Carlito syrichta (Philippine tarsier): 103276220
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Entry
103276220 CDS
T07836
Symbol
POLR2B
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2 isoform X1
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
csyr
Carlito syrichta (Philippine tarsier)
Pathway
csyr03020
RNA polymerase
csyr03420
Nucleotide excision repair
csyr05016
Huntington disease
Brite
KEGG Orthology (KO) [BR:
csyr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
103276220 (POLR2B)
09124 Replication and repair
03420 Nucleotide excision repair
103276220 (POLR2B)
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
103276220 (POLR2B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csyr03021
]
103276220 (POLR2B)
03400 DNA repair and recombination proteins [BR:
csyr03400
]
103276220 (POLR2B)
Enzymes [BR:
csyr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
103276220 (POLR2B)
Transcription machinery [BR:
csyr03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
103276220 (POLR2B)
DNA repair and recombination proteins [BR:
csyr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
103276220 (POLR2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
103276220
NCBI-ProteinID:
XP_008071816
Ensembl:
ENSTSYG00000006881
UniProt:
A0A1U7V0T5
LinkDB
All DBs
Position
Unknown
AA seq
1174 aa
AA seq
DB search
MYDADEDMQYDEDDDEITPDLWQEACWIVISSYFDEKGLVRQQLDSFDEFIQMSVQRIVE
DAPPIDLQAEAQHASGEVEEPPRYLLKFEQIYLSKPTHWERDGAPSPMMPNEARLRNLTY
SAPLYVDITKTVIKEGEEQLQTQHQKTFIGKIPIMLRSTYCLLNGLTDRDLCELNECPLD
PGGYFIINGSEKVLIAQEKMATNTVYVFAKKDSKYAYTGECRSCLENSSRPTSTIWVSML
ARGGQGAKKSAIGQRIVATLPYIKQEVPIIIVFRALGFVSDRDILEHIIYDFEDPEMMEM
VKPSLDEAFVIQEQNVALNFIGSRGAKPGVTKEKRIKYAKEVLQKEMLPHVGVSDFCETK
KAYFLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGMFKNLLKEVRIYAQ
KFIDRGKDFNLELAIKTRIISDGLKYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLS
HLRRLNSPIGRDGKLAKPRQLHNTLWGMVCPAETPEGHAVGLVKNLALMAYISVGSQPSP
ILEFLEEWSMENLEEISPAAIADATKIFVNGCWVGIHKDPEQLMNTLRKLRRQMDIIVSE
VSMIRDIREREIRIYTDAGRICRPLLIVEKQKLLLKKRHIDQLKEREYNNYSWQDLVASG
VVEYIDTLEEETVMLAMTPDDLQEKEVAYCSTYTHCEIHPSMILGVCASIIPFPDHNQSP
RNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPQKPLVTTRSMEYLRFRELPAGINSIV
AIASYTGYNQEDSVIMNRSAVDRGFFRSVFYRSYKEQESKKGFDQEEVFEKPTRETCQGM
RHAIYDKLDDDGLIAPGVRVSGDDVIIGKTVTLPENEDELESTNRRYTKRDCSTFLRTSE
TGIVDQVMVTLNQEGYKFCKIRVRSVRIPQIGDKFASRHGQKGTCGIQYRQEDMPFTCEG
ITPDIIINPHAIPSRMTIGHLIECLQGKVSANKGEIGDATPFNDAVNVQKISNLLSDYGY
HLRGNEVLYNGFTGRKITSQIFIGPTYYQRLKHMVDDKIHSRARGPIQILNRQPMEGRSR
DGGLRFGEMERDCQIAHGAAQFLRERLFEASDPYQVHVCNLCGIMAIANTRTHTYECRGC
RNKTQISLVRMPYACKLLFQELMSMSIAPRMMSV
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgtatgacgcggacgaggatatgcaatatgatgaggacgatgatgaaatcaccccggat
ttgtggcaagaagcatgctggattgtaatcagttcctattttgacgagaaaggcttggtc
agacaacagctggattcctttgatgagtttattcaaatgtctgttcaaagaattgtggag
gatgctccccctatagacctgcaggccgaagctcagcatgctagtggagaagttgaagag
ccgccaagatatttgctgaagtttgaacaaatttacctctccaagcctacccattgggaa
cgagatggtgctccttcaccaatgatgccaaatgaagccagattaagaaatctcacatat
tctgctccactttacgttgatataacaaaaacagtcattaaagaaggtgaagaacagctt
cagactcagcatcagaaaacttttatcggaaaaattccaattatgttgcggtcaacttat
