Cronobacter sakazakii Sp291: CSSP291_16515
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Entry
CSSP291_16515 CDS
T02461
Name
(GenBank) polynucleotide phosphorylase/polyadenylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
csz
Cronobacter sakazakii Sp291
Pathway
csz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
csz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CSSP291_16515
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
csz03019
]
CSSP291_16515
03016 Transfer RNA biogenesis [BR:
csz03016
]
CSSP291_16515
Enzymes [BR:
csz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
CSSP291_16515
Messenger RNA biogenesis [BR:
csz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CSSP291_16515
Transfer RNA biogenesis [BR:
csz03016
]
Prokaryotic type
tRNA degradation factors
CSSP291_16515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
RNase_PH_C
KH_1
S1_2
OB_RRP5_4th
aRib
KH_2
S1_RRP5
KH-I_KHDC4-BBP
KH_SLS1_2
Spt6_S1
Motif
Other DBs
NCBI-ProteinID:
AGE87872
LinkDB
All DBs
Position
complement(3500453..3502588)
Genome browser
AA seq
711 aa
AA seq
DB search
MLNPIVRKFQYGQHTVTLETGMMARQATAAVMVSMDDTAVFVTVVGAKKAKPGQDFFPLT
INYQERTYAAGRIPGGFFRREGRPSEGETLIARLIDRPLRPLFPEGFVNEVQVIATVVSV
NPQVNPDIVAMIGASAALSLSGIPFNGPIGAARVGYINDQYVLNPTQDELKSSKLDLVVA
GTESAVLMVESEAELLSEDQMLGAVVFGHEQQQVVIQNINDLVKEAGKPRWDWQPEAANE
ALNARVKALAESRLSDAYRITDKQERYSQIDAIKADVIAALQAEQAEGDALDENELGDIL
HAIEKNVVRSRVLAGEPRIDGREKDMIRGLDVRTGVLPRTHGSALFTRGETQALVTATLG
TERDAQNIDELMGERTDRFLFHYNFPPYSVGETGMVGSPKRREIGHGRLAKRGVLAVMPA
ADRFPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLVKEGENFVV
LSDILGDEDHLGDMDFKVAGSREGITALQMDIKIEGITKEIMQVALNQAKGARLHILGVM
EQAINAPRGDISQFAPRIHTIKISPDKIKDVIGKGGSVIRALTEETGTTIEIEDDGTVKI
AATDGEKAKHAIRRIEEITAEIEVGRIYNGKVTRIVDFGAFVAIGGGKEGLVHISQIADK
RVEKVTDYLQMGQEVPVKVLEVDRQGRVRLSIKEATEQTQEAAAPAAPEAE
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
ttgcttaatccgatcgtccgcaaatttcagtatggtcaacatactgtcactcttgaaacc
ggaatgatggctcgtcaggccactgctgccgtgatggtaagcatggatgacactgcggta
ttcgtgaccgtagttggcgctaaaaaagcgaagccgggccaggactttttcccgctgacc
attaactatcaggagcgtacctacgctgctggccgcatcccgggcggcttcttccgtcgc
gaaggccgtccgagcgaaggcgaaacgctgatcgcgcgtctgattgaccgcccgctccgc
ccgctgttcccggaaggcttcgttaacgaagttcaggttatcgcgaccgtcgtttccgtt
aacccgcaggttaaccctgatattgttgcgatgatcggcgcgtccgctgcgctgtctctg
tccggtattccgttcaacggcccgattggtgccgcgcgcgtgggttacatcaacgaccag
tacgtactgaacccgacccaggatgagctgaaatccagcaaactggatctggttgtcgct
ggtactgaaagcgccgtgctgatggtggaatctgaagctgaactgctgagcgaagatcag
atgctgggcgccgtggtgttcggccacgagcagcagcaggttgtgattcagaacatcaac
gatctggtgaaagaagcgggcaaaccgcgctgggactggcagcctgaagccgctaacgaa
gcgcttaacgcgcgcgtgaaagcgctggctgaatctcgtctgagcgacgcgtaccgcatc
actgacaaacaagaacgttacagccagatcgacgctatcaaagcagacgttatcgcggca
ctgcaggctgaacaggccgaaggcgacgcgcttgacgaaaacgagctgggcgacatcctg
cacgctatcgagaagaacgttgttcgttctcgcgtactggctggcgaaccgcgtatcgat
ggtcgcgaaaaagacatgatccgtggcctggacgtgcgcactggcgtactgccgcgtact
cacggttccgcgctcttcacccgtggtgaaacgcaggcgctggttaccgcgacgctcggt
actgaacgcgacgcgcagaacatcgacgaactgatgggcgagcgtactgaccgcttcctg
ttccactacaacttccctccgtactctgtcggcgaaaccggcatggttggttctccgaag
cgtcgtgaaatcggtcacggtcgtctggcgaaacgcggcgtactggcagtcatgccggca
gctgaccgcttcccgtacaccgtccgcgtggtgtctgaaatcaccgaatccaatggttct
tcttccatggcttccgtgtgtggcgcttctctggcgctgatggacgcgggcgtgccgatt
aaagccgctgtcgcgggtattgcgatgggtctggtgaaagaaggcgaaaactttgtcgta
ctgtccgatattctgggtgatgaagaccacctgggcgacatggacttcaaagtagccggt
tcccgtgaaggtatcactgcgctgcagatggatatcaaaatcgaaggcatcactaaagag
atcatgcaggtggcgctgaatcaggctaaaggtgcgcgtctgcacattcttggcgtgatg
gaacaggctatcaacgcaccgcgtggcgatatctctcagttcgcaccgcgtattcacacc
atcaagatcagcccggacaagatcaaagacgtgatcggtaaaggcggctctgtgattcgt
gcgctgactgaagaaaccggcactaccatcgaaatcgaagatgacggcacggtgaaaatt
gcagcgaccgatggcgagaaagcaaaacacgcaattcgtcgtatcgaagagattaccgct
gaaatcgaagtgggccgtatctacaatggtaaagtgacccgcatcgttgacttcggtgcc
ttcgtcgctatcggcggcggtaaagaaggtctggtacatatctctcagatcgccgacaag
cgcgttgagaaagtgaccgactatctgcagatgggtcaggaagtaccggttaaggtactg
gaagttgaccgtcagggccgtgtacgtctgagcatcaaagaagcaaccgagcagactcag
gaagcagcagcccctgctgcgccggaagccgagtaa
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