Cronobacter sakazakii Sp291: CSSP291_14605
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Entry
CSSP291_14605 CDS
T02461
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
csz
Cronobacter sakazakii Sp291
Pathway
csz03030
DNA replication
csz03430
Mismatch repair
csz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
csz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CSSP291_14605 (dnaE)
03430 Mismatch repair
CSSP291_14605 (dnaE)
03440 Homologous recombination
CSSP291_14605 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
csz03032
]
CSSP291_14605 (dnaE)
03400 DNA repair and recombination proteins [BR:
csz03400
]
CSSP291_14605 (dnaE)
Enzymes [BR:
csz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CSSP291_14605 (dnaE)
DNA replication proteins [BR:
csz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CSSP291_14605 (dnaE)
DNA repair and recombination proteins [BR:
csz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CSSP291_14605 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
DNA_pol_IIIA_C
HHH_6
tRNA_anti-codon
MutS_II
Motif
Other DBs
NCBI-ProteinID:
AGE87494
LinkDB
All DBs
Position
complement(3062963..3066445)
Genome browser
AA seq
1160 aa
AA seq
DB search
MAEPRFVHLRVHSDYSMIDGLAKTGPLVKKAAALGMPAFAITDFTNLCGLVKFYGGAHGV
GIKPIIGADFNMQCELLGDDFSHITVLAANNTGYQNLTLLISRAYQRGYGAAGPWIDQQW
LAELGEGLILLSGGRQGDVGKCLLRGNNVMAEQALAFYQEHFPDRYYLELVRTGRPDEER
YLHAAVALAEEKGIPVVATNDVRFIEPGDFDAHEIRVAIHDGFTLDDPKRPRHYSPQQYL
RTEEEMCELFSDLPEALENSVEIARRCNVTVRLGEYFLPKFPTGDMTTEDFLVMKSKEGL
EERLEFLFPDPEVRAQKRPEYDERLDIELQVINQMGFPGYFLIVMEFIQWSKDNGIPVGP
GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMEKRDQVIEHVAD
MYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLVPPDPGMTLAKAFEAEPQ
LQEIYDADEEVKALIDMARKLEGVTRNAGKHAGGVVIAPTKITDFAPLYCDEMGHHPVTQ
FDKNDVEYAGLVKFDFLGLRTLTIINWALEMINARRAKQGLEPIDIAAIPLDDKKSFDML
QRSETTAVFQLESRGMKDLIKRLQPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREA
ISYPDIQWQHESLKPVLEPTYGIILYQEQVMQIAQVLSGYTLGGADMLRRAMGKKKPEEM
AKQRSIFEDGAKNNGIDGELAMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPA
EFMAAVMTADMDNTDKVVGLVDECWRMGLKILPPDINSGLYHFHVNDDGEIVYGIGAIKG
VGEGPIEAIIEARNKDGYFRELFDLCARTDTKKLNRRVLEKLIMSGAFDRLGPHRAALMN
SLGDALKAADQHAKAEAIGQADMFGVLAEEPEQIEQSYASCQPWPEQVVLDGERETLGLY
LTGHPINQYLKEIERYVGGMRLKDMHPTERGKVTTAAGLIIAARVMVTKRGNRIGICTLD
DRSGRLEVMLFTDALEKYQHLLEKDRILIVSGQVSFDDFSGGLKMTAREVMDIDEAREKY
ARGLAISLTDRQIDDQLLNRLRQSLEPHRSGTIPVHLYYQRADARARLRFGATWRVSPND
RLLNDLRGLIGSEQVELEFD
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaccgcgttttgtgcacctgcgagtgcacagtgactattccatgattgatgga
ctggcaaaaacggggccgctggtaaaaaaggcggccgcacttggcatgcctgcctttgcc
attactgacttcaccaacctgtgcgggctggtcaaattctacggcggcgcgcatggcgtc
ggcatcaagccgattatcggcgccgacttcaacatgcagtgcgagctgctgggcgacgat
ttctcgcatatcaccgtgctggcggcgaacaataccggctatcagaacctgacgctgctt
atctcacgcgcctaccagcgcggttacggcgcggctggcccctggatagaccagcagtgg
ctggcggagctgggcgaagggttgatcctgctctccggcggtcgtcagggtgatgttggc
aagtgtttacttcgtggtaataacgtcatggccgagcaggcgctggcgttttatcaggaa
catttcccggaccgctactatctggagctggtgcgtaccggccgtccggatgaagagcgg