tgcctattgaatggcttaacggatcgtgatctttgtgagttaaatgaatgccctttggat
cccggtggctatttcattattaatggatcagaaaaggttctgattgctcaagagaaaatg
gcaacaaacacggtctatgtgtttgccaaaaaggattctaaatatgcttacacaggagag
tgtagatcatgtctggagaattcttcccgccccaccagtactatatgggttagcatgctg
gcaagaggaggacagggtgccaaaaagagtgctatcggtcagcgcattgtggcaactctt
ccgtatatcaagcaagaagttcccattattattgtgttcagagcattaggttttgtatct
gacagagatattttagaacatattatttatgatttcgaagatccagagatgatggagatg
gttaaaccttcccttgatgaagcttttgtcatccaagaacagaatgtggcactaaatttt
attggttcaagaggggcaaaacctggtgttactaaagagaaaagaattaaatatgcaaaa
gaagtcttacagaaggaaatgctccctcatgttggtgtcagtgatttttgtgagactaaa
aaagcctatttcttggggtacatggttcataggttacttctagcagctttgggtagaaga
gaattagatgacagagatcactatggaaacaaaagattggatcttgctggacccctactg
gcattcttatttagaggtatgtttaagaatttgcttaaagaagtgcggatctatgcacag
aagtttattgatcgaggaaaggattttaacttggaattggcaattaaaacaaggattata
tctgatggcctaaaatactccttagctactggaaactggggtgaccaaaagaaagctcat
caagccagagctggagtatctcaggtattaaaccgcctgacttttgcatctactctttct
cacctgcgccgtttaaattcccctatcggtagagatggcaagctggcgaaaccaagacag
ttgcacaatacgttgtggggaatggtgtgtcctgctgagaccccagagggccatgctgta
ggacttgtgaagaatttagccctgatggcttatatttcagtaggatctcaaccatctcca
attctggaatttttggaagagtggagtatggaaaacttagaggaaatttctcctgcagct
attgctgatgcaaccaagatttttgttaatggctgctgggttggaatacataaggatcct
gaacaacttatgaacaccctaaggaaattgcggcgtcagatggacatcattgtgtctgaa
gtttctatgattagagatattcgggaaagagagattcggatctatacagatgcaggccgt
atttgtagaccacttctgattgtggaaaagcaaaagctacttttgaagaagagacatatt
gaccagttgaaagagagagaatataacaactacagttggcaggatcttgtggccagtggg
gtagtggaatatattgataccctagaagaagaaacagtgatgcttgcaatgactccagat
gatttacaggagaaagaagtagcttattgttctacttatacacactgtgagattcatccg
tcaatgatccttggtgtctgtgcatctatcattccctttcctgatcataaccagtctcct
agaaacacataccagtctgctatgggtaagcaggctatgggagtttatatcaccaacttc
catgttcgtatggacacgttggcccacgtgctctattatcctcaaaagccactcgtgact
acacgatctatggagtacctacgatttagagagctgccagcaggtatcaactcaattgtg
gccattgcttcctacactggctataatcaggaagactctgttatcatgaatcgttcagct
gtagaccgaggctttttcaggtctgtgttctatcgctcatacaaagagcaggagtctaaa
aaaggatttgatcaagaagaagtttttgagaagcctacacgtgaaacatgccagggtatg
cgacatgccatttatgacaagctggatgatgatggcttgatagcaccaggggttcgtgta
tcaggagatgacgttattataggcaaaacagtcacgttgcctgaaaatgaagatgaactg
gagagcactaacagacgctataccaagagagactgtagcactttcctcagaaccagcgag
acgggcattgtggatcaggtcatggtcacgctcaaccaggaaggatataaattttgtaaa
ataagggtgcgctctgttaggattccacagattggagacaaattcgctagtcgacatggt
caaaagggtacttgcggtattcagtatagacaagaggacatgcctttcacctgtgaaggt
atcacccctgatatcatcataaatcctcatgccatcccctctcgtatgactatcggtcac
ttgattgaatgtcttcaagggaaggtgtcagctaacaagggtgaaattggtgatgccact
ccatttaatgatgctgttaatgtgcagaagatttctaatcttttatctgattatggctat
catctcagaggaaatgaggtcctctacaacgggttcactggtcgaaaaatcacatcacaa
atttttattggtcccacttattaccagcgtttgaagcacatggtggatgataagattcat
tctcgtgctagaggacctattcagatccttaatagacagcccatggagggcagatctcgt
gatggtggcctgcgttttggagaaatggagcgagactgtcagattgcccatggggcagcc
cagtttttaagggaaaggttgtttgaggcatcagatccgtatcaggttcatgtgtgcaat
ctttgtggaataatggcgattgctaacaccaggacccatacatacgaatgcaggggctgc
cgcaataaaacccagatttctttggtgcgaatgccctatgcatgcaaactgttgtttcag
gaacttatgtccatgagtattgcacctcgaatgatgagtgtttag
DBGET
integrated database retrieval system
