Carlito syrichta (Philippine tarsier): 103276539
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Entry
103276539 CDS
T07836
Symbol
COL4A2
Name
(RefSeq) collagen alpha-2(IV) chain
KO
K06237
collagen type IV alpha
Organism
csyr
Carlito syrichta (Philippine tarsier)
Pathway
csyr04151
PI3K-Akt signaling pathway
csyr04510
Focal adhesion
csyr04512
ECM-receptor interaction
csyr04820
Cytoskeleton in muscle cells
csyr04926
Relaxin signaling pathway
csyr04933
AGE-RAGE signaling pathway in diabetic complications
csyr04974
Protein digestion and absorption
csyr05146
Amoebiasis
csyr05165
Human papillomavirus infection
csyr05200
Pathways in cancer
csyr05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
csyr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
103276539 (COL4A2)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
103276539 (COL4A2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
103276539 (COL4A2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
103276539 (COL4A2)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
103276539 (COL4A2)
09154 Digestive system
04974 Protein digestion and absorption
103276539 (COL4A2)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
103276539 (COL4A2)
09162 Cancer: specific types
05222 Small cell lung cancer
103276539 (COL4A2)
09172 Infectious disease: viral
05165 Human papillomavirus infection
103276539 (COL4A2)
09174 Infectious disease: parasitic
05146 Amoebiasis
103276539 (COL4A2)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
103276539 (COL4A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
csyr04147
]
103276539 (COL4A2)
00536 Glycosaminoglycan binding proteins [BR:
csyr00536
]
103276539 (COL4A2)
Exosome [BR:
csyr04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
103276539 (COL4A2)
Glycosaminoglycan binding proteins [BR:
csyr00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
103276539 (COL4A2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
103276539
NCBI-ProteinID:
XP_021562620
Ensembl:
ENSTSYG00000000141
UniProt:
A0A3Q0DKJ9
LinkDB
All DBs
Position
Unknown
AA seq
1760 aa
AA seq
DB search
MAAPLGRTWRRAPRLLSARYRRQGSRGKAGHSCVQAEGPGRLSPATSVCKQRETRPKRLR
AHAWLLLGAVTVGFLARSASAGVKKFDVPCGGRDCSGGCQCYPEKGGRGQPGPVGPQGYN
GPPGLQGFPGLQGRKGDKGERGAPGITGPKGDVGARGVSGFPGADGIPGHPGQGGPRGRP
GYDGCNGTRGDAGPQGPPGSGGFSGPPGPQGPKGQKGEPYALSREDRDKYRGEPGEPGLV
GFQGPPGHPGPVGQMGPVGAPGRPGPPGPPGPKGQPGNRGLGFYGEKGEKGDMGQPGPNG
IPSDTIHPIIGPTKTTIHLDHYKGEKGSEGEPGIKGFPLKGEEGIMGFPGARGPPGFDGE
KGSPGQKGSRGLDGYQGSDGPRGPKGEAGDPGPPGPPAYSPHPSLAKGTRGDPGFPGGHG
EPGSRGEPGDQGPPGPPGLSIGDTDEKRGLPGEMGPKGFRGDVGVPARYPGPPGADGKPG
LRGLPGPAGQPGPDGFLFGLKGSEGGVGFPGPSGSPGARGHKGWKGDAGDCRCAEGDQFI
SRVPGLPGPKGFPGVNGEPGRKGDQGDPGQHGIPGFSGFKGAPGSTGPPGPKGAKGDSRT
ITTKGERGQPGIPGVPGVKGEDGVPGRVGLDGFPGLTGPPGDGIQGPPGDRGYPGAPGTK
GLPGEMGPPGLGLPGPKGQRGHPGDAGSRGPPGFPGPPGLPGAPGQIDCDTGVKRPIGGD
RQETVPPGCVGGPKGLPGLPGPPGLTGAKGPRGVPGFLGADGTPGLKGLPGDPGREGFPG
PPGFIGPRGSKGTVGLPGPDGSQGSAGLPGPAGPPGDRGLPGKVLGAQPGPRGDAGLPGH
PGLKGIPGERGPPGFRGSQGMPGMPGLKGQLGFPGPSGQPGLPGPPGQHGFPGGPGPEGP
LGLTGAPGLGGLPGDRGEPGDTGVPGPVGMKGVSGDRGDAGMSGEQGHRGNPGFKGMLGM
PGTPGLKGDRGSPGMDGFQGMPGLQGRPGFGGSKGEAGFFGIPGLKGLAGEPGVKGSRGE
