Carlito syrichta (Philippine tarsier): 103274755
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Entry
103274755 CDS
T07836
Symbol
COL4A6
Name
(RefSeq) collagen alpha-6(IV) chain isoform X2
KO
K06237
collagen type IV alpha
Organism
csyr
Carlito syrichta (Philippine tarsier)
Pathway
csyr04151
PI3K-Akt signaling pathway
csyr04510
Focal adhesion
csyr04512
ECM-receptor interaction
csyr04820
Cytoskeleton in muscle cells
csyr04926
Relaxin signaling pathway
csyr04933
AGE-RAGE signaling pathway in diabetic complications
csyr04974
Protein digestion and absorption
csyr05146
Amoebiasis
csyr05165
Human papillomavirus infection
csyr05200
Pathways in cancer
csyr05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
csyr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
103274755 (COL4A6)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
103274755 (COL4A6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
103274755 (COL4A6)
09142 Cell motility
04820 Cytoskeleton in muscle cells
103274755 (COL4A6)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
103274755 (COL4A6)
09154 Digestive system
04974 Protein digestion and absorption
103274755 (COL4A6)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
103274755 (COL4A6)
09162 Cancer: specific types
05222 Small cell lung cancer
103274755 (COL4A6)
09172 Infectious disease: viral
05165 Human papillomavirus infection
103274755 (COL4A6)
09174 Infectious disease: parasitic
05146 Amoebiasis
103274755 (COL4A6)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
103274755 (COL4A6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csyr04147
]
103274755 (COL4A6)
00536 Glycosaminoglycan binding proteins [BR:
csyr00536
]
103274755 (COL4A6)
Exosome [BR:
csyr04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
103274755 (COL4A6)
Glycosaminoglycan binding proteins [BR:
csyr00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
103274755 (COL4A6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
103274755
NCBI-ProteinID:
XP_008070365
Ensembl:
ENSTSYG00000009922
UniProt:
A0A1U7UJM4
LinkDB
All DBs
Position
Unknown
AA seq
1688 aa
AA seq
DB search
MHPGLWLLLVTWCLTEELAGAGEKKSYGKPCGGQDCSGVCKCFPEKGARGRPGPIGIQGP
TGPQGFSGLTGLSGLKGERGLPGPLGPYGSKGDKGPMGVPGFLGINGIPGHPGPPGPRGP
PGLDGCNGTQGAVGFPGPDGYPGLLGPPGLPGQKGSKGEPVLVQGSFKGMKGDPGLPGLD
GITGPQGTPGSPGAAGPIGPPGLQGPPGPPGFPGPDGNMGLGFQGEKGVKGDVGLPGPAG
PPPSTGELEFMGFPKGKKGSKGEPGPKGLPGISGPPGFPGLGTTGEKGEKGIPGLPGPRG
PIGSEGVQGPPGRQGNKGSPGFPGLNGFPGIKGEKGGIGLPGPDVFIDIDGAVISGYPGD
PGVPGLPGLKGDEGFQGMRGPSGIPGLPALSGIPGALGPQGFLGLKGDQGNPGRTTIGAA
GLPGRDGLPGPPGPPGPPGPAFETGTLHNKEPGFPGLRGERGPKGNSGLKGIKGDSGFCA
CDGGVPNTGPPGEPGLPGPQGLIGLPGLKGTKGDPGSGGTQGPAGAPGLSGPPGLAGSKG
EKGEPILSTRSGMPGEQGDPGPQGFPGVTGAPGNDGVPGSPGLPGLPGDGGQGFPGEKGL
PGLPGGKGQRGPIGFPGIGLPGPPGPRGLPGDKGVNGLPGQQGLPGLPGITLPCIIPGSF
GPAGFPGTPGFPGPKGARGLPGTLGQPGSRGNKGEPGSPGLVHLPELPGFPGPRGEKGLP
GFPGLPGKDGLPGKVGSPGLPGSKGTPGDIFGAENGALGEQGLQGLPGDRGFPGDSGFPG
PKGVHGKPGLLGPKGDRGSPGIPGQVGLPGLPGSGGLYGIKGKPGLPGAPGFPGISGHPG
KKGSRGEIGPPGSFGKRGLPGLKGLPGSPGLVGLLGSPGLPGSIGLPGLPGPKGEKGSIG
