KEGG   Cronobacter sakazakii Sp291: CSSP291_16695
Entry
CSSP291_16695     CDS       T02461                                 
Name
(GenBank) RNA polymerase factor sigma-54
  KO
K03092  RNA polymerase sigma-54 factor
Organism
csz  Cronobacter sakazakii Sp291
Pathway
csz02020  Two-component system
csz02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:csz00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    CSSP291_16695
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    CSSP291_16695
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:csz03021]
    CSSP291_16695
Transcription machinery [BR:csz03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     CSSP291_16695
SSDB
Motif
Pfam: Sigma54_DBD Sigma54_CBD Sigma54_AID DUF6189
Other DBs
NCBI-ProteinID: AGE87908
LinkDB
Position
3534216..3535655
AA seq 479 aa
MKQGLQLRLSQQLAMTPQLQQAIRLLQLSTLELQQELQQALESNPLLEQTDIHDEIATQE
TQDSEGLDTAEALEQKEMPDELPLDASWDEIYTAGTPSGTGTDYIDDELPVYQGETTQSL
QDYLMWQVELTPFSDTDRAIATAIVDAVDDTGYLTVTVQDILDGMGDSDGDIGLEEIEAV
LKRVQRFDPVGVAARDLRDCLLIQLSQFSAETPFLAQARQIVSDHLDLLANHDFRSLMRV
TRLKEDVLKEAVNLIQSLDPRPGQSIQTGEPEYVIPDVLVRKHNGRWTVELNADSIPRLK
INQQYAAMSGSARNESDSQFIRSNLQEAKWLIKSLESRNDTLLRVSRCIVEQQQAFFEQG
EEYMKPMVLADIAQAVEMHESTISRVTTQKYLHSPRGIFELKYFFSSHVNTEGGGEASST
AIRALVKKLIAAENPAKPLSDSKLTSMLSEQGIMVARRTVAKYRESLSIPPSNQRKQLV
NT seq 1440 nt   +upstreamnt  +downstreamnt
atgaagcaaggtttgcaactaaggcttagccaacagctcgccatgacgccgcagttgcag
caggccattcgcttgttgcaattgtccacgctggagcttcagcaggagctgcaacaggcg
ctggagagtaatcccctgcttgaacaaaccgacattcacgacgaaattgccactcaggaa
acgcaggacagcgaagggctggacaccgccgaagcgctggagcaaaaagagatgccggac
gagctgccgcttgatgccagctgggacgaaatctacaccgcgggtacgccttcaggcacc
ggcaccgactatatcgacgacgaactgcccgtttatcagggcgaaaccacccagagcctg
caggattacctgatgtggcaggtggagctgacgccgttttccgataccgatcgcgccatc
gccacggcgatcgtcgacgcggtggacgacaccggctatctcaccgtgacggtgcaggat
atcctcgacggcatgggcgacagcgatggcgatatcggcctcgaagagatcgaagccgtg
cttaagcgcgttcagcgtttcgatccggtcggcgtcgccgcccgggatctgcgcgattgc
ctgctgatccagctttcgcagtttagcgccgaaacgccttttcttgcccaggcgcgccag
atagtcagcgatcacctcgacctgctggccaaccatgatttccgcagcctgatgcgcgtt
acgcgccttaaagaagatgtgctcaaagaagccgttaatctgatccagtcgctcgatccg
cgccccggccagtcgatccagaccggcgagccggaatatgttattcccgatgtgctggtg
cgcaagcataacggccgctggacggtcgagcttaacgccgacagcattccccggcttaaa
atcaatcagcagtacgccgccatgtcaggcagcgcgcgcaatgaatccgacagccagttc
atccgcagcaacctccaggaagccaaatggcttatcaaaagcctggagagtcgtaacgac
acgctgttgcgcgtcagccgctgtatcgtcgaacagcaacaggcgttctttgagcagggc
gaagagtatatgaagccgatggtgctggcggatatcgcgcaggcggtcgagatgcatgaa
tcgaccatctcccgcgtcaccacgcaaaaatatctgcacagcccgcgcggcatctttgaa
ttaaagtattttttctcaagccacgtgaacaccgagggcggcggcgaagcctcgtccacg
gctatccgcgcgctggtgaaaaagttgattgcagcggagaaccccgcgaaacccttaagc
gacagcaagttaacatctatgctgtcagaacaggggatcatggtggcccgccgtaccgtt
gcgaagtatcgagaatctttatccataccgccgtcaaaccagcgcaaacagctggtctga

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