Carlito syrichta (Philippine tarsier): 103277108
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Entry
103277108 CDS
T07836
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin alpha-4-like
KO
K16493
protocadherin alpha
Organism
csyr
Carlito syrichta (Philippine tarsier)
Pathway
csyr04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
csyr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
103277108
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
csyr03036
]
103277108
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
csyr04515
]
103277108
Chromosome and associated proteins [BR:
csyr03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
103277108
Cell adhesion molecules [BR:
csyr04515
]
Cadherins
Protocadherins
103277108
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_FAT4_N
Ig_Cad99C_N
Ig_CLSTN
Cadherin_C_2
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
103277108
NCBI-ProteinID:
XP_008072729
UniProt:
A0A1U7UKF6
LinkDB
All DBs
Position
Unknown
AA seq
1262 aa
AA seq
DB search
MMLVARPGNSRSRRLLLFLLLVAAWEAGSGQLRYSVPEEAKHGTFVGRIAQDLGLELAQL
VPRLFRVASKGRGDLLEVNLQNGILFVNSRIDREELCGRSLECSIHLEVIVERPLQVFHV
EVEVRDINDNPPVFPTRQKNLFISETRALDSHFSLEGALDADVGVNALLTYRLSPSEYFS
LEVPNNDEQVKPLGLVLKKSLDREVSSQLLLVLKATDGGKPELTGTVELHITVLDVNDNA
PVFDKAVYHVKLLENARNGTLITRLNASDSDEGSNSHILYFFATDVSPNTEASFHIDSAS
GEVKVNGKIDFEETKLWKIQIEAVDKGNPPMFGHCTILVEVLDINDNPPELVVTSLSLPV
REDASVETVIALISVTDLDSGANGQVTCSLTPHVPFKLVSTFKNYYSLVLDGALDRESVS
AYQLVVTARDGGSPSRWATASVAVEVADVNDNAPAFAQPEYTVFVKENNPPGCHVFTVSA
RDADARENARVSYALVERRVGARALSSYVSVRAESGEVFALQPLDHEELQLLXFQVSARD
AGVPPLGAASRALAGSAGPGSALVDVNVYLIVAICAVSSLMVLTLLLYTALRCSAPPPEG
ACGPGKPPLVCSSAAGSWSSSRPRRQRVCSGEGPPKTDLMAFSPSVPPGSGSGDSGVQQI
FENRRGSGALRPLLSLLLLAFWEAGSGQLHYSVPEEAKHGTFVGRIAQDLGLELAQLVPR
LFRVASKGRGDLLEVNLQNGILFVNSRIDREELCGRSLECSIHLEVIVERPLQVFHVEVE
VRDINDNPPVFSLGEQRLLISESKQLDSRFPLEGASDADIEENALLTYRLSPNEYFSLES
STNSKQTKRLSLILKKSLDREKTPELNLLLTATDGGKPELTGTVRLFMRVLDVNDNDPEF
EQTEYKVSLMENAAKETLVIKLNATDQDEGVNGEVSYSLKAIKPSGRPLFTLDENNGEVR
VNGTLDYEENKFYEIEVQATDKGIPPMAGHCTIWVEILDANDNSPEVTVTSLSLPVREDA
SVETVIALISVTDLDSGANGQVTCSLTPHVPFKLAPTFKNYYSLVLDGALDRESVSAYQL
VVTARDGGSPSRLVDGGQAPQAASRALAGSAGPGSALVDVNVYLIVAICAVSSLLVLTLL
LYTALRCSAPPPEGACGPGKPPLVCSSAAGSWSSSRPRRQRVCSGEGPPKTDLMAFSPSL
SPGPNREGEGEKQEAVLKHSGQSHDVAVHSKGEKEKFVPYQLSNHSQNRIDSILTVMMDT
MY
NT seq
3789 nt
NT seq
+upstream
nt +downstream
nt
atgatgttagttgccagaccaggaaactcgagatcccggcgcctgctactctttcttctg
ctcgtcgcagcctgggaggcggggagcggccagctccgctactcggtcccggaggaggcc
aagcacggcaccttcgtgggccgcatcgcgcaggacctggggctggagctggcccagctg
gtgccgcgcctgttccgggtggcgtccaagggccgcggggaccttctggaggtgaatctg
cagaacggcattttgtttgtgaattctcggatcgaccgcgaggagctgtgcgggcggagc
ctggagtgcagcatccacctggaggtgatcgtggagcggccgctgcaggttttccacgtg
gaggtggaggtgagggacattaacgacaacccgccggtgttcccaaccagacaaaagaat
ctgtttatttccgaaacgagggctcttgactcccatttttcactagagggcgccttggat
gcagatgtcggggtcaacgcactgctgacttacaggctgagccccagtgaatatttctcg
ctggaggtaccaaacaacgacgagcaggtaaaacctctcggactggtactaaaaaaatct
ttagacagagaagtctcttcgcagcttctcttggtgctcaaagcaactgatgggggcaaa
cctgagctgacagggacggtagagttacacatcacagtgctggatgtaaatgacaatgcc
ccggtgtttgacaaagcagtctatcatgtaaaattactggaaaatgcaagaaacggtaca
