Cronobacter sakazakii Sp291: CSSP291_13835
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Entry
CSSP291_13835 CDS
T02461
Name
(GenBank) exonuclease subunit SbcC
KO
K03546
DNA repair protein SbcC/Rad50
Organism
csz
Cronobacter sakazakii Sp291
Brite
KEGG Orthology (KO) [BR:
csz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
csz03400
]
CSSP291_13835
DNA repair and recombination proteins [BR:
csz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CSSP291_13835
Archaeal homologous recombinant proteins
CSSP291_13835
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
nSTAND_NTPase5
ABC_tran
nSTAND3
AAA_15
cobW
AAA_21
AAA_14
ABC_ATPase
AAA_22
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
AGE87346
LinkDB
All DBs
Position
2904796..2907945
Genome browser
AA seq
1049 aa
AA seq
DB search
MKILTLRLKNLNSLKGEWKIDFTAEPFASNGLFAITGPTGAGKTTLLDAICLALYHRTPR
LNALSQSQNDLMTRDTAECLAEVEFEVKGVAWRAFWSQSRARGQPDGNLQAPRVELARCE
DGKIVADKIKDKLDRIAALTGLDYDRFTRSMMLSQGQFAAFLNAEAKARAELLEELTGTE
IYGQVSARIFEQHKEARSQLEKLESQAQGVRLLDEAQRESLTTGLQALTDEEKTLLARQR
QLQQEHLWLTQRTALASALDAARHAAAAADQALQAAAPDLARLEAALPAEKLRPAWLRCQ
ELETALTATGRQHEEVSVRLQESQQRRREIRQAAAQQAQAQTAELTQLGQWLTKHDRFRL
WSSELAGWRAVLAQQKRDRDQLRALNETLDATRRKRDALPDAGLTLSPEDAAQALAQLNE
QRPLRQKLATLQSSFAPLTRRKTRLQETNSALQTQIQHAEQQLAQKRQDYKTKQQEVERA
KAVCDLEQRIASLVEERARLQPGSPCPLCGATEHPAVEAYQALKPDASRLRLAQLEQEKE
QLGTEGAALRGQLDALMKQRQQQESEAASLLEEEQALTSQWQTLCAAAGLTQTPGDDLTP
WLDEQTRREQQLHLLRERQMLEATLEGTQRQVTSLEAAWQTQQAALRDQLDAFALPAPDN
DNPAPWFAEREEEARRWQQNHERQQRLREQLAACEALLTLLPQEGDAQAASLAADDLPRA
GQEMHTRCLSLEAQWQTLGAQLLQERARYQSAVQAFEAALAASPFADKAAFLAALLDDAT
RSHLEAQKQRLERERETQHTLLTQAQQALERHLGARPESLDEQADAQQSEAALAAVTEQL
RDNTTRQGELRQQLRQDEESRTQLAALLGQIDEARREADEWGQLNHLVGSQKGDKFRKFA
QGLTLDNLVWLANNQLTRLHGRYLLKRKLSEDLELEVVDTWQADAVRDTRTLSGGESFLV
SLALALALSDLVSHKTRIDSLFLDEGFGTLDAQTLDTALDALDALNASGKTIGVISHVEA
MKERIPVQIKVRKINGLGVSRLAREYQVD
NT seq
3150 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcttaaccctgcggctaaaaaacctgaactcgctgaaaggcgaatggaaaatc
gactttaccgccgaaccgttcgcgagcaacgggctcttcgccattaccggcccgaccggc
gcgggcaaaaccacgctgctcgacgccatctgccttgcgctctaccaccgcacgccgcgc
ctgaacgcgctgtcgcaaagccagaatgacctgatgacgcgcgacactgccgagtgtctg
gcggaagtggagtttgaagtcaaaggcgtcgcctggcgcgccttctggagccagagccgc
gcgcgcggccagccggacggcaacttacaggcgccgcgcgtggagctggcgcgctgcgaa
gacggcaaaatcgtcgccgataaaatcaaagacaaactcgacagaatcgcggcgttgacg
gggctggattacgaccgtttcacccgttcgatgatgctctcgcaggggcagtttgccgcg
tttctcaatgccgaggccaaagcgcgtgccgaactgctggaagagctgaccggcaccgaa
atctacggtcaggtctcggcgcgtattttcgaacagcataaagaagcccgcagccagctt
gagaagcttgaatcgcaggcgcaaggcgtgcggctgctggacgaagcgcaacgggaaagc