PGLPGPPPVILPGMKDVKGEKGDEGPMGLKGYLGLKGLQGMPGIPGLSGVPGLPGRPGYV
KGVKGDIGVPGVPGLPGFPGVAGPPGIIGFPGFTGSRGEKGALGREGLYGETGPAGDFGD
IGDAVNLPGRTGLKGDRGGTGVPGLKGFFGEKGSEGNIGFPGIPGVTGVQGPPGLKGQTG
FPGLTGLQGPQGDPGRVGRPGDKGTHGWPGVPGLPGFPGIRGIGGLDGLPGTKGFPGPPG
TDVHGDPGFSGSPGDRGDPGEANTFPGPVGTPGQKGEQGAPGQRGRAGNPGLQGFPGITP
PSNISGIPGDKGAPGIFGPKGYQGPPGQPGPAALPGSKGDAGSPGTPGAPGTKGWVGDPG
SQGRPGVFGLPGEKGPRGEQGLMGNTGATGTVGDRGPKGPKGDRGFPGASGSVGAPGIAG
IPQKIAALPGTAGPRGRGGPPGAPGEMGPQGPPGEPGFRGAPGKAGPQGRGGVSAVPGFR
GGQGPLGHQGPIGQEGEPGRPGSPGLPGMPGRSVSIGYLLVKHSQTDQEPMCPVGMNKLW
SGYSLLYFEGQEKAHNQDLGLAGSCLARFSTMPFLYCNPGDVCYYASRNDKSYWLSTTAP
LPMMPVAEDNIKPYISRCSVCEAPAVAIAVHSQDVSIPHCPAGWRSLWIGYSFLMHTAAG
DEGGGQSLVSPGSCLEDFRATPFIECNGGRGTCHYYANKYSFWLTTIPEQSFQGSPSADT
LKAGLIRTHISRCQVCMKNL
NT seq
5283 nt
NT seq
+upstream
nt +downstream
nt
atggcggctcctttaggccggacgtggaggcgagccccacgtctgttgtcagcgcgctat
cggcggcagggaagtcgtgggaaagccggacacagctgtgtccaggctgagggcccaggg
cggctcagcccggccaccagcgtctgcaaacaacgcgaaacacgcccaaagcggctccgg
gcacacgcgtggctgctgctgggggcggtgactgtgggcttcctggcccggagcgcctcg
gcgggtgtgaagaagtttgatgtgccctgtggaggccgagactgcagtgggggctgccag
tgctaccctgagaaaggcggacgtggtcagcccggaccagtgggcccccagggctacaac
ggccccccggggctgcaaggcttcccgggactgcagggccgcaaaggtgacaagggtgag
cgaggcgctccaggaataaccggacccaaaggagacgtgggagcgagaggcgtttctgga
ttccctggtgccgatggaattcccggacatccagggcaaggtgggccccggggaaggccc
ggctacgatggctgcaacgggacccggggagacgcaggcccacaggggcctcccggctct
gggggcttctccggccctcctggaccccaaggacccaaaggacagaaaggcgagccttac
gcactgtctagagaagaccgcgacaaatacaggggtgaacctggggagcctggactggtt
ggtttccaggggccgcccggccaccctgggcctgtgggacagatgggtccagttggagcc
ccaggaagacccggaccacccggaccccctgggccaaaaggacagccaggcaacagagga
cttggtttttatggagaaaagggtgaaaagggggacatgggccagccaggacccaatggg
attccatcggacactatccatcccatcatcgggcccacgaagaccaccatccacctggat
cactataagggtgaaaaaggaagcgagggggagccaggaatcaagggcttccccttgaaa
ggcgaagagggtatcatgggctttccgggagccagggggccccccggcttcgatggtgaa
aaaggctcacctggacagaagggaagcagaggcctggacggttatcaaggctctgatggg
cccagaggacccaagggagaagcgggggacccaggaccccccggaccgcccgcctactcc
ccgcatccttccctagcaaaaggcaccagaggtgacccaggattcccagggggtcacggg
gagccaggaagccggggcgagccaggagaccagggtccaccaggcccccctggcttgtcc
atcggagacacagatgagaagagaggcctcccaggcgagatgggacccaaaggcttcaga
ggagatgtgggcgtccccgcgcgctaccccggcccacccggagctgacggaaagccaggc
ctccgaggactccccggacccgccgggcaacctggaccggatggtttcctgtttggcctc
aaagggtcagaaggaggagtaggcttccccgggccttctgggtcccctggggcccgagga
cacaagggctggaaaggtgacgctggagactgcaggtgcgccgagggtgaccagttcatc
agcagggtcccgggactgccgggacccaagggctttccgggtgtcaacggggagccgggg
aggaaaggggaccaaggagaccccggccagcacggcatccctgggttctcagggttcaag
ggagctcctggcagcactggcccgcccgggcccaaaggagccaagggagattctagaacc
atcacgaccaaaggtgagagaggacagcccggcatcccaggtgtgcccggggtgaaaggc
gaagacggcgtccctggacgtgttgggctcgacggattcccgggcctcacagggcctcct
ggtgatggtatccaaggccccccaggggaccggggctatcccggtgcacccggaacgaag
ggccttccaggagagatgggtcccccaggactgggcttgccgggccccaaaggccagcgc
ggtcaccccggagatgccggctcacgtggaccaccaggcttccccggccctcccggcctc
ccgggagccccaggacaaatagactgtgacaccggcgtgaagaggcccattggaggtgac
agacaggagactgtcccaccaggctgtgtcggagggcccaagggattgccaggcctgcca
ggacccccgggcctcacaggtgccaaaggccccagaggggtgccaggattcttgggagcg
