Cronobacter sakazakii Sp291: CSSP291_14775
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Entry
CSSP291_14775 CDS
T02461
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
csz
Cronobacter sakazakii Sp291
Brite
KEGG Orthology (KO) [BR:
csz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
csz03016
]
CSSP291_14775
Enzymes [BR:
csz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
CSSP291_14775
Transfer RNA biogenesis [BR:
csz03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
CSSP291_14775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
AGE87528
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All DBs
Position
3107023..3107553
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AA seq
176 aa
AA seq
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MSDQKRLFFALPLPADLQQQIIEWRAAHFAPDAGRPIAAANLHITLAFLGDVSAQKQRTL
SELAGRIQQPGFTLTLDDAGHWPRSQVVWLGSRQPPRGLLQLANLLRAQAARSGCPQSAQ
PFHPHVTLLRNAQHPVRLPPPGFGWQLPVREFVLYESRFEQGRTRYQPLQRWSLNP
NT seq
531 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaccagaaacggctgtttttcgcgctgcccctgccagccgaccttcagcaacag
attatcgagtggcgcgccgcacactttgcgccggacgcgggcaggccgattgccgccgcc
aatttgcatatcacgctcgcgtttttaggtgacgtcagcgcgcagaaacagcgcacgtta
agcgagcttgcggggcgcattcagcagccggggtttacgcttacgctggacgacgccgga
cactggccgcgctcgcaggtcgtctggctcggctcccgccagccgccgcgcggcctgttg
cagctcgcgaatttactgcgcgcgcaggcggcgcgcagtggttgcccacaaagcgcgcaa
ccctttcatccgcatgtcacattactgcgtaacgctcagcacccggtcaggctgccgccg
ccagggtttggctggcagcttccggtgcgggagtttgtgctgtatgaatcgcgatttgaa
cagggacgtacccgttaccagccgctgcaacgctggtctctgaacccataa
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