LIGFPGVPGLPGIPGASGLKGIPGSIGKIGPSGQAGSPGEKGDRGDPGPVGIPSPRPLVP
NLWLKGDKGSQGSAGSDGFPGPRGDKGDSGHPGPSGLPGVSGFPSIIKGLIGRPGSPGSI
GLRGLPGLKGSPGITGFPGMPGESGLQGLRGTPGLPGTSGFPGSKGDQGQMLEISGSPGS
RGQRGETGFKGAKGKYGQIGDVGFPGNKGENGKVGISGDLGLPGSPGLPGIAGVRGDPGL
PGPSGHPGATGPLGPPGLIGPKGFPGFPGLHGLNGLPGTKGTHGTPGPSITGVPGPAGLP
GPKGERGSPGTVIGAPGKPGLRGQKGSRGFPGLPGPAGLLGAPGISLPSVIAGQPGDPGR
PGLDGERGRPGPPGPPGPPGPSSDQGDPGDPGFPGIPGPQGPKGDQGIPGFSGLPGELGL
KGMRGEPGFMGTPGKVGPLGDPGFPGMKGKAGPRGSSGPQGAPGKTPVAEAVQVPPGPLG
QPGIDGIPGLTGDPGVQGPAGLQGSKGLPGIPGKDGPSGLPGPPGGLGDPGVPGLQGPPG
FEGAPGQQGPLGRPGMPGQSVKVGYTLVKHSQSEQVPLCPIGMSQLWVGYSLLFVEGQEK
AHNQDLGFAGSCLPRFSTMPFIYCNINEVCHYARRNDKSYWLSTTAPIPMMPVGRAQIPQ
YISRCSVCEAPSQAIAVHSQDITIPQCPLGWRSLWIGYSFLMHTAAGAEGGGQSLVSPGS
CLEDFRATPFIECSGARGTCHYFANKYSFWLTTVEERQQFGEEPVSETLKAGQLHTRISR
CQVCMKSL
NT seq
5067 nt
NT seq
+upstream
nt +downstream
nt
atgcaccctgggttgtggctgctcctggttacgtggtgcctcactgaagaactggcagga
gcgggagaaaagaagtcttatggaaagccatgtggaggtcaagactgcagtggagtctgc
aaatgctttcctgaaaaaggagcaagagggcgacctggaccaattggaattcaaggtcca
acaggccctcaaggattctctggccttactggtttatcagggttgaaaggagaaaggggc
ttaccaggccctctgggaccttatggatcaaaaggagataagggtcccatgggagttcct
ggctttcttggcatcaatgggattccgggccaccctggaccgccaggccccagaggccca
cctggtctggatggctgtaatggaactcaaggagctgttggatttccaggccctgatggc
tatcctgggcttcttggaccaccggggcttcctggtcagaaaggttctaaaggagagcca
gtccttgttcaaggtagtttcaaaggaatgaagggggatcctgggctgcctggactggat
ggaatcactggcccacaaggaacacctggatcccctggagctgcaggacccattggacca
ccaggattgcaaggtcctccaggaccccctggtttccctggtcctgatgggaatatgggg
ttaggttttcaaggagaaaaaggagtcaagggggatgttggcctccctggtccagcagga
cctccaccatctactggggagctggaattcatgggatttcccaaggggaagaaaggatcc
aagggtgaaccagggcctaagggtttgccaggcataagtggccctccaggttttccggga
cttggaactactggagaaaagggagaaaagggaattcctggtttgccaggacctaggggt
cccataggttcagaaggagtccaaggccctccaggaagacagggcaataaggggtctcca
ggtttcccaggccttaatggtttcccaggaattaagggtgaaaagggtggcattggcctg
ccaggcccagacgttttcatcgatatagatggtgctgtgatctcaggttatcctggagac
cccggtgtaccaggcctcccaggtcttaaaggagatgaaggcttccagggcatgcgtggt
ccttcgggtatccctggcttgccagcattatcaggtatcccaggtgccctagggcctcag
ggatttctaggattgaagggggaccaaggaaacccaggccgcactacaattggggcagct
ggcctccctggcagagatggtttgcctggcccaccaggcccaccaggcccacctggtcca
gcatttgagactggaaccctacacaacaaagagcctgggttccctggtctccgaggagaa
cgaggtccaaaaggaaactcaggcctcaaaggaataaaaggggactcaggcttttgtgct
tgtgatggtggtgtccccaacactggaccccctggggaaccaggcctgcctgggccacaa
ggtctcataggccttccaggccttaaaggaaccaaaggagatccaggctctgggggcaca
cagggtccagcaggggctccgggtttatctgggcctccaggtctcgcaggttccaaagga
gagaagggagaacctattctcagtacaagatcagggatgccaggggagcagggtgatcct
ggcccccagggattccctggtgtgacaggagccccaggcaatgatggagtaccaggttca
ccaggtctgccaggccttccgggtgatggaggacagggtttcccaggtgaaaaggggtta
ccaggacttcctggtggaaaaggccagcgtggtccaattggcttccccggaattgggttg
ccaggacctcctggacctcgtgggcttcctggagataaaggagtaaatggattaccaggg
caacaaggcctccctggacttccaggaatcaccctgccctgtattattcctgggtcattc
ggtccagcaggattccctggaactcctggattcccaggccctaaaggggcccgtggcctc
cctggaactttaggccagcctggatcacgtggaaataaaggagaacccgggagcccagga
ttggttcatctccctgaactgccaggatttcctggacctcgtggggagaagggcttgcct