gatggaacaccgggactcaagggcctcccgggagatcccggtcgtgaaggattcccagga
cccccaggcttcatcggaccccgaggatccaaaggcacagtgggcctccctggcccagac
ggatcccagggttccgctggcctgccagggccagccgggcctcccggggacagggggctt
cctggtaaagtcctgggtgcccagcccgggccccggggagacgctggcctgcctggccac
cccgggctgaaaggcattcccggagaaagaggcccacccggattcagaggaagccaaggg
atgccgggaatgccgggactgaagggccagctgggcttcccggggccttcaggccagcca
ggactacctgggcctccaggacaacacggatttccaggaggccctggcccagagggaccc
ttggggctgacaggtgccccaggccttggaggtctgcctggggacagaggggagcccggg
gacacaggcgtccccggccctgtgggcatgaaaggcgtctctggtgacagaggagatgct
ggcatgtcaggagagcaaggccatcgagggaaccctggatttaaaggaatgcttgggatg
cctggcacccctgggctgaaaggagacagaggctccccggggatggacggtttccaaggc
atgcctggactgcaaggacgacccggctttggaggaagcaaaggagaggctggatttttt
ggaattcctggtctgaagggtttggctggtgagccgggtgtcaaaggcagccgaggggag
cccggcctcccaggacctccccccgtcatcctgcccggaatgaaagacgtcaaaggggag
aagggcgatgagggcccgatggggctgaaaggctacctgggcttgaaaggtctccaagga
atgccagggatccctgggctatcgggcgtccctgggctgcctgggaggcccggctacgtc
aaaggagtcaagggagacatcggagtccccggtgtgccaggtttgccaggattccctgga
gtggctggccctcccggaattataggattcccggggttcacaggaagccggggtgagaag
ggtgctctgggcagagagggcctgtatggcgagaccggccctgctggagacttcggtgac
atcggggacgcggtaaatttaccaggaaggacaggcctgaagggagaccggggcggcact
ggagtaccaggtctaaagggattctttggagaaaagggctcagagggcaacatcggcttc
cccgggataccaggtgtgaccggagtccagggccctccaggacttaaaggacagacaggc
tttccaggactgaccgggctgcaggggccacaaggagacccagggagggtcggacgtcct
ggcgacaaaggaacccacggctggccaggggtgccaggcttgccaggcttcccggggatc
cgaggcatcggcggactcgatggcttacctggcaccaaaggcttcccaggacccccaggc
actgacgtccacggagacccaggcttctcaggctctcccggagacaggggtgaccccgga
gaggccaacacttttccaggccctgtgggcaccccgggacagaaaggcgagcagggagct
ccagggcaacgaggccgggccgggaatccagggcttcagggcttccccggcatcacgcct
ccttccaacatctctggaatccctggtgacaaaggcgctccagggatatttggcccgaaa
ggttaccagggccccccggggcaaccagggccagccgctcttcccggaagcaaaggagac
gcgggcagcccagggactcccggagccccggggaccaaaggatgggttggagaccccggg
tcccagggccggcccggtgtgttcgggctcccgggcgagaaagggcccaggggggagcaa
gggctcatgggaaacaccggggccaccgggactgtgggtgacagaggccccaagggaccc
aaaggagaccgaggattccccggtgcctccggctctgtgggcgcccccggcattgcagga
atcccccagaagatcgccgccctacccgggacagcaggtccccggggaaggggcggacct
cccggggcgccgggggagatggggccacagggcccccccggagagccaggtttccgcggg
gctccggggaaggccgggccgcagggaagaggcggcgtgtctgctgttcctggcttccgg
ggaggccaagggcccctgggccaccaggggccaatcggccaggaaggtgagccgggccgt
ccagggagcccgggcctgccgggcatgcccggccgcagcgtcagcatcggctacctgctg
gtcaagcacagccagacagaccaggagcccatgtgccccgtgggcatgaacaagctctgg
agcgggtacagcctgctgtacttcgaaggccaggagaaggcccacaaccaggacctgggg
ctggcgggctcctgcctggcccggttcagcaccatgcccttcctgtactgcaaccccggg
gacgtctgctactacgccagccgcaacgacaagtcctactggctgtccaccaccgccccg
ctgcccatgatgccggtggccgaggacaacatcaagccctacatcagtcgctgctctgtg
tgcgaggccccagccgtcgccatcgccgtccacagccaagacgtctccatcccccactgc
ccggctgggtggcgcagtctgtggattgggtattccttcctcatgcacaccgcagcaggg
gacgagggcggcggccagtcgctggtgtcgccgggcagctgtctggaggacttccgcgcc
acgcccttcatcgagtgcaacggtggccgggggacctgccactactacgccaacaagtac
agcttctggctgaccaccatccccgagcagagctttcagggctcaccctcggccgacacg
ctcaaggccggcctcatccgcacgcacatcagccgctgccaggtgtgcatgaagaacctg
tga
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