ttgattactagacttaacgcctcggattcggatgagggttcaaacagccacattctttat
ttctttgcaactgatgtctcccctaacacagaagcctcttttcacatagattcagccagt
ggggaagtaaaagtaaatggaaaaatagattttgaggaaactaaattatggaagattcaa
atagaggcagttgacaaaggcaatcccccaatgtttggtcactgcacaatcttggtagaa
gtgttggacatcaatgataaccctccagagttagtagtaacatcgctatcactccctgtg
cgagaggatgcttcagtggagacggtcatcgccctgatcagtgtaactgaccttgactct
ggcgccaacggacaggtcacctgctccctgacgccccacgtccccttcaagctggtgtcc
accttcaagaattactactcgttggtgctggacggcgccctggaccgcgagagcgtgtcg
gcctaccagctggtggtgaccgcgcgcgacgggggctcgccctcgcggtgggccacggcc
agcgtggcggtggaggtggccgacgtgaacgacaacgcgcccgccttcgcgcagcccgag
tacacggtgttcgtgaaggagaacaacccgccgggctgccacgtcttcacggtgtcggcg
cgggacgcggacgcgcgggagaacgcgcgggtgtcgtacgcgctggtggagcggcgggtg
ggcgcgcgcgcgctgtcgagctacgtgtcggtgcgcgcggagagcggcgaggtgttcgcg
ctgcagccgctggaccacgaggagctgcagctgcttncgttccaggtgagcgcgcgcgac
gcgggcgtgccgcccctgggcgccgcgtcgcgggcgctggcgggctccgcgggccccggg
tccgcgctggtggacgtcaacgtgtacctgatcgtggccatctgcgcggtgtccagcctg
atggtgctgacgctgctgctgtacacggcgctgcggtgctcggcgccgccccccgagggc
gcgtgcgggccgggcaagcccccgctggtgtgctccagcgcggcggggagctggtcgtcc
tcgcggccgaggcggcagagggtgtgctcaggggagggcccgcccaagaccgacctcatg
gcttttagccctagtgttcctcctggttcgggatctggggacagtggcgttcaacagatt
ttcgagaatagaaggggatcgggcgctctgcgaccactgctctcgcttcttctcctcgcc
ttctgggaggcagggagcggccagctccactactcggtccccgaggaggccaagcacggc
accttcgtgggccgcatcgcgcaggacctggggctggagctggcccagctggtgccgcgc
ctgttccgggtggcgtccaagggccgcggggaccttctggaggtgaatctgcagaacggc
attttgtttgtgaattctcggatcgaccgcgaggagctgtgcgggcggagcttggagtgc
agcatccacctggaggtgatcgtggagcggccgctgcaggttttccacgtggaggtggag
gtgagggacattaacgacaacccgccagtgttctctctcggagaacaaaggctactgatt
tctgaatctaagcaattggactcgcgttttccgctagagggagcttctgacgctgatata
gaggagaatgctctattgacctacagactaagtccaaatgagtatttttctttagaatca
tcaacaaacagtaagcagactaaaagactgtcacttatattaaagaagtctctggataga
gagaaaactccggaacttaacttgctactgacagctacggacggggggaaaccggagctc
acgggcactgttcggttgttcatgagagtcttggatgttaacgataacgatcctgagttt
gagcagacggaatacaaggtgagcttgatggaaaacgctgctaaagaaactcttgtgata
aagttaaacgccacagatcaagacgaaggggtcaacggggaggtatcgtactccctgaaa
gcaatcaagcccagtggaagacccttatttacactagatgaaaataatggagaagtgagg
gtcaatggaactttagattatgaagaaaacaaattttatgaaattgaagttcaggccaca
gataaggggattcccccaatggcagggcactgtacaatctgggtagaaatcttagacgcc
aacgataactcccctgaagtgaccgtgacttccctgtccctccctgtgcgagaggatgct
tcagtggagacggtcatcgccctaatcagcgtaactgaccttgactccggcgccaacgga
caggtcacctgctccctgacgccccacgtccccttcaagctggcgcccaccttcaagaat
tactactcgttggtgctggacggcgccctggaccgcgagagcgtgtcggcctaccagctg
gtggtgaccgcgcgcgacgggggctcgccctcgcggctggtggacggcggccaggcgccc
caggccgcgtcgcgggcgctggcgggctccgcgggccccgggtccgcgctggtggacgtc
aacgtgtacctgatcgtggccatctgcgcggtgtccagcctgctggtgctgacgctgctg
ctgtacacggcgctgcggtgctcggcgccgccccccgagggcgcgtgcgggccgggcaag
cccccgctggtgtgctccagcgcggcggggagctggtcgtcctcgcggccgaggcggcag
agggtgtgctctggggagggcccgcccaagaccgacctcatggccttcagccccagtctt
tctcccggtcccaatagagaaggcgaaggggaaaagcaggaggcagttttaaagcattct
ggacagtcacatgatgtcgctgtacactcaaaaggtgaaaaagaaaaatttgttccgtac
cagctttccaaccattcacagaataggatcgactccatattgactgtaatgatggataca
atgtactaa
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integrated database retrieval system