tatttgcatgccgccgtcgcgctggcggaagaaaaaggcataccggtcgtcgccaccaac
gacgtgcgctttattgagcctggcgattttgacgcgcacgaaatccgcgtcgccatccac
gatggctttacgctcgatgatccgaaaaggccgcgccactattcgccgcagcaatatttg
cgtaccgaagaggagatgtgcgagctgttctccgatctcccggaggcgctggaaaacagc
gttgagatcgcccgtcgctgtaacgtgacggttcgtcttggcgaatatttcctgccgaaa
ttcccgactggcgacatgaccaccgaagatttcctggtcatgaaatcgaaagagggtctg
gaagagcgtcttgagttcctgtttcccgatccggaagtccgcgcgcagaaacgcccggaa
tatgatgagcgcctggatattgaactccaggtgattaaccagatgggcttccctggttac
ttcctgatcgttatggagtttatccagtggtcgaaggataacggtattccggttgggcct
ggccgtggttcgggcgcggggtcgctggtggcgtatgcgctcaaaatcaccgatctcgat
ccgctggaattcgacctgctgttcgaacgtttccttaacccggaacgtgtctccatgccc
gacttcgacgtcgacttctgcatggaaaaacgcgaccaggtgattgagcacgtggccgat
atgtacggtcgcgacgcggtttcccagattattaccttcggcaccatggcggcgaaagcg
gtgatccgcgacgtaggccgcgtgctggggcatccttacgggtttgtcgatcgcatctct
aaactggtgccacccgatccgggcatgacgcttgccaaagcgtttgaagccgaaccgcaa
ctgcaggaaatttacgatgccgatgaagaggtcaaagccctcatcgacatggcgcgcaag
ctcgaaggcgtaacgcgtaacgccggtaaacacgccggtggcgtggtgatcgcgccgacc
aaaatcaccgattttgcgccgctctattgtgacgagatggggcaccacccggtcacgcag
tttgataaaaacgacgtggaatatgcgggcctggtgaagttcgacttcttaggcctgcgc
acgctcaccattatcaactgggcgctggagatgattaacgcccgtcgtgcgaagcagggc
ctggagcctatcgacatcgcggccattccgctggatgacaagaaaagcttcgacatgctt
cagcgctcggaaaccaccgcggtcttccagcttgaatcgcgcggcatgaaagatctcatt
aagcgtctgcagccagactgcttcgaagatatgatagccctggtggcgctgttccgtccg
gggccgctgcagtcgggcatggtggataactttatcgaccgtaaacacggacgcgaagct
atctcttacccggatattcagtggcagcacgagagcctgaaaccggtgctggagccgacc
tacggcatcattctgtatcaggaacaggtgatgcagatagcccaggtgctttcagggtat
accctcggcggcgcggatatgctccgtcgtgcgatgggtaaaaagaaacccgaagagatg
gccaagcagcgctccatctttgaagacggcgcgaaaaacaacggcatcgacggcgagctg
gcgatgaaaatctttgacctggtggagaaattcgccgggtacggatttaacaaatcgcac
tctgccgcctatgctttggtgtcataccagacgctgtggctcaaagcccactatccggcg
gagtttatggcggcggttatgaccgccgatatggacaacaccgataaagtggtggggctg
gtggatgagtgctggcgcatggggcttaagatcctgccgccggatatcaactccgggctg
taccatttccacgtcaacgacgacggggagattgtctacggtattggcgcgatcaaaggc
gttggcgaaggccctatcgaggccatcatcgaggcgcgtaataaagacggctacttccgc
gagctgttcgatctctgcgcccgtaccgacaccaaaaagcttaaccgccgcgtgctggag
aaactgatcatgtccggggcgtttgaccgcctcggaccgcaccgcgccgcgctgatgaat
tcgctcggcgacgcgctgaaagcggcggatcaacatgcgaaagccgaggccatcggccag
gcggatatgttcggcgtgctggcggaagagccggagcaaatcgagcaatcctacgccagc
tgtcagccgtggccggagcaggtggtgctggatggcgagcgcgaaacgctggggctgtat
ctcaccggtcaccccatcaaccagtacctgaaagagatcgagcgttatgtcggcggcatg
cgcttaaaggatatgcatcctaccgagcgtggcaaagtgaccacggcggcgggtttgata
attgccgcgcgggttatggtcaccaagcgcggcaatcgtatcggcatctgtacgctggat
gaccgttccgggcgtcttgaagtgatgttgttcactgacgctctggaaaaataccagcat
ctgctggaaaaagaccgaatccttatcgtcagcggacaggtcagctttgatgacttcagc
ggtggccttaaaatgaccgcccgcgaagtcatggacattgacgaagcccgcgaaaagtat
gcgcgtgggcttgctatctcgctgacggacaggcaaattgatgaccagcttttaaaccga
ctccgtcagtctctggaaccccaccgttcgggaaccattccagtacatctctactatcag
agggcggatgcacgcgcccggctgcgctttggcgcgacgtggcgtgtctctccgaacgat
cgtttactcaacgatctgcgtggcctgattggttcagagcaggtggaactggagtttgac
tga
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