Cronobacter sakazakii Sp291: CSSP291_02525
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Entry
CSSP291_02525 CDS
T02461
Symbol
recB
Name
(GenBank) exonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
csz
Cronobacter sakazakii Sp291
Pathway
csz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
csz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CSSP291_02525 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csz03400
]
CSSP291_02525 (recB)
Enzymes [BR:
csz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
CSSP291_02525 (recB)
DNA repair and recombination proteins [BR:
csz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CSSP291_02525 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AGE85103
LinkDB
All DBs
Position
500842..504384
Genome browser
AA seq
1180 aa
AA seq
DB search
MTDEPAASLDPLRLPLTGERLIEASAGTGKTYTIAALYLRLLLGLGGEAAHPRPLTVEEL
LVVTFTEAATEELRGRIRSNIHELRVACLRGRTDDPLYQRLLDEIPDKPLAARTLLLAER
QIDEAAIFTIHGFCQRMLSLNAFESGMPFEQQLIEDESLLRYQACADFWRRHCYPLAKPL
ARVVCEQWDGPESLLRDVNSFLHGEAPKLKTPPPDDETIESRYENAIARIDEVKALWREN
AEELAALIQNSGVDKRSYSSRYLPAWLDQMAAWAQEETTSWQLPGALEKFAQSTLLEKTK
KGDAPRHAVFDAIDALLAEPFTIRDLLIARAMAEIRYTVAQEKRRRGELGFDDMLSRLDE
ALNQPGGEALAAAIRTRYPAAMIDEFQDTDPQQYRIFRRIWLGQQETTLLLIGDPKQAIY
AFRGADIFTYMRARGEVNAHYTLDTNWRSAPGMVESVNKIFSQMDNAFMFRDIPFLAVKP
AARNQSLRFTFAGKTQPAMKLWLMEGDGAGVSDYQQTMARVCAQQIRDWLSSGMKGEALL
WREERARPVQASDITVLVRNRIEANLVREALNALNIPSVYLSNRDSVFATQEALEMLWLL
QAVLAPEVETRLRSALAASMLGLDAPAIEALNENENAWDALVEEFDGYRQIWLRRGVMPM
LRALMTHRQVAENLLATPGGERRLTDILHLSELLQEASAQADSEYALVRWLAQHIAEPDA
SASSQQLRLESDKHLVQVVTIHKSKGLEYPLVWLPFIADFREQKQAFYHDRETFTPMLDL
SNAEESLELAEMERLAEDLRLLYVALTRSVWHCSLGVAPLFRRRGAKEGETDLHRSALGR
LIQQGEALDANGLRRCIEALCDENLALEIPGEPDNTPWMPPESAPPTLAARELQRRIIDE
WRVTSYSGLQQHGAGRALDLLPKLDLDGAGARDVPDEPVMSPHTFPRGASPGTFLHSLFE
EIDFTQPVSAEWVTQQLQLGGFDEAWQPVLSRWIDDVLSAPLNETGVSLNQLGAKDKQVE
LEFYVPIDAALRPEALDTLIRKHDPLSAQCPPLDFRQVRGMLKGFIDLVFRWQGRYYLLD
YKSNWLGDSPEAYTVEAMSQAMQTHRYDLQYQLYTLALHRYLRHRLPDYDYERHFGGVIY
LFLRGVTKEDPRQGIFTTRPAQALVTAMDALFAGAEEKAS
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatgagcccgcagcctcccttgatcccctccgcctgcccttaacgggcgagcgg
ttgatagaagcctctgctggcaccgggaaaacctataccatcgcagcgctgtatctgcgt
ctgctgttaggcctgggcggtgaggcggctcacccgcgcccgttaaccgttgaagagctg
ttagtcgtaacctttaccgaggccgcgacggaagagctgcgcgggcgtattcgcagcaat
attcacgaactgcgtgtggcctgcctgcgcgggcgcaccgacgatccgctctaccagcgg
ctgctggatgagattccggataaaccgctggcggcccgtacgttgctgctggcggagcga
cagatagacgaggcggccatctttaccattcacggcttctgccagcgcatgctgagcctg
aatgcctttgaatccgggatgccattcgagcagcagttaattgaagatgaatcgctgctg
cgttatcaggcctgcgccgatttctggcgtcgccactgttacccgctcgccaaacccctg
gcacgcgtggtctgcgaacagtgggacgggccggaatcgctgctgcgcgatgtaaacagc
tttctgcatggcgaagcgcctaagctcaaaacgccaccgccggatgacgaaacgattgaa
tcgcgctatgaaaacgcgatagcgcgtattgacgaggtcaaagccctgtggcgtgaaaac
gctgaagagctggcggcgctgattcagaattcgggcgtcgataagcgcagctacagcagc