ggatttcctgggctccctggaaaagatggcttgcctggaaaggttggcagtccaggttta
cctggttccaagggaacccctggtgacatctttggtgctgaaaatggtgctctgggggag
caaggcctacagggattgccaggggacagaggatttcctggagactctggctttccagga
cccaagggtgtgcatgggaagcctggcttgctaggccccaaaggtgatcggggcagccca
ggaataccagggcaggtgggactgccaggtcttccaggttccggtggtttgtatggcatc
aagggcaaacctgggctcccaggagcgccaggctttccaggcatttcaggacatcctgga
aagaaaggttcaagaggcgagataggtccccctggatcatttggaaagagaggtctgcct
gggctaaaaggccttcctggatctccggggctagttggcttgctgggaagtccaggcttg
ccagggagtatcggtttgccaggcctcccaggcccaaagggtgagaaggggtccattgga
ctgataggttttccaggggtgccaggtctccctggtattcctggagcaagtggattaaag
ggaattccaggatctatcggaaaaataggaccatctggacaggctggtagtcctggtgaa
aagggagacagaggcgatccagggccagttggaatacccagtccaagacctcttgtgcca
aacctttggctcaaaggagacaaaggctctcagggctcagccggatcagatggatttcct
gggcccagaggtgacaaaggagactctggccaccctgggccatcaggcctgcctggagtt
tctggcttccctagcattatcaaaggacttattgggaggccaggctcccctggctccata
ggactacggggcttacctggcctgaaagggtcccctgggatcacaggcttcccaggaatg
ccaggagaaagtggtttacagggtctcagagggactcctggactcccaggaacatctggt
ttcccaggctcaaaaggggatcaaggccaaatgcttgaaatttctggtagcccaggatcc
aggggacaacgtggtgaaactggttttaaaggtgcaaaaggaaaatatgggcaaattggt
gatgtgggtttcccaggcaataagggtgaaaatggaaaagttggtatttctggagacctt
ggccttcctggctccccaggactgccaggaattgcaggtgtaagaggagacccaggactt
ccaggtccctctggtcacccaggggcaactgggcccctgggaccccctggcttaatagga
cccaaaggcttccctggatttcctggtttgcatggactgaatgggcttccaggcaccaag
ggtacccatggcactccaggacccagtatcactggtgtgcctgggcctgctggtctacct
ggacccaaaggggagaggggatctccaggaactgtcatcggagctccagggaagccaggc
ttgagaggacagaaaggcagtagaggtttcccaggtcttccaggccctgctggtctcctt
ggtgccccaggcatctccttgccctcagtcatagcaggacagcctggtgaccccgggcga
ccaggcctagatggagaacgaggccgcccaggcccccctggacccccaggtccccctggg
ccatcctcggatcaaggcgaccctggagaccctggctttcctggaattcctggtcctcaa
gggcccaagggagaccaaggaataccaggtttctctggcctccctggagagctaggactg
aaaggcatgagaggtgagcccgggttcatggggactccaggcaaggttgggccacttgga
gacccaggatttcctgggatgaaaggaaaggcagggccaagaggttcttctggccctcaa
ggtgctcctggaaaaacaccagttgctgaagctgtccaggttcctcctggacccttgggt
caaccaggcattgacggcattcctggcctcacaggggaccctggagtccaaggccctgcg
ggcctacaaggctccaaaggtttacctggcatccctggcaaagatggccccagtgggctc
cctggccctcctgggggtcttggtgatcctggtgtccctggactgcaaggccctccagga
tttgaaggagcaccagggcagcaaggccccctggggaggcccggaatgcctggtcagagt
gtgaaggtgggctacacgctggtgaagcacagccaatcggaacaggtgcccctgtgcccc
atcgggatgagccagctatgggtgggttacagcttgctgttcgtggagggacaggagaaa
gcccacaaccaggacctgggctttgctggctcctgcctaccccgcttcagcaccatgccc
ttcatctactgcaacatcaacgaagtgtgccactatgccaggcgcaacgataaatcctac
tggctctccaccactgcccccatccccatgatgcctgtcggcagggcccagattccccag
tacatcagccgctgctctgtgtgtgaggcaccctcacaagccattgctgtgcacagccag
gacatcaccatcccacagtgtcctctgggctggcgcagcctctggatcgggtattcattc
ctcatgcatactgccgctggtgccgagggcggaggccagtctctggtctcacctggctcc
tgcctagaggactttcgggccactcctttcatcgagtgcagtggtgccagaggcacctgc
cactactttgccaacaagtacagtttctggctgacaacagtggaggagaggcagcagttt
ggggaggagcctgtgtctgaaacactgaaagctgggcagctccacacccggatcagtcgc
tgccaggtgtgtatgaaaagcctgtag
DBGET
integrated database retrieval system
