Cronobacter sakazakii Sp291: CSSP291_07675
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Entry
CSSP291_07675 CDS
T02461
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
csz
Cronobacter sakazakii Sp291
Brite
KEGG Orthology (KO) [BR:
csz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
csz03016
]
CSSP291_07675
Enzymes [BR:
csz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
CSSP291_07675
Transfer RNA biogenesis [BR:
csz03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
CSSP291_07675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
S1CSD-TOTE-2
ODP
Motif
Other DBs
NCBI-ProteinID:
AGE86130
LinkDB
All DBs
Position
complement(1600822..1602756)
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AA seq
644 aa
AA seq
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MFQDNPLLAQLKQQLHSQTPRAEGVVKATEKGFGFLEVDAQKSYFIPPPQMKKVMHGDRV
IAVIHTEKEKESAEPEELIEPFLTRFVGRVQKKDDRLSIVPDHPLLKDAIPCRAERGVSH
DFQNGDWAVAEMRRHPLKGDRGFYAELTQFITFGEDHFVPWWVTLARHNLEREAPDGVAT
EMLDENLTREDLTALDFVTIDSASTEDMDDALYVEALDGDRLQLTVAIADPTAWIAEGSK
LDNIAKVRAFTNYLPGFNIPMLPRELSDDLCSLREGVQRPALVCRMIIDVDGAISDDIHF
FAATIESKAKLAYDDVSDWLEEKGEWQPGSEAIAAQIRLLQQICQRRSAWRTEHALVFKD
RPDYRFVLGEKGEVLDIVAEPRRIANRIVEESMIAANICAARVLRDKLGFGVYNVHAGFD
PASTEQLATLLKSHGMHVDANDVLTLPGFCKLRRELDAQPSGFLDSRIRRFQSFAEISTE
PGPHFGLGLEAYATWTSPIRKYGDMVNHRLLKAIIKGESAARPQDEATVQMAERRRLNRM
AERDVGDWLYARFLKDKAGTDTRFAAEIIDVSRGGMRVRLVDNGAVAFIPAPFLHAVRDE
LVCSQENGTVQIKGETVYKVTDVIDVTIAEVRMETRSVIARPVA
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaggataacccgctgcttgcgcagcttaaacagcaactgcattcccagacgccg
cgcgccgaaggggtagtaaaagccacggaaaaaggttttggtttccttgaggttgacgcg
cagaaaagctacttcattccgccgccgcagatgaagaaagtgatgcacggcgatcgcgtc
attgccgttatccatacggaaaaggaaaaagaatccgccgagcccgaagagcttatcgaa
cccttcctgacccgctttgtgggccgggtgcaaaagaaagacgatcgtctctctatcgtt
cccgatcatccgctgctgaaagacgccatcccgtgccgcgctgaacgcggcgtcagccat
gacttccagaatggcgactgggcggtggcggaaatgcgccgccatccgctgaaaggcgat
cgcggtttctacgcggaactgacacagtttattaccttcggcgaggaccatttcgtgccg
tggtgggtgacgctggcacgccacaatcttgagcgcgaagcgccggacggcgtggcgacc
gaaatgctggatgaaaacctgacgcgtgaagatttaaccgcgctcgatttcgtcaccatc
gacagcgccagcaccgaagatatggacgatgcgctgtatgtggaagcgctggatggcgac
cgcctgcaactgaccgtcgcgattgccgacccgaccgcgtggatcgccgaaggcagcaag
cttgataacatcgcgaaagtgcgcgcgttcaccaactacctgccgggctttaacatcccg
atgctgccgcgcgagctgtctgacgatctctgctcgctgcgtgaaggcgtgcagcgcccg
gcgctggtctgccgcatgattatcgacgtcgacggcgccatcagcgacgacattcacttc
ttcgccgccaccatcgaatcgaaagccaaactggcctatgacgacgtttccgactggctg
gaagaaaaaggcgagtggcagccgggcagcgaggcgattgccgcgcagatccgcctgctg
caacagatttgccagcgccgcagcgcctggcgtaccgaacacgcgctggtgtttaaagat
cgcccggattaccgctttgtgctgggcgagaaaggcgaagtgctggatatcgtggccgag
ccgcgccgcatcgctaaccgtatcgttgaagagtcgatgattgccgcgaacatctgcgcc
gcgcgcgtgctgcgagacaagctgggcttcggcgtttataacgtccacgcgggtttcgac
ccggcgagcaccgaacaactggcgacgctgctgaaaagccacggtatgcatgtggatgcg
aacgacgtgctgaccctgccgggcttctgcaagcttcgccgcgagctggacgcgcagcct
tccggcttcctcgacagccgcatccgccgtttccagtcgtttgcggaaatcagcaccgag
ccaggcccgcacttcggcctcggccttgaagcttacgcgacctggacctcgccgattcgt
aaatatggcgatatggtcaaccaccgcctgctgaaagccatcatcaaaggcgaaagcgct
gcgcgtccacaggatgaagccaccgtacagatggccgagcgccgtcgtctcaaccgcatg
gcggagcgcgacgtgggcgactggctgtatgcccgcttcctgaaagacaaagccggcact
gatacccgcttcgcggcggaaattatcgatgtcagccgcggcggcatgcgcgtgcgtctg
gtggataacggtgcggtcgcctttattcccgcaccgttcctgcacgcggtgcgcgatgaa
ctggtctgcagccaggaaaacggcaccgtacagatcaaaggcgaaaccgtttataaagtc
accgacgttatcgacgtgaccatcgccgaagtgcgtatggaaacccgcagcgtcatcgca
cgcccggtcgcctga
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