNA repair and recombination proteins [BR:
csyr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
103274425 (MSH2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
MutS_I
AAA_27
FeoA
Motif
Other DBs
NCBI-GeneID:
103274425
NCBI-ProteinID:
XP_021575176
Ensembl:
ENSTSYG00000009997
UniProt:
A0A3Q0EHQ3
LinkDB
All DBs
Position
Unknown
AA seq
916 aa
AA seq
DB search
MAVQPKETLQLESAAEVGFVRFFQGMPEKPTTTVRLFDRGDFYTAHGEDALLGAKNLQSV
VLSKMNFESFVKDLLLVRQYRVEVYKNRAGNKASKENDWYLAFKASPGNLSQFEDILFGN
NDMSSSIGVVGVKMSTVDGQRQVGVGYVDSIQRKLGLCEFPDNDQFSNLEALLIQIGPKE
CVLPVGETAGDMGKLRQIIQRGGILITERKKADFSTKDIYQDLNRLLRGKKGEQMNSAVL
PEMENQVAVSSLSAVIKFLELLSDDSNFGQFELTTFDFRQYMKLDIAAVRALNLFQGSVE
DTTGSQSLAGLLNKCKTPQGQRLVNQWIKQPLMDKNRIEERLNLVEAFVEDAELRQILQE
DLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIQALEKYEGKHQTLLLAVFVT
PLIDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSELREIMNDLEKKMQSTLLS
AARELGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNFSTVDIQKNGVKFTNSKLTS
LNEEYTKNKTEYEEAQDAIVKEIVNISSGYVEPMQTLNDVLAQLDAVVSFAHVSNGAPIP
YVRPIILEKGQGRIILKASRHACVEVQDEVAFIPNDVYFEKEKQMFHIITGPNMGGKSTY
IRQTGVIVLMAQIGCFVPCESAEVSIVDCVLARVGAGDSQLKGVSTFMAEMLETASILRS
ATKDSLIIIDELGRGTSTYDGFGLAWAISDYIATKIGAFCMFATHFHELTALANQIPTVN
NLHVTALTTEETLTMLYQVKKGVCDQSFGIHVAELANFPKHVIECAKQKALELEEFQHIG
ESQGYDETEPAAKKCYLEREQGEKIIQEFLSKVKQVPFTEMSEENITVKLKQLKAEVMAK
NNSFVNEIISRIKVTT
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcagccgaaggagacgctgcagctggagagcgcggccgaggtcggcttcgtg
cgcttcttccagggcatgccggagaagccgaccaccacggtgcgcctcttcgaccggggc
gacttctacacggcgcacggcgaggacgcgctgttaggagcaaagaatctgcagagtgtc
gtgcttagtaaaatgaattttgagtcttttgtaaaagatcttcttctggttcgtcagtat
agagttgaagtttataagaatagagctggaaataaggcatccaaggagaatgactggtat
ttggcatttaaggcttctcctggcaatctatctcagtttgaagacattctctttggtaac
aatgatatgtcatcttccattggtgttgtgggtgttaaaatgtccactgttgatggccag
agacaggttggagttggctatgttgattccatacagaggaagctgggactgtgtgagttc
cctgataatgatcagttctccaatcttgaggctctgctgattcagatcggaccaaaggag
tgtgttttaccagtaggagagactgctggagacatgggtaaactgaggcagattattcaa
agaggaggaattctgatcacagaaagaaaaaaagcggacttttccacaaaagacatttat
caggacctcaaccggttgttgagaggcaaaaagggagaacagatgaatagtgctgtcttg
ccagaaatggagaatcaagttgcagtgtcatcattgtctgcagtaatcaagtttttagaa
ctcttatcagatgattcaaattttgggcagtttgaactgaccacttttgacttcagacag
tacatgaaattggatattgcagcagtcagagcccttaaccttttccagggttctgttgaa
gatactactggctctcagtctctggctggattgctgaataaatgcaaaacccctcaaggg
caaagattagttaaccagtggattaagcagccactcatggataagaacagaatagaagag
agattaaatttagtggaagcttttgtagaagatgcagaattgaggcagattttacaagaa
gatttacttcgtcgatttccagatcttaaccgacttgccaagaaatttcaaagacaagca
gcaaatttacaagattgttaccgactctatcagggtataaatcagctccctaatgttata
caggctctggaaaaatatgaaggaaaacaccagacattgctgctggcagtttttgtgact
ccacttatcgatcttcgttctgatttctccaagtttcaagagatgatagaaacaacttta
gatatggatcaggtagaaaatcatgaatttcttgtaaaaccttcatttgatcctaatctg
agtgaattaagagaaataatgaatgacttggaaaaaaagatgcaatcaactttgctaagt
gcagccagagaacttggcttggaccctggcaaacagattaaattggattccagtgcacag
tttggatattactttcgtgtaacctgtaaggaagaaaaagttcttcgtaacaataaaaac
ttcagtacagtagacatccagaagaatggtgttaaatttaccaacagcaaattgacttcc
ttaaatgaagaatataccaagaataaaaccgagtatgaggaagcccaggatgccattgtt
aaagaaattgttaatatctcttcaggctacgtggaaccaatgcaaacactcaatgatgtg
ttagctcagctagatgctgttgtgagctttgctcatgtatcaaatggagcacctattcca
tatgtgcgaccaatcattttggagaaaggacaaggaagaattatactgaaagcatccaga
catgcttgtgttgaagttcaagatgaagttgcatttattcctaatgatgtatactttgaa
aaagagaaacagatgttccacatcatcactggccccaatatgggaggtaaatcaacatac
attcgccaaactggggtgatagtactcatggcccaaattgggtgttttgtgccatgtgag
tcggccgaagtgtccattgtggactgcgtcttggcccgggtaggggctggggacagtcag
ttgaaaggagtctccacattcatggctgagatgttagaaactgcttctatcctcaggtct
gcaaccaaagattcattaataatcatagatgaattgggaagaggaacttctacctacgat
ggatttgggctagcatgggctatatcagattacattgcaacaaagatcggtgctttttgc
atgtttgcaacccattttcatgaacttactgccttggccaatcagataccaacggttaat
aatctacatgttacagcactaaccactgaagagaccttaactatgctttatcaggtgaag
aaaggtgtctgtgatcagagttttgggattcatgttgcagagctggctaatttccctaaa
catgtaatagagtgtgctaaacaaaaagccctggagctcgaggagttccagcatattgga
gaatcacaaggctatgatgagacagaaccagcagcgaagaagtgctatctggagagagag
caaggtgaaaaaatcatccaggagtttctatccaaggtgaaacaagtaccctttaccgag
atgtcagaagaaaacatcacagtaaagttgaaacagctgaaggctgaagtgatggcaaag
aataatagttttgtaaatgaaatcatttcccgaataaaggtgactacatga
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