ttaaccacaggtttgcaggcgcttactgacgaggaaaaaacgctgcttgcccgccagcgc
cagttacagcaagaacacctgtggctgacgcagcgtaccgcgcttgccagcgcgctcgac
gcggcgcgccatgccgcagcggcggcagatcaagcactacaggccgccgcgccggatctc
gcacggcttgaagcggcgctaccggcggaaaaactgcgtccggcgtggctgcgctgtcag
gagctggaaaccgcccttaccgccaccggtcgccagcatgaagaagtaagcgttcgctta
caggaaagccagcagcgccgccgggagatccgccaggccgccgcgcaacaggcgcaggcg
cagacggcagaactcacgcaactcggccagtggctgacgaagcatgaccgctttcgcctc
tggagcagcgagctcgcgggctggcgcgcggtgctggcgcagcagaaacgcgaccgcgac
cagctacgcgcgctgaacgagacgctcgacgccacccgccgcaagcgcgacgcgctgccg
gacgccgggcttacgctttcgccggaggacgctgcgcaggcgctggcgcagcttaacgag
cagcgcccgctgcgccagaagcttgcaacgctccagtcatcctttgcgcccctgacgcgc
cgtaaaacgcgcctgcaggagacgaacagcgcgctgcaaacgcaaattcagcacgccgaa
cagcagctggcgcaaaagcgtcaggattacaaaaccaaacaacaggaggtggagcgcgca
aaagcagtctgcgatctggaacagcgtatcgcaagcctcgttgaagagcgcgcgcgcctg
caacccggcagcccctgcccgctgtgcggcgcgaccgagcacccggccgtggaggcgtat
caggcgctgaagcccgacgcgagccgcctgcgtcttgcgcaactggagcaggagaaagag
cagctcggcaccgagggcgcggcgctgcgcggccagctcgatgcgctgatgaaacagcgc
cagcagcaggaaagcgaagcggcaagcctgctggaagaagagcaagcgctcacctcacaa
tggcagacgctctgcgcggcggcagggctcacccagacaccgggcgacgatctcaccccc
tggcttgacgagcagacccgccgcgaacagcagttacacctgctgcgcgagcgtcagatg
ctggaggccacgcttgaaggcacgcagcgtcaggtcacatcgctggaagcggcctggcag
acgcagcaggcggcgctgcgcgaccagcttgacgccttcgccctgcccgccccggataac
gacaaccccgcgccgtggttcgccgaacgtgaagaagaggcgcgccgctggcagcaaaat
cacgagcgtcagcagcgcctgcgtgaacagcttgccgcctgcgaagcgctgctgaccctg
ctgccgcaggagggtgatgcgcaggcggcgtcgctcgccgcagacgacctgccgcgcgcg
ggccaggagatgcatacgcgctgtttatcgctggaagcgcagtggcagacgctcggcgcg
cagcttctccaagagcgcgcgcgctaccagagcgccgtgcaggcgtttgaggcggcgctc
gccgcaagcccgtttgcggacaaagcagcgtttctcgctgccctgctggacgacgccaca
cgcagccaccttgaagcccaaaaacagcggctggagcgcgagcgcgaaacgcagcacacg
ctgcttacgcaggcgcagcaggcgctggagcgccacctgggcgcgcgcccggaatcgttg
gatgaacaggctgatgctcagcagagcgaagccgcgctcgcggcggtcacggagcaactg
cgcgataacaccacgcgccagggggaactgcgccagcagttacgccaggatgaagagagc
cgtacgcaactggcagcgcttcttgggcagattgacgaggccaggcgcgaggccgacgaa
tggggccagctaaaccatctggtcggctcgcagaaaggcgataaattccgtaagttcgca
caagggctgacgctggataatctggtatggctcgccaataatcagctgacgcgcctgcat
ggccgctacctgcttaaacgcaagctgagtgaggatctggagctggaagtggtagacacc
tggcaggcggacgcggtgcgcgacacccgcacgctttccggcggcgaaagcttcctggtg
agtctcgcgctggcgctggcgctctcggatctggtgagccataaaacccgcatcgattcg
ctgtttctggatgagggtttcggcacgctggatgcgcagacgcttgatacggcgctggat
gcccttgacgcgctgaacgccagcggcaaaaccatcggcgtcatcagccacgttgaggcg
atgaaagagcgtatcccggtacagatcaaggtcagaaagattaacggccttggcgtgagc
cgcctggcgcgcgaatatcaggtcgattaa
DBGET
integrated database retrieval system
