Cronobacter sakazakii Sp291: CSSP291_16695
Help
Entry
CSSP291_16695 CDS
T02461
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
csz
Cronobacter sakazakii Sp291
Pathway
csz02020
Two-component system
csz02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
csz00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
CSSP291_16695
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CSSP291_16695
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
csz03021
]
CSSP291_16695
Transcription machinery [BR:
csz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CSSP291_16695
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
DUF6189
Motif
Other DBs
NCBI-ProteinID:
AGE87908
LinkDB
All DBs
Position
3534216..3535655
Genome browser
AA seq
479 aa
AA seq
DB search
MKQGLQLRLSQQLAMTPQLQQAIRLLQLSTLELQQELQQALESNPLLEQTDIHDEIATQE
TQDSEGLDTAEALEQKEMPDELPLDASWDEIYTAGTPSGTGTDYIDDELPVYQGETTQSL
QDYLMWQVELTPFSDTDRAIATAIVDAVDDTGYLTVTVQDILDGMGDSDGDIGLEEIEAV
LKRVQRFDPVGVAARDLRDCLLIQLSQFSAETPFLAQARQIVSDHLDLLANHDFRSLMRV
TRLKEDVLKEAVNLIQSLDPRPGQSIQTGEPEYVIPDVLVRKHNGRWTVELNADSIPRLK
INQQYAAMSGSARNESDSQFIRSNLQEAKWLIKSLESRNDTLLRVSRCIVEQQQAFFEQG
EEYMKPMVLADIAQAVEMHESTISRVTTQKYLHSPRGIFELKYFFSSHVNTEGGGEASST
AIRALVKKLIAAENPAKPLSDSKLTSMLSEQGIMVARRTVAKYRESLSIPPSNQRKQLV
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaaggtttgcaactaaggcttagccaacagctcgccatgacgccgcagttgcag
caggccattcgcttgttgcaattgtccacgctggagcttcagcaggagctgcaacaggcg
ctggagagtaatcccctgcttgaacaaaccgacattcacgacgaaattgccactcaggaa
acgcaggacagcgaagggctggacaccgccgaagcgctggagcaaaaagagatgccggac
gagctgccgcttgatgccagctgggacgaaatctacaccgcgggtacgccttcaggcacc
ggcaccgactatatcgacgacgaactgcccgtttatcagggcgaaaccacccagagcctg
caggattacctgatgtggcaggtggagctgacgccgttttccgataccgatcgcgccatc
gccacggcgatcgtcgacgcggtggacgacaccggctatctcaccgtgacggtgcaggat
atcctcgacggcatgggcgacagcgatggcgatatcggcctcgaagagatcgaagccgtg
cttaagcgcgttcagcgtttcgatccggtcggcgtcgccgcccgggatctgcgcgattgc
ctgctgatccagctttcgcagtttagcgccgaaacgccttttcttgcccaggcgcgccag
atagtcagcgatcacctcgacctgctggccaaccatgatttccgcagcctgatgcgcgtt
acgcgccttaaagaagatgtgctcaaagaagccgttaatctgatccagtcgctcgatccg
cgccccggccagtcgatccagaccggcgagccggaatatgttattcccgatgtgctggtg
cgcaagcataacggccgctggacggtcgagcttaacgccgacagcattccccggcttaaa
atcaatcagcagtacgccgccatgtcaggcagcgcgcgcaatgaatccgacagccagttc
atccgcagcaacctccaggaagccaaatggcttatcaaaagcctggagagtcgtaacgac
acgctgttgcgcgtcagccgctgtatcgtcgaacagcaacaggcgttctttgagcagggc
gaagagtatatgaagccgatggtgctggcggatatcgcgcaggcggtcgagatgcatgaa
tcgaccatctcccgcgtcaccacgcaaaaatatctgcacagcccgcgcggcatctttgaa
ttaaagtattttttctcaagccacgtgaacaccgagggcggcggcgaagcctcgtccacg
gctatccgcgcgctggtgaaaaagttgattgcagcggagaaccccgcgaaacccttaagc
gacagcaagttaacatctatgctgtcagaacaggggatcatggtggcccgccgtaccgtt
gcgaagtatcgagaatctttatccataccgccgtcaaaccagcgcaaacagctggtctga
DBGET
integrated database retrieval system