cgttatttgcccgcgtggcttgaccagatggccgcctgggcgcaggaagagaccacttcc
tggcaactgccgggcgcgcttgagaaatttgcccagagcacgctacttgagaagaccaaa
aaaggcgatgcgccgcgccatgcggtgtttgatgcaatcgatgcgctgctggccgagcct
ttcaccatccgcgatctgctcattgccagagcgatggcggaaatccgctacaccgtcgcg
caggagaagcgccgccgcggcgagctgggctttgacgacatgctgagccgtcttgacgag
gcgctgaatcagccgggcggcgaggcgctggcggcggcgattcgcacccgttacccggcg
gcgatgatcgatgagtttcaggataccgacccgcagcagtaccgtattttccgtcgcatc
tggctgggccagcaagagaccacattgctgctcatcggcgacccgaaacaggcgatttac
gcgtttcgcggtgcggatatctttacttacatgcgggctcgcggcgaagtaaacgctcac
tatacacttgatacgaactggcgttcggcaccaggcatggtggagagcgtcaataaaata
ttcagccagatggataacgcgtttatgtttcgcgatatcccttttctggcagtgaagcct
gccgcgcgtaatcagtcgttgcgttttacttttgccgggaaaacacagcccgccatgaag
ctttggcttatggaaggcgacggcgcaggagtaagtgattaccaacaaacaatggcgcgc
gtctgtgcgcagcagatccgcgactggttaagctcaggtatgaagggtgaggcgctgttg
tggcgcgaagagcgtgcgagaccggttcaggcgtcagatattacggtgctggtgcgtaac
cgcatcgaagcgaatctggtgcgcgaggcgctgaatgcgttaaacattccctctgtttat
ctttctaaccgcgacagcgtcttcgccacccaggaggcgctggagatgctctggctgctc
caggccgtgctggcaccagaggtggagacgcggcttcgcagcgcgctggcggcaagtatg
ctcgggctggatgcgccagccattgaggcgctcaatgaaaatgaaaacgcctgggatgcg
ctggtagaggaattcgacggctaccggcagatctggctgcggcgcggcgtgatgccgatg
ctgcgcgcgctgatgacgcaccggcaggtggcggaaaatctgctcgccacaccgggcggc
gagcgcaggctgacggatattctccacctgagcgaattactccaggaggcttctgcgcag
gccgacagcgaatatgcgctggtgcgctggttagcccagcatatcgccgagccggacgcg
agcgcctccagccagcagttgcgtctggaaagtgataaacatctggttcaggtcgtcact
attcataaatcgaaagggcttgaatatccgctggtctggctgccctttattgccgatttc
cgcgagcagaaacaggccttttaccacgatcgcgagacgtttacgccgatgctcgatctg
agcaacgctgaagagagccttgaactggcggagatggagcggctggcggaggatttacgc
cttctgtatgtggcgctgacgcgctccgtctggcattgcagcctgggcgtggcgccgctg
tttcgccgccgtggcgcgaaagaaggcgaaaccgatctccaccgcagcgcgcttggcagg
ctgattcaacaaggcgaagcgctggatgcgaacggcctgcgtcgctgtattgaagcctta
tgcgatgaaaatctggcgctggagatcccgggcgagccggataacacgccctggatgccg
ccggaatctgctccgccgacacttgccgcacgtgagctgcaacgacgcattattgatgaa
tggcgcgtcaccagttattcaggtttacaacagcatggtgcagggcgcgcgctggacctg
ctgccgaagctggatctggacggcgcgggcgcgcgtgacgtgcctgatgaaccggtaatg
tcgccgcatacgtttccacgcggcgcgtcgccaggcactttcctgcacagcctctttgag
gagatcgattttacccagccggtatcagcggagtgggtaacgcagcagttgcaactgggc
ggtttcgacgaagcctggcagccggtcttgagccgctggatagatgacgtgttgagcgcg
ccgctgaacgagaccggcgtgtcgctgaatcagcttggcgcgaaagataaacaggtggag
ctggagttttacgtgccgattgacgccgcgctgcgccctgaggcgcttgacacgctgatt
cgcaagcacgacccgctttccgcgcagtgtccgccgctcgatttccgtcaggtgcgcggc
atgctgaaaggctttatcgatctggttttccgctggcaggggcgttattacctgctggat
tataaatcgaactggcttggcgacagcccggaagcgtatacggttgaagcgatgtcgcag
gcgatgcagacgcaccgttacgatctgcaatatcagctatacacgctggcgctgcaccgc
tatttgcgccatcgcctgccggattatgattacgagcgtcacttcggcggcgtgatttac
ctgtttttgcgcggcgtaacgaaagaggatccccgtcagggcatctttaccacgcgtccc
gcgcaggcgctggtcacggcaatggatgcgctgtttgccggcgcggaggagaaagcgtca
tga
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