Cronobacter sakazakii Sp291: CSSP291_12675
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Entry
CSSP291_12675 CDS
T02461
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
csz
Cronobacter sakazakii Sp291
Pathway
csz03030
DNA replication
csz03430
Mismatch repair
csz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
csz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CSSP291_12675 (holA)
03430 Mismatch repair
CSSP291_12675 (holA)
03440 Homologous recombination
CSSP291_12675 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
csz03032
]
CSSP291_12675 (holA)
03400 DNA repair and recombination proteins [BR:
csz03400
]
CSSP291_12675 (holA)
Enzymes [BR:
csz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CSSP291_12675 (holA)
DNA replication proteins [BR:
csz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CSSP291_12675 (holA)
DNA repair and recombination proteins [BR:
csz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CSSP291_12675 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delt_C
DNA_pol3_delta
DNA_pol3_delta_C
DNA_pol3_gamma3
Hda_lid
Motif
Other DBs
NCBI-ProteinID:
AGE87118
LinkDB
All DBs
Position
2661000..2662031
Genome browser
AA seq
343 aa
AA seq
DB search
MLRLYPEQLRAQLNEGLRAAYLVLGNDPLLLQESQDAIHQQAQAHGFEEHHRFIIDVSTD
WQAIFSLCQAMSLFASRQTLLLALPENGPNAAINEQLATLVSLLHDDLLLIVRGNKLTKA
QENAAWITALSDRAVQITCQTPEQAQLPRWVANRAKQMNLQLDDAACQLLCYCYEGNLLA
LAQALERLSLIWPDGKLTLPRVEQAVNDAAHFTPFHWVDALLAGKSKRALHILQQLRQEG
AEPVILLRTLQRELLTLVTLKRQSANTPLRALFDQHRVWQNRRALISEALSRLSDDRLWQ
AVRLLTQCEITLKQDYGQNVWPELKSLSLVLCHKALAGVFIDD
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgctacggctttaccctgaacaactccgcgcgcagctcaacgaagggctgcgcgcggcc
tatttagtgctcggcaacgatccgttgctgctccaggaaagccaggacgccattcatcag
caggcgcaggcccacggatttgaagagcatcaccgcttcattattgatgtcagcaccgac
tggcaggcgattttctcgctctgtcaggcgatgagtctgttcgcaagtcgccagacgctt
ttgctggcgctgccggagaacggccctaacgcggccattaacgaacagctcgccacgctg
gtcagcctgctgcatgacgatctgctgctgattgtacgcggcaacaaactcacgaaagcc
caggaaaacgctgcctggataacggccctctccgaccgcgccgtgcagataacctgccag
acgccggagcaggcgcaactgccgcgctgggtcgcaaaccgggccaagcagatgaatctg
caactcgatgacgccgcctgtcagttgctctgctactgctacgaaggcaacctgctggcg
cttgcccaggcgctggagcggctgtcgcttatctggccggatggcaaactgacgctgccg
cgcgttgaacaggcggttaacgacgccgcgcattttacgccgttccactgggttgatgcc
ctgctggcgggaaaaagcaaacgcgcgctgcatattcttcagcagttacggcaggaaggt
gccgagccggtgattctgctgcgcaccttacagcgcgagctgttgacgctggtcacgctc
aaacgccagtcggcaaacacgccgctgcgcgcgctcttcgatcagcatcgcgtctggcag
aaccgtcgcgcccttatcagcgaggcgctctcgcgcctgagcgacgacaggctctggcag
gcggtgcgcctgctgacacagtgcgagatcacgctcaaacaggattatggtcagaatgtc
tggccggagctgaaaagcctctcgctggtgctgtgccacaaagcgctggccggagtgttt
attgatgactga
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